Cyprinodon variegatus (sheepshead minnow): 107102817
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Entry
107102817 CDS
T06110
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107102817
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107102817
Transporters [BR:
cvg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107102817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
107102817
NCBI-ProteinID:
XP_015257737
Ensembl:
ENSCVAG00000017466
UniProt:
A0A3Q2D8F9
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MTAEKSGPVINGKPEDGRDSDGSSSSLDNDEYNERGMWNNKIEFILSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYA
TQVIEAHLNVYYIVILAWAIFYLFNCFTTELPWAGCGHYWNTENCIDYYGENSTNITNPN
ATSPVIEFWERRVLKISDGIEHMGGMRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYVMLLVLLIRGITLPGAFDGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNSYNNNCYRDCLMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWACLFFMMLIFLGLDSQFVCVESLVTAVVDMYPETFRKGYRREL
LILCMSIVSFLIGLIMCMEGGMYVFQLFDAYAASGMCLLFVAIFESICIGWVYGGDRFYL
NIEDMIGYKPFFLIKWCWMILTPGICAGIFLFFLIKYKPLKYNNVYIYPDWGYGIGWFMA
MSSMVCIPVGIIWMIWKTPGTFSERMKKLTTPSPDLKMRGKLAALSPYAVNDAKLKADGK
VSTISEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagaagagtgggcctgttataaacggtaaaccagaagatggcagagactcg
gacgggtccagttccagccttgacaatgatgaatacaatgaaagagggatgtggaacaac
aagattgagttcatcctgtctgtggctggagagatcattggcctgggaaacgtctggaga
ttcccatatctctgctacaaaaatggaggaggtgccttcttcgttccatatgtcatcttc
tttgtgtgctgcggtatccctgtgtttttcctggagacggcattgggtcagttcacaagt
gaaggaggtatcacatgctggaggaaagtttgcccattgttcgagggtattggctatgca
acacaggtgattgaagcacatcttaacgtgtactacatagtgatcttagcctgggccatc
ttctacctcttcaactgttttaccactgagctgccatgggctggctgtggacattactgg
aatacagaaaactgcattgattattatggagaaaattccaccaacatcaccaaccccaat
gcaacatctccagtcattgagttctgggaacgcagagtcctgaagatatcagatggtatt
gagcacatgggagggatgcgctgggagctggcaatgtgtctggctcttgcctggttcatc
tgctacttctgcatctggaaaggacccaagtcaactggcaaggttgtttatgtaacagct
acctttccatacgtcatgctgctggtcctcctgatcaggggaatcacactgcctggagct
tttgatggcatcaaattctacctctacccagacatttcacgtctctctgaccctcaggta
tgggtggatgcaggaacccaaattttcttttcctatgctatctgtctgggctgtctcact
gctcttggaagttacaattcttacaacaacaactgctacagggattgcctcatgctatgt
tgtctgaacagcggaaccagctttgttgcaggttttgctattttctccgtcctgggtttt
atggcctatgaacaaaatgttccaatagaggctgtagctgaatctggtcctggtcttgca
ttcattgcataccccaaagctgtaactatgatgcctctgtctccactttgggcttgtctc
ttctttatgatgctgatcttccttggcttggacagtcagtttgtgtgtgtggaaagttta
gtgacagctgttgtggacatgtacccggagactttccgaaagggttaccgcagagagctg
cttattctttgcatgtccatagtatccttcctaataggactcatcatgtgtatggaggga
ggaatgtatgttttccagctgtttgacgcatatgctgccagtgggatgtgcttgcttttt
gtggctatatttgagtccatatgcatcggatgggtgtatggaggcgacagattctaccta
aatatcgaggatatgattggatacaaacctttcttcttaatcaaatggtgctggatgatc
ctgaccccgggcatctgtgctggaattttcctcttcttcctgattaaatacaaacctctc
aagtacaacaacgtgtacatctatcccgattggggctatggcatcggctggtttatggcc
atgtcctctatggtgtgtatcccagtgggtattatctggatgatctggaagactcctgga
accttttctgagagaatgaagaagctgaccactcccagccccgacctaaaaatgagaggc
aaacttgctgccctcagtccttacgctgtcaatgatgccaaacttaaagcagatggaaaa
gtatccaccatttcagagaaagagacacatttctaa
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