Cyprinodon variegatus (sheepshead minnow): 107084291
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Entry
107084291 CDS
T06110
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
107084291
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107084291
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107084291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
107084291
NCBI-ProteinID:
XP_015229561
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MPKKQQQQKQTQNNMQPDLELNHLMHHSPLPPPYHPPLRSRSPSPSSPSGSTLELPNVPS
YPRLPPIASPPSKQLYPLPRQLSGLSNPAFFIEDDSESSGLRPAVNVEDVDHQKTGGGEE
KSNTSQILTPQDPKVTTLTVPLAPAGGRQSKGDKDSGRNRRSIWTKIKRARSQSEDDDEE
VSIPVRAWPSQSSLQSSDDMLRERPASAASQTSAVVNERLQELVRMFKERTEKAKEKLID
PDSSDEESIITSPPQPAPEAALMDEEEEGIRGDSSVGEEERGGMGSREDEETSGGPSKVK
TTPRWIQACLHLRFPASIDPFTNLMYVLWMFLVSLAWNWNVWLIPVRWAFPYQTPGNIYY
WLVTDYLCDLIYILDITVFQPRLQFVRGGDIVCDKKEMRKNYMKTKRFKFDVASLVPLEL
FYFKTGINPLLRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTTTYLLYCLHCNACLYH
WASSYIGLGSTQWVYNGVGNSYIRCYYFAVKTLITIGGLPDPSSLFEIVFQLINYFVGVF
VFSIMIGQMRDVVGAATAAQTYYRTCMDNTIKYMTSYRIPKEVQNRVKTWYNYTWQSQGM
LDEQELLTQLPDKMRLDIAVDVNYSIVSKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVC
KKGEVGREMYIIKAGEVQVVGGPDERTVFATLRAGSVFGEISLLAVGGVNRRTANVISHG
FANLFILDKKDLNEILVHYPESKKLLRKKARKMLNKGKKPEPKEEPKEVVQVPAAPVRPE
TPKLLRAALEMTERSSGLKGALAKVKEKTSKSSISLQQSLSASLRPPSAALGSGPEREVD
TPTSISASSMTLHSTPYSCNPEDLPPAEFHSDAVKKDGSEDEWDEMEDRKEKRI
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaaacaacaacagcagaaacaaacgcaaaacaacatgcagccggacttagaa
ctcaaccacctcatgcaccactcgcctctccctcccccttatcatcctcccctaaggtct
cgctccccttctccttcctcacctagcggtagcaccctcgagctacccaatgtgccctcc
tatccacgcctgcctcccattgccagcccgccatcgaagcagctctacccgctgccccgg
cagctgtctgggctctctaatccggccttcttcattgaagatgactcagagagctctggc
ctccgtccggctgtaaacgtagaagacgtcgaccaccagaaaacaggaggaggagaagag
aagagcaacacgtcccaaatcctcacccctcaggaccccaaagtgacgactctgactgtc
cctttggccccggcaggagggcgtcagagtaaaggagataaagacagtgggaggaaccga
aggagcatctggacaaagatcaaacgagcacgttctcagagtgaagatgatgatgaagaa
gtaagcatcccagtcagagcctggcccagtcagtccagtctgcagagctcagacgacatg
ttaagagagcgtccagcctctgctgccagtcagaccagtgcagtggtcaatgaacgactt
caggagctggtcaggatgtttaaagagagaacagagaaggccaaggagaaacttattgac
ccagacagctccgatgaagaaagcatcattacctctccccctcagcccgcccctgaagct
gcactcatggatgaagaagaggaaggtatcagaggagattcatcagttggtgaggaagaa
agaggagggatggggagcagggaagatgaggagacgtctggaggccccagcaaggtgaaa
accactccccgatggatccaggcctgtttgcacctccgattccctgccagcatcgacccc
tttaccaacctaatgtatgtgctctggatgttcctggtttctctggcctggaactggaac
gtttggctcatcccagtccgctgggccttcccctatcagactcctggtaatatctactac
tggctggtgaccgactacctgtgtgaccttatttacatcttggacatcacagttttccag
ccacgcctgcagtttgttcgtggaggagacatagtgtgtgacaagaaagaaatgagaaag
aattacatgaaaaccaagcgcttcaagtttgatgtagccagccttgttccactggagctt
ttttattttaaaactggcatcaaccctctgctgcgtctaccacgcctgctgaaaataaac
tccttctttgagttcaatgagcgtctggaggccatcttgaccaaagcctacatttacagg
gtgatccgaacaactacatatctcctctactgtcttcactgcaacgcctgtctctaccac
tgggcgtcctcctacatcggattgggctccacccagtgggtgtacaatggtgtcggcaac
agttatattcgatgttactactttgctgtgaaaactctgatcaccatcggaggcctgcca
gatccctcctcgctgtttgagatcgtcttccagctcattaactattttgttggagtcttt
gtcttctccatcatgattggtcagatgcgggacgttgttggcgcggccacagcggctcag
acctactaccgcacctgtatggacaataccattaaatacatgacgtcttatcgcatacca
aaagaagtccagaaccgtgtcaaaacctggtataattacacttggcagtcacaagggatg
ctggatgaacaggagcttctgacccagctgccggataaaatgcgcctggatatcgccgta
gatgtcaactactccattgtgagcaaagtccctctcttccagggttgtgatagacaaatg
atttttgacatgctgaaaagcctgcgatctgttgtctacctgcctggagattatgtctgc
aagaagggcgaggtgggtcgagagatgtacatcataaaagcaggggaggtgcaggttgtt
ggaggacctgatgagaggacagtgtttgccaccctcagagcaggatccgtctttggagag
ataagtttacttgcagtgggtggagtcaacaggcgcacagccaacgtgatttctcatgga
ttcgcaaaccttttcatcctcgacaagaaagacctgaatgagatcctggtccactaccct
gagtcgaagaaactgctgcgcaagaaagccaggaagatgctcaataaagggaaaaagcct
gaacccaaagaagagcctaaggaagtggttcaggtaccagcagctccagtcaggccggag
actcccaaactgctccgagcagctcttgagatgacggagagatcatcaggactaaaaggg
gctctggctaaagtcaaagagaagaccagcaaatccagtatatctctacagcaatctttg
tccgcctctttacgtcctccatctgctgctcttggctctggacctgaacgggaggtggac
acaccgacatccatctctgctagctctatgacacttcactcaactccttatagttgcaac
ccagaagatcttcctcctgcagagttccacagtgacgcagtcaaaaaggatggtagtgag
gatgagtgggatgaaatggaggacaggaaggagaagaggatataa
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