Cyprinodon variegatus (sheepshead minnow): 107084276
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Entry
107084276 CDS
T06110
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A-like isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107084276
04020 Calcium signaling pathway
107084276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107084276
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107084276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107084276
NCBI-ProteinID:
XP_015229524
Ensembl:
ENSCVAG00000012086
LinkDB
All DBs
Position
Unknown
AA seq
2219 aa
AA seq
DB search
MKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHTTCYDQVTREIVEERPCGNHTPSRLC
PNGSKCDSGWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDVEGSMWNWMYYI
PLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEE
VILAEEDATGNFDGSRRRPTIKTRNNKTELLNQEEGEDNIGDAVGFARSSIKSGKDGSNY
SKKERRLRFFIRKIVKTQAFYWTVLCLVGLNTICVAVVHYDQPELLSDFLFYAEFIFLGL
FMSEMLIKMYGLGIQPYFHSSFNCFDCVVIVGSIFEVVWSTIKPGTSFGISVLRALRLLR
IFKVTKYWAPLRNLVVSLLNSMKSIVSLLFLLFLFIVVFALLGMQLFGGQFNFESGTPPT
NFDTFAAAIMTVFQILTGEDWNMVMYDGIESQGGVNDKGMVFSIFFIVLTLFGNYTLLNV
FLAIAVDNLANAQELTKDEEEQEEAANQKTALQKAKEVAEVSPLSAANLSIAAKEQQKNH
IKGNKSVWEQRTSEIRRQNLMSSREVLYNELEQDDWKVGGEGEEVSFPRKARGDVKTHLD
RPLVVNPQDNRNNNTNKTQPGELPLDQQYRRQDIDHRRRAAHHCHYHHHRHQKPTNPSTV
DTSQLMETNLGHGFSCTSLGNIEENPERQQDEEKNNHRSHRGHRHRNRECRESHSISPHH
SEGAEGSGEARRCRQHRRAAREGEECRKHLCRAAEGDGEKSGEEGGQKTRRHRHCNQERC
RGHRVRKEHHSTCPSLSTTRPIQQYNEDLDNFRNNSKLASANEHPYDLPPDHPDHPDHLN
NLLNCHDADTHTLLHSMDSLILTSMAKPDYTAIDMPPVYPYPSTNAILQVNKNANTDQKK
SEEKKEEEDEGEDEDGPKRMPPYSSCFIMSTTNPFRKCCHYILTLKYFEFSILSVIAMSS
IALAAEDPVKPDSPRNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGSYFRDLWNILDF
IVVSGALVAFAFTSSTRGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSL
KNVLNILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKEFARDCRGEYLVYEKEEVKAEKR
EWKKYDFHYDNVAWALLTLFTVSTGEGWPQVLKHSVDSTYEDQGPSPGYRMETSIFYVVY
FVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINARPLTRHMPKNKLS
FQYRMWHFVVSPPFEYSIMALIALNTIVLMMKFQGASQSYDNVLKYLNIVFTTFFFMESI
LKIIAFGPLNYFRDAWNVFDFVSVIGSITDILVTEFWNLNNFINLSFLRLFRAARLIKLL
RQGETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNIAIDEEEESAIDEHNN
FRTFIMALMLLFRSATGEAWHEIMLACLGEKKCDPDSGNTGKECGSVFAYTYFVSFIFLC
SFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRISYTDMYQMLRH
MCPPLGLGKRCPARVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKHQ
MDAELRKEMMAIWPNLSQKTLDLLVTPHKAATDLTVGKIYAAMMIMEYYRQSKTKKMQAL
REEQCSSLPNRTPLMFQRMEAPSEGGGLDNQGGQGQNGLPSTQPDNINSIPPEGGLSESQ
SWMTAKAQEMFQKTGNWSPDRPYPDDVHENRHNPQTVEMREMGRDGYSDTEPYHPMDGHG
RTLSMPRLSADNQRRRHRPRGNNLSTITDNSPMRRSTSSLVHGRSGRGVRLDDYSLERVV
SEEARHGGGRRHRDRSHRTSQRSLTRYTDADTGMISISCLGLGTDLSTTTQSGDLPPKER
ERDRGRTKDRRHHHHHHRHHSSMDKERYDRHEYQHRHPHDRHWSRSPSEGPDGRGHRQGS
SSVSGSPVPSTSGTSTPRRGRRQLPQTPAVPRPHVTYSPAVRKPLYGPPGPGRLRSPSPR
HFSPPDHDRGYHQRPPSRHASPHHGGSSSRHGSPRSPRHQSPHSPLHGSPRSPHRNRWSG
PPPGDSLEGDGPFYERDYEYERHHEPPAYEQSLSHGNPHSHGGNPHPHPRSPRTARHGPP
PPPHPHPRRVPNGYRSSSPSPQRRGPPGAAPPHHRPPHPRGPRKGLHEPYSETDEDDWC
NT seq
6660 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccatgatccccctgcttcagattggcctgctgttgttcgtggctatccttatg
ttcgccatcattggcttggagttctacatggggaaattccatacaacatgctatgatcaa
gttacacgagagatagtggaggaacgtccgtgtggtaaccatactccttccaggctgtgc
cccaatggttcaaaatgtgattctggctggattggaccaaactatggcatcacccagttt
gacaacatcctgttcgctgttctcacagtcttccagtgcatcacaatggaaggatggaca
gacatgctctactacagcaatgacgtagagggcagcatgtggaactggatgtattacatc
ccccttatcatcattggctccttctttatgctcaacctggtgctgggtgtactttcaggt
gaatttgccaaagagagggaacgggtcgaaaacaggagtgagttcctgaagctgaggcga
cagcagcagatcgagagagagcttaatggatatttggagtggatctgcaaagcagaggag
gtaattctggctgaagaagatgccaccggaaactttgatggttcgagacgaaggccaact
atcaaaaccagaaataacaaaacagagctgctaaatcaagaggaaggagaagacaacata
ggagatgcagtaggctttgctcgctctagcattaagagcggtaaggacggctctaactac
agcaaaaaagagcgccgattgcgattcttcatcaggaagatagtgaagacacaggctttc
tattggacagtgctctgccttgtgggcctcaacaccatctgtgtggccgtggtgcattac
gaccagccggagcttctttccgactttctcttctatgcagagttcatattcctcggtttg
ttcatgtctgagatgctgatcaagatgtatggtctgggcatccagccctacttccactcc
tcatttaactgcttcgactgtgtggtaattgttggcagcatctttgaggttgtgtggtcc
accataaaaccaggcacgtcattcggcatcagtgtgttacgagctctcaggctgctgcgc
atctttaaagttaccaagtactgggcgccacttagaaacctggtggtttctctcttgaac
tccatgaagtccattgtcagcttgctcttcctcctcttcctctttattgtggtctttgct
ttgttggggatgcagctttttggaggacaattcaactttgaaagtggaaccccgccgacc
aattttgatacttttgcagcagcaatcatgactgtgtttcagatcctgacaggagaggat
tggaatatggtgatgtacgatggcattgagtcacagggaggagtaaacgacaaaggaatg
gtgttctccatctttttcattgtcctcacactatttggcaactacacactgctgaatgtc
ttcttggctatcgctgttgacaatctggctaacgcccaagagcttaccaaggacgaagaa
gaacaagaagaggcagcaaatcaaaagacagcactacagaaggctaaggaagtggcagag
gttagcccgctatctgctgcaaacctgtcaattgctgcaaaggagcagcagaagaaccac
atcaagggcaataagtctgtgtgggagcagagaaccagtgagattcggcgccagaacctg
atgtcaagccgtgaggtgctctacaatgagctggaacaggatgactggaaggtgggaggc
gagggagaagaggtgtcgttcccacggaaagcacgtggcgacgtgaaaacacacttggac
agacctctggtagtaaacccacaggacaatcgaaacaacaacaccaacaagacccaacct
ggagagctgcctctggatcagcagtatcgacgccaggatattgatcaccgccggcgtgct
gctcaccactgtcactaccaccaccatcgccatcagaaacccactaacccgagcactgta
gatacaagccagcttatggaaaccaacttggggcatggttttagctgcacatctttgggt
aacatagaagaaaatccggaacggcaacaggatgaggagaagaacaaccaccggagtcat
cggggccatcggcacaggaacagagagtgcagggagtctcacagcatttctccgcatcat
agtgaaggtgccgagggtagtggtgaggcaaggaggtgtagacagcaccgcagagcagcc
agggagggagaagagtgcagaaaacatctatgtagggcagcagagggagatggtgagaaa
agcggagaggagggtggacagaagacaagacgacatcgacactgcaaccaggagagatgc
agaggacaccgtgtcagaaaggagcaccacagcacctgtccaagcctctcaactacacga
ccaatacaacagtataacgaagaccttgataactttcgcaacaacagcaagcttgccagt
gccaatgagcacccctatgaccttcctcctgatcaccccgatcatccggaccacctcaac
aacctgctgaactgtcatgatgctgacactcacaccctgcttcacagcatggacagcctg
atcctaaccagcatggcaaagcctgactacacagcgatagacatgcctcctgtttacccc
tatccttctaccaatgcaatcttgcaagtgaacaagaacgccaatacagaccaaaagaaa
agcgaggagaagaaggaagaggaggatgagggtgaagatgaagatggccctaaacgcatg
cctccctatagctcttgtttcataatgtctaccaccaacccgtttcgcaagtgctgtcac
tacattcttactctgaagtattttgagttcagcatcctgtcagtcattgctatgagcagc
atcgcccttgcagcagaagaccccgtcaagcctgactcaccacggaacaatgtgctgcgt
tattttgactacgttttcacaggggtcttcacatttgaaatgttgatcaagatggtggta
ctcggcttgtttctccaccaagggtcttactttcgtgacttgtggaacattctggacttt
atagtggttagtggtgctctggtggccttcgccttcacgagcagcacccgggggagcagc
aaaggcaaagacatcagtacaatcaaatccctgcgtgtgctgagggtgctgcgtccactt
aaaaccatcaagcgtctcccaaagttaaaggcagtttttgactgtgtggtgaactccttg
aagaatgtgttgaatatcttgattgtctacatgctcttcatgttcatcttcgctgttgtg
gctgtgcagctgtttaagggccgcttcttctactgcacagatgaatccaaagagtttgca
cgggactgcaggggcgaatatttagtctatgaaaaagaagaggtaaaagctgagaagcgg
gaatggaagaagtacgattttcactacgacaacgtggcttgggccttgctcaccctcttc
accgtctccaccggagaggggtggccacaggtgctaaagcactcagtggactccacttat
gaggatcagggcccaagcccgggatacaggatggaaacgtccatcttttacgtggtgtac
ttcgttgtcttccctttcttctttgtaaacatctttgtggctctcatcatcatcaccttc
caggaacaaggggataagatgatggaggactacagcttagaaaaaaacgaaagagcctgt
atagattttgctattaatgccagacctctgactcgccacatgccaaagaacaaactgagc
ttccagtatcgcatgtggcattttgtcgtgtcccctcccttcgagtacagcatcatggct
ctgattgcactcaacacaatagtcctaatgatgaagtttcaaggtgcatcacaaagttac
gataatgtgctaaagtatctaaacattgtgttcaccaccttcttctttatggaatctata
ctgaaaatcattgcttttggtcctttgaattacttcagagatgcctggaacgtttttgat
tttgtctcagtcattggaagcattactgatatattggtaacagagttttggaatctgaat
aatttcatcaacttgagcttcctgaggctttttagagcagctcgcctcattaagctcctg
agacagggggaaacaatacggatcttattatggacatttgtccagtcctttaaggctctg
ccatatgtgtgtctactcattgccatgctgttcttcatctacgcaatcatcggcatgcag
ttgtttggaaacatagctattgatgaggaggaagaaagtgccattgatgagcacaacaac
ttcagaaccttcattatggccctaatgctgctattcaggagtgctacaggtgaggcgtgg
catgagatcatgctggcgtgcctgggagagaaaaaatgtgacccagactcaggaaacaca
gggaaggagtgtggcagcgtattcgcctacacctattttgtctcctttattttcctctgc
tccttcctgatgctcaatctctttgtggccgtcatcatggacaattttgagtacctgacc
agagactcgtctatcctgggcccgcaccatttagacgaatatgtaagaatatgggctgag
tacgacccagctgcctgcggtcggatcagttacacagacatgtatcagatgctaagacac
atgtgtccgccgctaggcctcgggaagaggtgtcccgcccgggtcgcctataagaggcta
cttcgcatggatctaccggtcgctgatgacaacacagtgcattttaactccaccctcatg
gctctgatcaggacagcactggatataaagattgccaagggtggtgcagataagcaccag
atggatgcagagctgagaaaagagatgatggctatctggccaaatttatcacagaagact
ctggacctgctggttactccgcacaaggcagccacagacttgacagtgggcaaaatctac
gctgccatgatgatcatggaatactacagacagagcaagaccaaaaagatgcaggccctg
cgagaggaacagtgctcctcccttcctaaccgaacgccattaatgtttcagcgcatggag
gcaccctctgagggagggggtttggacaaccagggggggcaaggccagaacggtctcccc
agcactcaaccagacaacatcaacagcatacctcccgaaggtggtttgagtgaaagccaa
tcatggatgacggctaaagcacaggaaatgttccaaaagactggtaactggagccctgac
cgcccctatcctgatgacgtccacgaaaaccgccataatccccagactgtagagatgagg
gagatggggcgggacgggtactccgacactgagccctatcacccaatggatgggcatggg
cggaccctttccatgccccgcctctcggcagacaaccaacggaggagacacagaccccgc
ggaaataacctcagtaccattactgacaacagtccaatgcgtcgctctacctccagtctg
gtccacgggcgttcaggtcgtggagtgaggctggatgactactctttggagagggtggtg
tctgaggaggcgagacacggcggtgggcgcaggcacagggacagaagtcatcgcacttca
cagcgatcactaaccagatatacagacgctgacacaggtatgatatctatttcatgtcta
ggtctgggcacagacctcagcaccactacacagtcaggtgatctgcctcccaaagagcgg
gagagagaccgtggacgcaccaaggaccggcgtcatcaccaccaccatcaccgtcatcac
agctcaatggacaaggagcgctatgaccgccatgaataccaacataggcacccccatgac
cgccactggtcccggtctcctagtgaggggcctgacggaagaggtcacagacagggcagt
agctcggtaagcggcagcccggtcccatccacctcggggaccagcactccaaggagaggc
cgccgccagctaccacagactcctgctgtcccacgtccacatgtcacctactcccccgct
gtccgaaagcctctatacggccccccaggcccaggccgactgcgctcaccctcccctcga
cacttctccccaccagatcatgacagaggctaccaccaacgacccccgtcacgtcacgcc
tctccgcaccatggcggatcctcgtccaggcacggttcaccacgctcacctcgacatcag
tcaccgcactcgccactccacgggtcacctcggtctccacaccgaaaccgctggagcggt
cctcctccaggggacagcctagagggcgacggacccttctatgagagagattatgagtac
gagcggcaccatgagcctccggcctatgagcaaagcctctctcatggcaaccctcattca
catggaggaaatccacacccacatccgcgctcaccaaggactgctcgtcatgggccccct
ccaccccctcacccacatccgcgtagggttcctaatggctaccgctcatcctcgccttcc
ccacaaaggaggggaccacctggggcagctccaccccaccaccgaccacctcatcccaga
gggccccgcaagggtctccacgaaccttacagtgagactgatgaggatgactggtgctag
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integrated database retrieval system
