Cyprinodon variegatus (sheepshead minnow): 107092027
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Entry
107092027 CDS
T06110
Symbol
vta1
Name
(RefSeq) vacuolar protein sorting-associated protein VTA1 homolog
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107092027 (vta1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107092027 (vta1)
Membrane trafficking [BR:
cvg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
107092027 (vta1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vta1_C
Vta1
DAG_kinase_N
Motif
Other DBs
NCBI-GeneID:
107092027
NCBI-ProteinID:
XP_015241786
LinkDB
All DBs
Position
Unknown
AA seq
192 aa
AA seq
DB search
MVNMIKSFYTSSLLIDVLTVFGELSEELKQFPVFSSCISDEFGAEGFSGQSFSHGGSFRA
DLPSQDQNSNQGPAPGIGFSQDPGSAPGGQPASNYNNIQIPPGAHAPANTPAELPAPSGE
AVKPMPAARAVPNVDPSLFNAQQQGGVQLSPEDFTKAQKYCKYAGSALQYEDVGTAIQNL
QKALKLLTTGKE
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacatgatcaagtctttctacacctccagtttgctgattgacgtcctgactgtt
tttggggagctgtcagaggagttgaaacagtttcctgtgttttcttcctgcatttcagat
gagtttggagccgaaggtttctcaggacagagcttctcacacggaggctccttcagggca
gatcttccctctcaggaccagaattcaaatcaaggtccagccccaggaatcggcttctct
caggatcctggatcggctccagggggccaacctgcctcaaattacaacaacatccagatc
ccaccgggggcccacgcaccggccaacactccagcagagctgcctgccccttcaggagaa
gctgttaaaccgatgcctgcagcccgagccgttcctaatgttgatccgtctctattcaac
gcccagcagcagggcggcgtccagctctccccagaagacttcaccaaggcgcagaaatac
tgtaagtacgctggcagcgccctgcagtacgaggacgtcggcacagccatccagaacctc
cagaaagccctgaagctcctcaccaccggcaaagaatga
DBGET
integrated database retrieval system
