Cyprinodon variegatus (sheepshead minnow): 107087192
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Entry
107087192 CDS
T06110
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107087192
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107087192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
ATP-synt_B
GPHH
Spem1
IQ
New_glue
Motif
Other DBs
NCBI-GeneID:
107087192
NCBI-ProteinID:
XP_015234109
Ensembl:
ENSCVAG00000011045
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MAQLLVPPGPDSFRPFVPESLAAIERRIAEEEARRPRAERRSDDDDENGPKPNSDLEAGK
SLPFIYGDIPPGMVSTPLEDLDPYYSNQKTFIVLNRGKAIFRFNATSALYILNPFNPLRR
IAIKVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRVPDMSNSSGSLNVTGNGTGP
SNATLKWIEYISDESNYYYLPGRRDALLCGNGSGAGLCPEGFLCLKTGRNPDYGYTSFDT
FSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMAYD
EQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSGRGGPTSESSSGTSK
LSSKSAKERRNRRKKRKQREEEEERGVCDKFHKSMSEDSIKRSSFRFSIDANRLSYEKRC
SSPNQSLLSVRGSLFSPRRNSRASLFSFRGRARDMGSENDFADDEHSTFEESDSRRGSLF
LPRRLERRCSAVSQMSLGAPRIVLPANGKMHCSVDCNGVVSLVGGTSVTTSPVGLLLPEG
TTTDTEIKKRRSGFLQPSMDYLDEPGARQRALSVASILTNTMEELEESRQKCPPCWYRFA
NKCLIWDCCPAWLKIKEVVSMVVMDPFVDLAITICIVLNTLFMAMEHYPMTKEFDNLLTI
GNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCK
ISEDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAEQTMCIIVFMMVMVIGNLV
VLNLFLALLLSSFSADNLAATDEDSEMNNLQIAVGRIQRGISYVKAKVRQFLQSLCFGGG
KGSGLAEESKPLDDLQSNGKGNCISNHTPLEITKDSSGVYLMEGNGKPGGLTVGVGGDTT
NKYTMEECDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLDVDPQP
LSSSEGSTVDIRPPGDGAESVELEPEESLDPEACFTEGCVSRFPCCQVSEDVGWFKSWWT
LRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTIKTVLEYADKVFTYIFILE
MLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKTLRTLRALRPLRA
LSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNTTNDELFP
ISVVNNKTECLNLVNNSARWRNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDLE
EQPEYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPTNEFQGFVFDCVTKQAFDIVIMILICLNMVTMMVETDDQTKE
MDKILYRINLVFIVLFTGECALKMISLRHFYFTIGWNIFDFVVVILSIVGMFLSEVIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFA
MSNFAYVKRESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDCDSKMEHP
GTYYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMF
YEVWERFDPDATQFVEYSKLSDFADALDPPLRIAKPNMIQLIAMDLPMVSGERIHCLDIL
FAFTKRVLGEGGEMDMLRGQMEERFMASNPSKVSYEPITTTLRRKQEEMSAIVIQRAFRR
YMMHQAMKKASALYKEKLKEGVHDPDKDVMVISKFNENSTSDKTDMTPSTASPPSYNSVT
KSDKDKYEKENREKENKGKDLKDRKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggaccagacagcttccgccccttcgtccccgagtcg
ctggccgccatcgagaggcgcatcgccgaggaggaggcccggcgaccgcgggcggagcgt
cgcagcgacgacgacgatgaaaatgggcccaagcccaacagcgacctggaggcagggaaa
tctctgcccttcatctacggggacattcctccaggaatggtgtcgacccctctggaggac
ctggacccctattacagcaaccagaagaccttcatagtattgaatcgtgggaaggcaatc
ttccgtttcaatgccacttctgccttgtacatcctaaaccccttcaaccctctgaggagg
atagctatcaaagttttagtgcactcgatgtttagcatgttgatcatgttcaccattctg
accaactgtgctttcatgaccctgagcaacccgccggaatgggcaaagaatgtagagtac
acattcacagggatttacaccttcgagtctctaataaagatcctggccagggggttttgt
gtggggaagttcacttttctgcgggacccgtggaactggctggatttcagtgtcatactt
atggcgtatataacagagtttgtaaacctaggcaatgtttcagctctgcgcacattcaga
gttttgcgagctttgaaaactatctcagttataccaggcctgaagaccatagtcggcgct
ctgatccagtctgtgaagaagctgtcggatgtgatgatcctcaccgtgttctgcctcagc
gtcttcgctctgatcggcctgcaactcttcatgggcaacctgaggcagaagtgcgtgcgt
gtgccagacatgagcaacagcagcggcagcctcaacgtgacggggaatggcaccggtccg
tccaacgccacgctgaagtggatagagtacatcagtgatgagagtaattattattacctt
cctggtcgtagggacgctctgctctgtggaaatggcagcggtgcaggactctgtccagag
ggatttctttgtctcaaaacgggccgtaatccagactacggctacacgagcttcgacacc
ttcagctgggccttcctctctctgtttcgactcatgacgcaggactactgggaaaacctc
taccaacagactttgcgtgcagcagggaagccctatatgatcttcttcgtgctggtgatc
ttcctcggctccttttacctcattaacctgatcctggctgtggtagccatggcttacgat
gagcagaaccaggccaccatcgaggaggctcagcagaaggaggaggagttccaggccatg
ctggagcagctgaagaggcagcaggaggaggcgcaggttgccgcggcagcagccacggag
agcggagagtacagcgggagagggggccccacctctgagtcctcctcggggacgtccaag
ctgagctccaaaagcgccaaggagcgacgcaacaggaggaagaagaggaagcagcgcgag
gaggaggaggagaggggcgtgtgcgacaagttccacaagtccatgtcagaggacagcatc
aagaggtccagcttccgcttctccatcgatgctaaccggctgtcctatgagaaaagatgc
tcctcacccaaccagtctctcctcagtgtccgtggttccctcttctcgccccggaggaac
agccgcgccagcctcttcagcttccgcggccgagcccgcgacatgggctcggagaacgac
ttcgccgacgacgagcacagcaccttcgaagagagcgacagtcgccgggggtccctgttc
ctgccgcgccgcctcgagcgccgctgcagcgctgttagccagatgagcctcggcgcgccg
cggatcgtgctccccgccaacgggaagatgcactgctcggtcgactgcaacggggtggtt
tcgctggtcggtgggacatctgtaacaacctctcctgtaggtctcctgctacctgaggga
acaacaacagataccgagataaagaagcgccgatctggattcctgcagccttccatggac
tatttagatgaaccaggggcgcggcagagagccttgagtgtagccagcatactcaccaac
acaatggaagagctggaagagtccagacagaagtgccccccctgctggtatcgatttgcc
aacaagtgtctgatttgggactgctgtcccgcatggctgaaaatcaaagaggtggtcagc
atggtggtcatggacccctttgtggatctggccatcaccatctgcatcgtcctcaacact
cttttcatggccatggagcactacccaatgactaaagaatttgataacctcctcaccatt
ggaaacctggtgtttacaggcatcttcacagctgaaatgtgctttaagatcatcgccctg
gatccttactattattttcaggaaggctggaacatctttgacggtatcattgttagcctc
agtctcatggagctgggcttggctaacgtcgaaggcctgtctgtgctcaggtccttcaga
ttgcttcgggtcttcaaactcgccaagtcctggcccactctgaacatgctgatcaagatc
atcggtaactcggtgggcgctctgggcaacctgactcttgtgctggccattatcgtcttc
atcttcgccgtggtgggcatgcagctgttcggcaagagctacaaggagtgcgtgtgcaag
atttcggaagactgcgagctgccgcgctggcacatgcacgacttcttccactccttcctc
atcgtgttccgcgtgctgtgcggggagtggatagagaccatgtgggactgcatggaggtg
gcagaacagaccatgtgcattattgtcttcatgatggtcatggtgatcggaaacctagtg
gttctcaacctttttctggctctcctcctgagctcattcagtgcagacaacctggccgcc
accgacgaagacagcgagatgaacaacctgcagatcgccgtcggacgcatccagcgcggc
atctcttacgtcaaagccaaagtgcgacagttcctccagagcctctgcttcggcggcggg
aagggatccggcctggctgaggagagcaaacccctggatgatctacagagtaatggaaag
gggaactgcatttctaaccacactccactggagatcaccaaagactccagcggggtatac
ttgatggagggcaacggaaagccaggagggctgactgttggggtgggtggggacaccacc
aacaagtacacaatggaggaatgcgactatatgtcctttattcacaaccccagcctgact
gtgaccgtccccatcgccgttggcgagtcagactttgaaaacctaaacacggaggatttc
agcagtgactcctctgacgtggagggaagcaaagagaagctggacgtagacccccagccc
ttaagctcatcggaggggagcacagttgatatccgtcccccaggagatggggctgaatct
gtggagctggaacccgaggagtcattagacccagaagcctgctttacagaaggctgtgtg
agtcggttcccatgctgtcaggtcagcgaggatgtaggatggttcaagagctggtggacg
ctcagaaaaacctgcttcattatcgtggagcacaactggtttgagtccttcatcatattt
atgatcctgctcagcagtggagcgttggcgtttgaagacatttacatcgagcagcggcgg
accatcaaaacagtcctggaatatgcagacaaggtcttcacttatatcttcatcctggaa
atgctgcttaagtgggtggcgtacggctttgttaagtacttcaccaacgcttggtgctgg
ctcgacttcctcatagtcgacgtgtccttggttagcctcgtagcgaatgctctgggctac
tctgagctcagcgccatcaaaactctgaggacactgcgagccctacggcccctgagggcc
ctgtctcggtttgagggcatgagggttgtggtgaatgctctacttggtgccatcccttcc
atcatgaacgtgctcctggtttgcctcatcttctggcttatcttcagcatcatgggggtc
aacctctttgcagggaagtactaccattgcgtcaacaccaccaacgatgagctcttccca
atcagcgtcgtcaacaacaagacggagtgcttgaacttggttaacaatagcgcccgctgg
aggaatgtcaaaatcaactttgacaacgttggcgccggttatctggctctgctgcaagtg
gcaacgtttaagggttggatggacatcatgtatgctgctgtggactctcgtgatttggaa
gagcagcctgaatatgaagtgaacctgtatatgtacctctactttgtcatcttcatcatc
tttggctccttcttcacccttaatctgtttattggtgtcatcatcgacaacttcaaccag
cagaagaaaaagtttggaggtcaagacatcttcatgacagaagaacagaagaaatactac
aatgccatgaagaaactgggttcaaagaaaccacaaaaacccattcctcggccaaccaat
gaatttcaaggctttgtgtttgactgtgtcacaaagcaggcatttgatatagtaatcatg
atcctcatctgcctcaacatggtgactatgatggtggagacggatgaccaaacaaaggaa
atggacaaaatcctttaccggatcaaccttgtctttattgtgctgttcactggggagtgt
gcgctaaagatgatctcccttcgacacttttatttcactatcggttggaacatatttgac
tttgtggtagtgattctttcgattgtaggtatgtttttatctgaagttatcgagaagtac
tttgtgtccccaacattgttccgagtgatccgacttgcccggataggccgcatccttcgc
cttataaagggtgccaagggaatccggactctcctctttgccttgatgatgtcactccct
gccttgttcaacatcggccttcttcttttcctggttatgtttatctatgccatcttcgca
atgtccaactttgcgtatgtcaagcgggagtcggggatcgacgacatgtttaatttcgag
actttcgggaacagtatgatctgtttgtttcagattacaacatcagctgggtgggatggt
ctgttggcacccattctgaataaaagagagccagactgtgacagcaagatggagcaccct
gggacctactacaaaggcaactgtggtaacccttcagtgggcatctttttcttcgtcagc
tacatcatcatttgctttctgattgtggtcaacatgtacattgccgtcatcctggagaac
ttcagtgtggccacagaggaaagtgccgaaccattaagtgaggacgactttgagatgttc
tacgaagtatgggagcgctttgatcctgatgctactcagtttgtggagtacagcaagctc
tctgactttgcagatgctctcgatccgccacttcgcattgctaaacccaatatgatccaa
cttatagctatggacctacctatggtgagtggcgaacgcatccactgcctggacatcctg
tttgctttcactaagcgagtgttgggtgaaggtggagagatggacatgttacgtggacag
atggaggagcgcttcatggcctccaacccttctaaagtttcctatgagccaattactacc
acattgcgccgcaaacaggaggaaatgtcggccatagttatccagagagccttccggcgc
tacatgatgcaccaggccatgaaaaaggcctccgctctctacaaggagaagctaaaggag
ggcgtccatgaccctgacaaagacgtgatggtcatcagcaagttcaatgagaattccacc
tcagataaaacagacatgactccgtccaccgcctccccgccctcttacaacagtgtgaca
aagtcagacaaagacaaatatgaaaaagaaaatagggaaaaggaaaacaaagggaaagac
ttgaaagacagaaaaaaatag
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