Cyprinodon variegatus (sheepshead minnow): 107083553
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Entry
107083553 CDS
T06110
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107083553
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107083553
Transporters [BR:
cvg02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
107083553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
107083553
NCBI-ProteinID:
XP_015228357
Ensembl:
ENSCVAG00000016151
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MRSRGYVTMLDPFQQLYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIVDININMSV
VISALIAIFYTLVGGLYSVAYTDVVQLFCIFLGLWISVPFALSNPAVSDIGLSAKEEIYQ
SPWLGNIKPEDNWLWADNFFLLMLGGIPWQVYFQRVLSASSATYAQVLSFIAAFGCLVMA
VPSVLIGAIGASTDWNQTTYGSLAPKDKDESDMILPIVLQHLCPPYISFFGLGAVSAAVM
SSADSSILSASSMFARNIYQLAFRQSASDTEIVWVMRITIFVFGALATAMALLTGSVYGL
WYLSSDLVYVIIFPQLLSVLFVKGTNTYGSVAAYIFGLLLRIGGGEPYLKLPPFIYYPGW
VTVERVHHLTGDVEFFVQQRFPFKSVSMVASFLANVAFSYLTKYLFESGMLSHKYDFLDA
VVSKHSKEIMDKTTLVSNHDNIILSEMAPVRQALGATIAGTFTNTEVLSDDGESSPESFH
SDN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcacgtggatatgtcacaatgctggaccctttccagcagctttatggtaaaagg
atggggggattgcttttcattcctgcactcatgggagaaatcttctggtctgcagccatc
ctgtctgccttgggtgccactctcagtgtgatcgtggacataaacatcaacatgtctgtg
gtgatttcagcgctcatagctatcttttacacactggttggaggactgtactctgtcgca
tacacagatgtcgtccagctcttctgcatatttttgggtttgtggatcagtgtgcctttt
gccctttccaatcctgctgtgtcagacatcggtctttccgccaaggaagaaatctatcag
tccccttggctgggtaacattaaacctgaagacaattggctgtgggcagacaacttcttt
ttgctgatgttgggagggattccctggcaggtctactttcaacgagttctctctgcctct
tcagctacctatgctcaagttctctctttcatagctgcctttggctgcttggtcatggct
gttccttctgtcctcatcggagctattggggcttccacggactggaaccaaactacctat
ggctcccttgcaccgaaggacaaggatgaatctgacatgatccttcccatagtgcttcag
cacctctgcccaccctatatctccttctttggactgggagcggtgtccgcagcagtgatg
tcatcagcagactcgtccatactttcagccagctccatgtttgccaggaacatctatcag
ctcgcctttcggcagtcggcttctgatactgagatcgtttgggtgatgcggatcaccatc
tttgtgtttggagctcttgctacagcaatggcactattaaccggatctgtatacggcctt
tggtacttaagctctgacctcgtctacgttataatcttcccccagcttctcagtgttttg
ttcgtcaaaggcaccaacacatatggctctgtagcggcctatatctttggactcttgttg
cgtattggtggaggggagccttacctaaaactgcctcccttcatctactaccctggctgg
gtgacagtggaaagggttcaccacctcaccggagatgtagagttcttcgttcagcagagg
ttccccttcaagtctgtctccatggtggcatctttcttagcaaatgtggctttctcctac
ctgaccaagtacttattcgaaagcggcatgctgtctcacaagtacgacttcctggatgct
gtcgtttccaagcatagcaaggagattatggacaagaccacgctggtaagcaatcatgat
aacattattttatcggagatggcacccgtcagacaagctctgggtgctacgattgctggg
actttcaccaacaccgaggttctaagcgacgatggtgagtcaagtccggagtcttttcac
agtgacaactag
DBGET
integrated database retrieval system
