Cyprinodon variegatus (sheepshead minnow): 107095577
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Entry
107095577 CDS
T06110
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107095577
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107095577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Ank_5
Motif
Other DBs
NCBI-GeneID:
107095577
NCBI-ProteinID:
XP_015247212
Ensembl:
ENSCVAG00000008007
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MAQLFYKKTDNSSYNDRLPLRIVRAEAELSPMEKVYLGAVERGDYASVKQALDEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSYNIHLGDALLHAIRKEVVGAVELLLNHKK
PRGEKQIPPILQDRQFSDFTPDITPIILAAQTNNYEIIKLLLQRGVSVPQPHAVRCNCVD
CMSNSDVDSLRNSRSRLNIYKALSSPSLIALSSEDPFLTAFQLSWELKELSTVENEFKSE
YEELSHMCKQFAKDLLDQTRSSKELDIILNYRDNINPLMDENTNDLARLKLAIKYSQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKLVTCIFIGFLFPLFSIFYLIFPKSRYGKFIR
KPFIKFICHTSSYLTFLILLFLASQHIDSDDQDRPAANYKGPKPSSIEWMILPWVLGFIW
AEIKQMWDSGLKDYMDDWWNIMDFIMNSLYLATISLKIVAYTKHSGYDQRNNWETFHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLH
QLYFYYKTDGVNNCTGIRCQTQNNAFSSLFETLQSLFWSVFGLIALHVTNVQANHTFTKF
VGTTMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPS
PFNIIPSPKSVYYLLKWIQTNLFKKSSKKSFDSFETLGVRSIMRAAENVRLNHEYQEVLK
NLVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMLKSKPHCGGTSPVASTTL
AYPGNSFKYCRKPAANERQKEPSMLDPKSPVVLQSKAAKTTNSPCSSEKRNCSVVVWSTE
KTEREISKKQSNPESEKQISLLKCDEPSSFSREQN
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggctcaactattttacaagaaaacggacaattcctcatataatgaccgcctcccgctg
cggattgtgcgagcggaggctgagctctctcccatggagaaagtctacctgggggccgtc
gaaagaggggattatgcgagtgtaaagcaagcgttggatgaggctgagatctacttcagg
atcaacatcaactgcattgaccccctgggacgcacggcccttcttattgccattgaaaac
gagaacctggagataatagagctcctgctcagttataacatacacttgggagatgctctg
ctgcacgcaatacgcaaagaagtagtaggagcagtggaactgctactaaatcacaagaaa
ccacgtggagaaaaacagatcccccctattctacaggacagacagttttcagacttcact
ccagacatcactccaataatccttgcagctcagacgaacaactatgagatcattaaactg
cttctgcaacgaggtgtttccgtacctcagccacatgctgtgcgctgcaactgtgtggac
tgcatgtcaaactcggacgtggacagcctgcgtaactcacgctctcgtcttaatatctac
aaggccctctccagcccatctctcattgccctctccagtgaagatccgttcctcacagca
ttccagctcagctgggagctgaaggagctcagcacagtggagaatgagttcaaatcagag
tatgaagagttgtcccatatgtgcaaacaatttgcaaaggaccttctggaccagactcga
agctccaaagagctggatataattctgaattaccgagataacatcaatcctctgatggat
gagaacaccaatgaccttgcccgcttaaaactggcaatcaaatattcccagaaggagttc
gttgctcaacccaactgccagcagcttcttgcatctcggtggtatgatgaattcccaggc
tggaggaggcgtcactgggcagtgaagctcgtcacctgcatcttcattggcttcctcttt
cctttgttttctattttctacttgatttttccaaagagtcgctatgggaaattcatccgt
aaacctttcatcaagtttatctgccacacttcgtcctacttgacctttctcatcctgctc
ttcttggcttcgcagcatattgactctgatgaccaggaccgtccagctgcaaactataag
ggcccaaaacccagctctatagaatggatgatcctgccttgggtgcttggtttcatatgg
gccgagatcaaacaaatgtgggatagtggtttaaaggattacatggatgattggtggaac
ataatggacttcataatgaactccttgtatcttgcaactatttcactaaaaattgttgca
tatacaaagcacagcggatacgaccaaagaaacaactgggaaacgtttcatccaacgttg
atagcagaagcattatttgccattgctaacatcttcagttccttacgtctgatcagtctt
ttcactgccaactcgcatttaggccccttacagatttcattgggccgcatgcttctggac
atcctcaagtttctgttcatctactgtcttgtgcttttggcctttgccaatggtcttcat
caactctatttttattataaaacagatggtgttaataactgcacagggattcgctgccaa
actcaaaataatgccttttcatcgttgtttgaaacccttcagtcactgttctggtctgtg
tttggtctgattgctctccatgtcaccaatgtacaagcaaaccatacatttaccaaattt
gtgggcactactatgtttggcacctacaatataatctccctggttgtacttctgaacatg
ctcattgcaatgatgaacaactcctaccagcacattgctgatcatgcagacatagagtgg
aaattcgcaaggacaaagttatggatgagctattttgaagaaggcgggactttaccatcc
ccattcaatatcataccaagcccaaaatcagtgtattatttattaaagtggattcaaaca
aatttgttcaagaaatccagcaaaaaatcctttgactcatttgagactttgggggtaagg
agcattatgcgagcagcagaaaatgtcagactaaaccatgaatatcaggaggttttaaag
aaccttgtgaagcgctatgttgcggcaatgattagagatgccaaaactgaagaaggattg
acagaggaaaacttcaaggagctgaagcaagatatctctagcttccgctatgaagttttg
ggaatgttaaaaagtaagcctcactgtggggggacaagtccagttgcaagcacaacattg
gcatatcctggaaattcctttaaatattgtcgtaaacctgctgccaatgaacgtcagaaa
gagccaagcatgttggatccaaaatccccggtcgtcctgcagagtaaagcagcaaagacc
accaactctccatgctcaagtgaaaaaaggaattgttctgttgttgtgtggagcacagaa
aagactgagagagaaatatccaaaaagcagtcaaaccctgaatctgagaagcaaatctcc
ctcctaaaatgtgatgaaccaagctccttctctagggaacaaaactga
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