Cyprinodon variegatus (sheepshead minnow): 107083207
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Entry
107083207 CDS
T06110
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg02010
ABC transporters
cvg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107083207 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107083207 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107083207 (cftr)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
107083207 (cftr)
Transporters [BR:
cvg02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
107083207 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
AAA_29
SMC_N
RsgA_GTPase
AAA_16
DUF87
MMR_HSR1
AAA_23
T2SSE
Dynamin_N
FtsK_SpoIIIE
nSTAND3
Zeta_toxin
MeaB
nSTAND1
Motif
Other DBs
NCBI-GeneID:
107083207
NCBI-ProteinID:
XP_015227709
Ensembl:
ENSCVAG00000010219
LinkDB
All DBs
Position
Unknown
AA seq
1572 aa
AA seq
DB search
MERVREIVRRGGGKGGGRQGGGEGRGGRGGRGINRGGINGRGRDGGHAGGRGRQERAQRG
PNLTNEIRATLVDHVVNHGLTMREAGLWIYPLLRKGFTKKLELTDVYKAPSFDLADTLSE
RLEREWDKEVVLAKGRPKLLKALARCFFLPFAFFGVLLYLGEASKTVQPQLSGRIIASFD
PFHAPERSQGYYLALGLGLLFTARFILLQPAIYGLHHLGMQIRIALFSLIYKKTLKLSSK
VLDKISTGQLVSLMSANLNKLDESLGLAHFVWITPLQCILCTGLIWELIEVNGFCALASL
TLLGILQAWLSLKMGPPRAARAGLINRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQ
DEMTLTRKIGSLRYFYSASYFFSAILVIVSAIVPHALSNGIILRRIFTTASYCVVLRMTL
TRQLPGSIQMWYDTLTLVKKIEDFLLKEEYKIMDYSLTTVGLELVNVSASWDEGIVELFE
KIKRENKANGHLTGDDGLFFTNLYVTPVLKNISLHLEEGMMLAVAGSTGSGKSSLLMMIL
GELIPSEGKIRHSGRISYSPQTSWIMPGTIRDNILFGLTYDEFRYTSIIRACQLEEDFES
LPEKDKTPIAEGGVTLSGGQRARICLARAVYKDADLYLLDAPFTHLDIPTEKEVFDKCVC
KLMASKTRVVVTSKLEHLKRADRILLLHNGDCYFYGTFSELQAQRPDFSSLLLGLEAYDN
INAERRSSILTETLRRVSVDETAGFRGTDPNRQSFRHAPPHSHTVGDGYPEKRKPSLILN
PLAAARKFSFIGNSQQTNNYQSATMEDGVHDLSERRFSVVPEDDQVEEALPRGNMYHHGL
QHLNDRRQSVLAFITNAQGHERREQMQSSFRKKLSITPQCNLASELDIYARRLSKDSVFD
ISEEVDEEDMEECFADEREDIFETTSWSTYLRYVSTNRSLIYVLIFIVIVFAIEVAGCVI
GIFLITDEIWRDGANPNSPNYIDEQHPNASSTPVHLAVIVTPTSTYYIIYIFFAHSDSIL
ALGVFRGLPLVHTLLTVSKRLHEQMLSSVLRAPMSVLNTMKTGRIMNRFTKDMAVIDDML
PLVLFDLIQLTLLVIGCIFTVSIMRPYIFISAIPLAVIFVVLRKYFLRTGQQLKQLEAEA
RSPLFSHLIISLKGLWTIRAFGRQTYFETLFHKALNTHTATWFHYLSTLRWFLFRCDVIF
VLFFTAAAFIAVGTNQDRPGEIGIIVALAMLILGTFQWAIITSINVDGLMRSVDRVFKFI
DLVSEESFQGKPRGKGGSSLVINNPNAYNHWPNRGQLDVQHLTVKYTEAGRAVLNDISFS
VEGGQSVGLLGRTGSGKSTLLSALLGLTYTDGEMLIDGVSSSSMPVQTWRKAFGVVPQKV
FILTGTFRMNLDPYGRYSDDELWRVAEEVGLKSVIEQFPDKLDFELKDGGSVLSNGHKQL
MCLARSILSKARILLLDEPSSYLDPITLQVLRKTLKQSFSGCTVILSEHKVEPLLECQSF
LMIEKNGVKSYESIQKLMNEMSHLKQAISPADRLRLFPTPHRLNSIKRPQPQTTKISSLP
EEAEDEIHDTRL
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagtcagagaaatagtaagacgaggtggaggaaaaggaggaggacgacaagga
ggaggagaaggacgaggaggaaggggaggaagaggaatcaacagaggaggaatcaacgga
agaggaagagatggaggccatgctggaggtagaggaagacaagaacgtgctcaaagagga
ccgaatctgacaaatgagatccgcgcaacactggttgaccacgttgtcaaccacggcctg
acgatgagggaggctggactgtggatatacccgctcctgaggaaaggtttcactaaaaag
ttggagctgaccgacgtgtataaggctccttcttttgatctggctgacaccctctccgag
agacttgaaagggaatgggacaaagaggtggtgttagccaaaggcaggccaaagctgctg
aaagcactggcccgatgcttcttcctcccgtttgccttctttggggtcctcctctacctc
ggggaggcgtcaaagactgtgcagcctcagctttcaggtcgcatcattgcttcctttgat
cccttccacgcaccagaacgaagtcagggatactatttggccctgggtcttggcctcctc
ttcaccgctcgcttcatcctgttgcagcccgccatctatggccttcatcacctcggcatg
cagattcgcatcgcccttttcagccttatatacaaaaagactctgaagctgtctagtaaa
gtcttggataagatcagcacagggcagctcgtcagcctgatgtcagccaacctcaacaag
ctggatgagagcctgggactggcacactttgtgtggatcacacctctgcagtgtattctg
tgtactggtctgatctgggagctgattgaggtgaacggattctgtgccctggcatctctg
actcttcttggcattctccaagcctggctctccctcaagatggggcctccccgggcggcg
cgtgctggcctgattaaccgacgtctggctcttacatccgagatcgtggagaacattcac
tctgtgaaggcgtatggctgggaggaagtgatggaaacaatcatcaagaacattagacag
gatgaaatgactctaaccagaaagattggatcactgcggtatttctacagtgcatcctac
tttttttctgccatactggtcatcgtgtcggccattgtgccgcacgcgctcagtaacggc
attatactgcggcggatttttaccacggcgtcatactgcgtggtgttacgtatgacactc
acccggcagctcccgggatccatccagatgtggtacgacacgctgacgttggtcaagaag
attgaggatttcttgctgaaggaagaatacaaaattatggattacagtttgaccacagtt
ggactggagctggtgaatgtttcagcatcctgggatgaggggattgttgagctttttgaa
aagatcaagcgggagaacaaagcaaacggacatctgaccggtgatgacgggctcttcttc
actaatctgtacgtcactcccgtcctgaaaaatatcagcctacacttagaggaagggatg
atgctcgcagtggccggatctactggatcaggaaagagttccctgcttatgatgatccta
ggagagctgataccatccgagggtaaaatcagacacagcggtcggatttcatattcgcca
caaacgtcttggataatgccaggaaccattcgtgacaacatcctttttggcctgacttat
gacgagtttcgctacacttctatcatcagggcctgccagctggaagaggattttgagtct
ctgcctgagaaagacaagacgcccatagcagaaggaggagttaccctcagtggcggtcag
agagccagaatctgcctcgccagggccgtgtataaagatgcagacctatacctgctggac
gcacctttcacccacctggacatcccaacggagaaagaggtctttgacaaatgtgtctgc
aaactaatggcctccaagactcgtgttgtggtcaccagcaaattggagcatctgaaacgt
gccgacagaatccttctgttgcacaatggagactgctacttctacggcaccttttccgag
ctgcaagcacagcggccagacttcagctccctcctgctcggacttgaagcctacgacaac
atcaacgcggagcggcgcagttctatcctcacagagactcttcgccgcgtctcagtagat
gaaactgctggtttccgtggcacggaccccaaccgccagtccttccgccatgcgccgcct
catagccatactgtgggtgatggctatcctgaaaaacgcaagccgtcgctcatcctcaac
cctcttgcagctgcccgcaaattctccttcatcgggaactcccagcagacaaataactac
cagtccgcgactatggaagatggagtccatgacctttcagagagaaggttttctgtagta
cctgaggatgatcaggtagaagaggcgcttccacggggtaacatgtatcaccatggctta
cagcacctcaatgacagacgccagtctgttctggcatttatcaccaatgcccaaggtcat
gagcgcagggagcagatgcagtcatcctttaggaagaagctgtccatcaccccacagtgt
aacctggcatcagaactcgacatctacgcccgccgcttgtccaaggacagtgttttcgat
atcagcgaggaagtggatgaagaagacatggaggagtgctttgcagatgaacgtgaggac
atttttgaaactacctcatggagtacctacctacgctatgtttccaccaacaggagttta
atctatgtcttaatttttattgtgattgttttcgccattgaggttgctggttgtgtcatt
gggatttttctcataacagacgagatctggagggacggtgcaaacccaaattcacccaac
tacatcgatgagcaacacccaaacgcctcatcaacccctgtccacctggcagtcatagtt
acaccaaccagcacgtactacatcatctacatcttctttgctcactcagatagtatactg
gccctcggagtctttaggggtcttcctttagtccacacattactgactgtgtccaaacgg
ctgcatgaacagatgcttagctctgtgctacgggcccctatgtctgtgctcaacaccatg
aaaacaggccggattatgaacagattcaccaaagatatggctgtgattgacgacatgcta
cctcttgtgctttttgacctcatacagttaactttacttgtcatcggctgcatcttcacg
gtgtccatcatgagaccatacatcttcatatctgccatcccgctggctgttatctttgtg
gtcttgaggaagtactttttaagaaccggacagcaactgaagcagctggaggccgaagct
cgtagtcccctcttctctcacctcatcatctcactaaagggtttatggacgatcagagca
ttcggacgtcaaacttacttcgagacacttttccacaaagctctcaacacccatacagcc
acctggttccactacctgtccaccttgagatggttcctgttccgctgcgatgtgattttc
gttctgtttttcaccgctgctgccttcattgctgtgggaaccaaccaggacagaccaggc
gagatcggcatcatcgtggccctagctatgctcatcctgggcactttccaatgggccatc
atcacgagcatcaatgtggacggtctgatgcgttcagtggatcgagttttcaaattcatc
gacttggtgtcagaagagtcgttccaggggaaacctagaggtaaaggaggttctagcctt
gtcatcaacaacccgaacgcctacaaccactggcccaaccggggccagctggacgtccag
cacctcactgttaaatacacagaagctgggcgagccgtgctcaacgacatctccttctcc
gtggagggcggccagagtgtgggtcttctgggtcgaacaggttctgggaaaagcacgctg
ctgtcggctctgctgggcctcacctacactgacggtgaaatgttaatcgatggggtttct
tcaagctccatgccagtgcaaacatggaggaaagccttcggagtggtgccgcagaaagtg
tttattctaactggaactttccggatgaatctggatccatacgggcgttacagcgatgat
gagctctggagggtggctgaagaagtcggtttaaagtccgtcatcgagcagttcccagat
aagctggactttgagctgaaggacggaggcagtgtgctgagtaacggccacaaacagctg
atgtgcctcgcccgctccatcctcagcaaggcccgcattctgctgctggacgagccttcc
tcctacctggaccccataacactgcaggtcctgaggaagacgctgaagcagtcgttttcc
ggttgcaccgtcatcctatcagaacacaaagtggagccgctgttggagtgtcagtccttc
ctgatgattgagaagaacggcgtcaaaagctacgagtccattcagaaactcatgaacgaa
atgagccatctgaaacaggccatcagcccggccgacaggctccgcctcttccccacgccc
caccgcctgaattccatcaagagaccgcagccgcagaccaccaagatctcctccctgcct
gaagaagctgaggatgaaatccacgacactcgactttaa
DBGET
integrated database retrieval system