Cyprinodon variegatus (sheepshead minnow): 107102786
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Entry
107102786 CDS
T06110
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107102786 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107102786 (rad54l)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107102786 (rad54l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
107102786
NCBI-ProteinID:
XP_015257700
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All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MRRSLAPSQLAKRRAAGEDGGPPGSTEKRRRLEELREIHVSPHRKPLRPIINWPVEVDKH
EAFIRNILSKPFKVPIPNYSGPLGSRALGLRHAGVRKALHDPFAEDALVLYEPPALGAHE
LIKADKEKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRIPGSYGCIMADEMGLGKT
LQCIALMWTLLRQSPDATPEIDKAIVVSPSSLVRNWYNEVAKWLGGRLSPLAIDGGSKEE
IDRKLVNFTSQRGSRAPTPILIISYETFRLHANVLHRGKAGLVICDEGHRLKNADNQTYQ
ALNAMDAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGRDADAS
NRDRQEGEEKLKELIGIVNRFCSHLILSSGLGKMLVLDYILAVTKSTTSDKVVLVSNYTQ
TLDLFEKLCRFRRYLYVRLDGTMSIKKRAKVVETFNSPHNPEFIFMLSSKAGGCGLNLIG
ANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYVYRLISTGTIEEKILQRQAHKKALSSC
VVDEEQDVERHFSLGQLRELFTLSEETHSDTHDKFHCRRCVNGREVRPPPEGTDCTSDLS
QWNHCSDKKGLRDQVLKASWDSAVSFVFHQRSHENQKGVA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagcctggcccccagtcagctggctaaacgcagagcggccggagaggacggc
ggcccgcctggaagcaccgagaagaggaggaggttggaggagctgagagagatccacgtt
tctccccacaggaagccgctcagacccatcatcaactggcctgtggaagtagacaaacat
gaggcctttattcggaatattctctccaaaccctttaaagttcctattcccaactactca
ggtccactgggaagcagagcacttggtctgagacatgcaggagttaggaaggcgctccat
gatcccttcgcagaagatgctttggttctttatgagcctccagctctcggcgctcatgag
ctgatcaaagctgacaaagagaagctcccggtccacgttgtggtggatccagtattagga
aaagttctccgtccccatcagagagagggcgtgaagttcctgtgggagtgcgtgaccggc
agacgcatccccggatcgtacggctgcatcatggctgacgagatgggcctgggaaagact
ttgcagtgcatcgctctcatgtggaccttgctgcgccaaagtcccgatgctacgccagag
atcgataaagccatcgtcgtgtcgccgtcgagcctggttcggaactggtacaacgaagtg
gcaaagtggctgggaggtcgcctttcgccattagccatcgatggcggctcgaaggaggag
atcgataggaagctagttaacttcacctcccagcgtggatcgagggcacccacacccatc
ctgatcatttcctacgagacgttccgacttcacgccaacgtcctgcacagagggaaagct
ggactggtgatctgtgacgagggtcaccgactgaagaatgccgacaaccagacctaccaa
gctctgaatgcaatggacgcccagcggagggtgctgatctcaggcacacccatccagaac
gacctcctggagtacttcagtctggtccactttgtaaacgccggaatcctgggcaccgcc
caggagtttaagaagcgcttcgagctgcccatcctgaaggggagagatgcagacgccagc
aaccgagaccggcaggaaggagaggagaaactgaaggagctcattggcatcgtcaacagg
ttctgctcccatttgatcctgtcctctggtctaggtaagatgctggttctggactacatc
ctggcggtgaccaaatccaccaccagtgataaggtggttctggtgtccaactacacccaa
accctggacctgtttgagaagctgtgccgctttagaaggtacctctacgtccgactggac
ggaaccatgtccatcaagaaaagggccaaggtggtggagaccttcaacagtccacataac
cccgagttcatcttcatgctgagcagcaaggcaggggggtgtggcctcaatctgatcggc
gccaaccgcctggtcatgtttgaccccgactggaacccagccaacgacgagcaggccatg
gcccgggtgtggagagacggccagaagaagacctgctacgtctacagactgatctctacg
gggaccatcgaggagaagatcctgcagagacaggcccataagaaagcgctgagcagctgc
gtggtggacgaggagcaggacgtggagcgccacttttccctgggacagctccgcgaactc
ttcaccctcagcgaggaaacccacagcgacacgcacgacaagtttcactgccgccgctgc
gtcaacggcagagaggtccggccgcctccggaaggaaccgactgcaccagtgacctctcc
cagtggaaccactgctctgacaagaagggactgagagaccaggtgctgaaggcgtcctgg
gacagcgccgtctcctttgtcttccatcagcgctcccatgagaaccagaagggcgtggca
taa
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