Cyprinodon variegatus (sheepshead minnow): 107100029
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Entry
107100029 CDS
T06110
Symbol
bbx
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107100029 (bbx)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107100029 (bbx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107100029
NCBI-ProteinID:
XP_015253853
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All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MTGCSSFVFIIHSAFSSFFLQYDSTMKSGGKAKMPPAEEVTSKRPKRKCLQWHPLLSKKA
SEFSEGEEEEDEEELGKQCSEDQNPPVQSVRSTEEAEEDSSEQRARRPMNAFLLFCKRHR
SLVRQEHPRLDNRGATKILADWWAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTSK
PLKSSSCQPLGFPRKKVWSFSCNSSKESTVKKEPKSDSLHQLNFAMADPTKMGGLSMLLL
AGEHALINREIPPCTKAALPDRASRGKPLSEETDETFAQTIPNRLPDVAEDDGRMKTGLS
LVEERSLSATVEGKPCRQSALFQLAEMCLASEAGNIDAIVSQPDDNCSTATLKQTFLKSE
VKEEGGEPDPCTPTHTSAPPSVTSTSTDATPPPQHESQSGCVKKKNKKIDGVKLNDIKCP
ENTVAKNCQQAESNVDRTIEAVARGVWIDKEDKTKRKTCPSLSVRNPGLPQKKTKTKVKT
PVKAKEEELENGSEQHESSDMETNTAAPCIVPPTEAEGVDTDITGPQICMQDFPQSPSGQ
SPTKPKEEDQEKHKEKAGDMTWELNKHSHGSRKSERSCKGALYKTLVSEGMLTSLRANID
RGKRGAFRAFDHDTNWTQESWTVSHTGPSNTKKLKKSKSKDESSQSLGKLEEEFEKKFNS
LPQFSPLTFDKKGTAVAKKKKTDCSSNLEDSSKGPKVDQSDSFPLDSVSEAKSSTLINTM
FPDVYSATSSMEMLVGSQKRKARKTKITHLVRTADGSVSPAEKNKARDLNQEEDKKPSNQ
QNLCNENRCYSAPQADEVRRSTLPQELPALFSLAALAEVAAMENVHKGQRSLAQSQKKEL
AQTPLLISCADQ
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgacgggttgttccagctttgtcttcatcattcattcagcattttcatcattttttctt
cagtacgatagtaccatgaagagtggaggaaaggctaagatgccgcctgcagaggaggtc
actagcaaaagaccaaaacgcaaatgcctgcagtggcacccccttctttcaaagaaggcc
tctgaattctctgagggagaagaggaggaagatgaagaggagcttgggaagcagtgcagt
gaggaccagaaccccccagtgcagagcgttaggtccacagaggaagctgaggaggactcc
agcgaacagcgggcacgtcgacctatgaatgccttcctcctcttctgcaaacgccatcgc
tccctggtgagacaggagcatcctcgtctagacaaccggggggccaccaaaatcctggcc
gactggtgggccgtgctggagcccaaggagaagcagaagtacaccgatatggccaaggag
tacaaggacgcctttatgaaggccaaccccggctacaagtggtgtcccaccaccagcaaa
ccactcaagagctcctcttgtcagccgctcggctttcctcggaaaaaagtttggtctttc
tcttgcaactcatccaaggagtccacagttaagaaagagcccaaaagcgacagtttgcac
cagctgaactttgctatggcagatccaacaaagatgggcggcctgagcatgctgctgtta
gctggagaacacgccctcatcaacagggagatccctccctgcactaaagctgcattacct
gacagagccagtagaggaaagcccctttcagaggaaactgatgagacatttgcccagacg
attcccaacaggctgcctgacgtggctgaagatgacggcaggatgaagactggcctttca
ttggtggaggagcgttccttgtccgccaccgttgaaggaaaaccatgcagacagtcggcg
ctcttccagctcgctgagatgtgtttagcatcagaagcaggaaacatagacgccatagta
tcccagccagacgacaactgctccacagcaactctcaaacaaacctttctgaagtcagaa
gttaaagaggaaggcggagaacctgacccctgtacgcccactcacacatcagctcctccc
tctgttacatctacctccaccgatgccacaccccctcctcagcatgaaagccaaagcgga
tgtgttaagaagaaaaacaagaagattgatggggtcaagttgaacgacatcaagtgtcca
gagaacacagtcgccaagaactgtcagcaggctgaatcaaatgtggatcgcacgattgaa
gctgtggccagaggagtctggatcgacaaagaggacaaaaccaagaggaagacctgtccc
agtctgtcagttagaaaccctggtctgcctcagaagaaaacaaagaccaaagtgaagaca
ccagtcaaagcaaaagaagaggagttggaaaatggcagtgagcagcatgagtcctctgat
atggagacaaacacagcggcgccatgcatagtacccccgactgaagcagaaggtgttgat
actgacatcacaggcccccagatctgcatgcaagacttcccccagtctccttctggccaa
tcacccactaagcccaaagaagaggaccaggagaagcacaaggagaaggcaggtgacatg
acctgggagctaaacaaacacagccacggctccaggaaatcagagcgcagctgcaagggt
gccttgtataaaacgcttgtgtctgagggaatgctgacgtcactgagagccaacatagac
agaggtaaaagaggagctttccgcgcttttgatcacgatactaactggactcaagaaagc
tggacagtttcacacacaggaccaagtaataccaagaagctaaagaaatccaaatccaaa
gacgagtcttcacagagcctcgggaaactggaggaggagtttgaaaagaagtttaacagc
ctgccgcagttcagccccctgacctttgataagaaagggacggctgtggccaagaaaaag
aagactgactgctcctctaacctggaggactcctctaaaggcccaaaagtagatcagagt
gattccttccctctggattccgtttctgaagccaaatcctctactctcatcaacaccatg
tttccagatgtctacagcgccaccagcagcatggagatgctggtcggcagccagaagagg
aaggctaggaagaccaagatcacgcacttggtgcgcacggctgatggcagtgtttctcct
gctgagaaaaacaaagccagggatctaaaccaggaagaggataaaaagccatcgaaccaa
cagaatttatgcaatgaaaacaggtgctacagcgctccacaggcggacgaggtgaggagg
agcaccttaccacaagagctacctgctctcttcagcttggctgccctggccgaggtagca
gccatggaaaatgttcacaaaggccagaggagcttggctcagagccagaagaaggaactt
gcacaaactccgcttctcatctcgtgcgccgaccagtga
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