Cyprinodon variegatus (sheepshead minnow): 107098350
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Entry
107098350 CDS
T06110
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03420
Nucleotide excision repair
cvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107098350 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
107098350 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107098350 (ercc8)
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107098350 (ercc8)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
107098350 (ercc8)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
107098350 (ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
107098350
NCBI-ProteinID:
XP_015251477
Ensembl:
ENSCVAG00000011371
UniProt:
A0A3Q2CUP3
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MLGFLSARQTGLDDPLRLRRAESTRRVLSLKLNPDRDVDRIHGNGINAIDIETIEGRYML
SGGADGVIVIYDLENHSGKQQYTCRPVRTVGRSSRHVHRFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKNPKIQLCDLKSGSRIH
VLQGHRAEVLSVRWSPRYEYILATASADSKVKVWDVRRASGSLFTLDQHNGEKSKASSEA
VNTAHNGRVNGLCFTSDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVCNESRKRLQFSV
SHGCSPEFVFVPCGSSVAVYTLHTGELITMLRGHYNNVDCCEFHPDYQELYSGGKDGNLL
AWVPVVRNPDVEEDSKDEKRGAAGLPAVNPAFQDTWSSDED
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttagggttcctatcagcgaggcagactggtctggacgatccactgcggcttagacgt
gcagaatcaacgagaagagtcctcagtctgaagttaaatcctgacagagatgtggaccga
atccacggaaatgggattaatgccattgacattgaaacaattgaagggagatatatgttg
tctggaggagcagacggagtcattgtcatctatgacctcgagaaccacagtggaaaacaa
caatacacctgcaggccagtcaggactgttggaaggtcaagcagacacgtccacagattc
agcgtggagacagtccagtggtatccttatgatacagggatgtttgtctccagttccttt
gataagaccatgaaagtgtgggacacagaaacattaaaaccagctgaagtgttcgagttt
gagggcaacgtctacagtcaccacttatcacccattgcaaggaaacacagtctcattgca
gtcggcaccaaaaaccctaaaatccaactgtgtgacctgaaatcgggctcacggatccac
gttcttcagggtcacagagcagaagttctgtccgtgcgatggtcgccaagatacgagtat
atcttagccactgccagtgcagacagtaaggtgaaggtttgggacgtgcgccgagcttca
ggtagtctttttactttggatcaacataatggagagaagtcaaaggcctcctctgaagca
gtaaacacagcccataacggcagagtgaatggcctttgctttacatctgatggcctctac
cttttaaccaccgggacagatgaccgcatgagactatggaatagtgctacgggggaaaat
acgctggtaaattatgggaaggtctgcaacgagagtcgtaaacggcttcagttctccgtg
tctcacggctgcagcccagagtttgtgtttgtgccatgcggcagctcagtggccgtctac
actctccacacaggagagctgatcactatgctcaggggtcactacaacaacgtggactgc
tgcgagttccacccagactaccaggagctgtacagtggtgggaaagatggtaacctgctg
gcatgggttcctgtcgtccgtaatccagatgtggaagaagactcaaaggatgagaaaagg
ggtgctgctggccttcctgctgtgaaccccgcctttcaagacacctggagcagtgatgaa
gattaa
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integrated database retrieval system
