Cyprinodon variegatus (sheepshead minnow): 107103666
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Entry
107103666 CDS
T06110
Name
(RefSeq) troponin C, skeletal muscle-like isoform X1
KO
K12042
troponin C, skeletal muscle
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04020
Calcium signaling pathway
cvg04814
Motor proteins
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107103666
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107103666
04820 Cytoskeleton in muscle cells
107103666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107103666
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
107103666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_FSTL1
EF-hand_9
AIF-1
EH
SPARC_Ca_bdg
Motif
Other DBs
NCBI-GeneID:
107103666
NCBI-ProteinID:
XP_015258941
LinkDB
All DBs
Position
Unknown
AA seq
212 aa
AA seq
DB search
MDRLSIRIFSYLGLLPTDAQTDARSFLTEEMITEFKAAFDMFDTDGGGDISTKELGTVMR
MLGQNPSREELDAIIEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRIFDK
NGDGFVDREEFGDILHMTGEQVTEEDIDEMFGESDTNKDGKIDFDGKTELLAAFYRNHLI
IKPTTKEKSFYFQLYIYYNYQHTDQSENSQST
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcctatcgattcggatttttagctatttgggtctcctgcccaccgacgcccaa
accgatgcccgctccttcctgactgaggaaatgataacagagttcaaagctgccttcgac
atgttcgacacagacggaggcggtgacatcagcaccaaggagctgggcaccgtgatgcgg
atgctgggccagaacccgtctagagaggagctggatgccatcattgaggaggttgatgag
gatggcagcggtactatcgactttgaagagttcctggtcatgatggtgcagcagctgaag
gaggaccaggccggcaagagcgaagaggaactttcagagtgtttccgcatctttgacaag
aacggagacggttttgttgaccgggaagaatttggagacatccttcatatgactggagaa
caagtcacagaagaagatattgatgaaatgtttggtgaatcagacacaaacaaagacgga
aaaatagattttgatggtaagactgagcttttagcagcattttacagaaaccaccttata
atcaaacccactaccaaggaaaagagtttttatttccagttatacatttattataactat
caacacactgatcagagtgaaaacagtcagtccacctga
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