Cyprinodon variegatus (sheepshead minnow): 107104203
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Entry
107104203 CDS
T06110
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic-like isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00260
Glycine, serine and threonine metabolism
cvg00630
Glyoxylate and dicarboxylate metabolism
cvg00670
One carbon pool by folate
cvg01100
Metabolic pathways
cvg01200
Carbon metabolism
cvg01230
Biosynthesis of amino acids
cvg01240
Biosynthesis of cofactors
Module
cvg_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
107104203
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
107104203
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
107104203
Enzymes [BR:
cvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
107104203
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Paralog
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Motif
Pfam:
SHMT
Aminotran_1_2
PqqD
Motif
Other DBs
NCBI-GeneID:
107104203
NCBI-ProteinID:
XP_015259635
Ensembl:
ENSCVAG00000016460
UniProt:
A0A3Q2FZ33
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MMTGPLDISDLEVFSIIKKLKHNQMHSLELIAAENFTSRAVLEALGSCLTNKYSKGFPGQ
SHYFNGLEYNDELENLCQRRALEAFGLDSEKWGVNVRPYSGSPANFAVYTAVVGPHGRIM
GLDIPDGGHLSHGYMRNEKKISATSMFFETMPYKVNPKTGYIDYDKLQENAQLFQPKLII
AGTSGYSRNLDYARLGQIANENNAYLLGDMAHISGLVAAGVVPSPFEHCDLVTTTTHKSL
RGCRGGLIFYRKGVRCVDSEGKETLYNLEFLINHAVFPALNGGPHSNAIAGVAVALKQAM
TPEFKAYQLQVLANCKALCSALTELGYKIVTGGSDNHLMQLDLSDKGTKGEQAEKVLQAC
GISCNTNTFLGAKSALLPSGLRFGSPALTSRGLIEEDFKKVADFIHRGIELTLEVQRSLD
SKATVEDFIQALALEEKFQQEVAEIRAEVEAFARQFPMPGLPDR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagggcctctggatatcagcgacttagaggtgttctctatcataaaaaagctg
aaacacaaccagatgcatagtctggagttaatagcagctgagaactttaccagcagagct
gttctcgaggctcttggctcctgtctgaccaacaagtactccaaagggtttcctggccag
agccactatttcaatggtttagagtataatgatgaactggagaatctttgtcagaggagg
gcactggaggcctttggtttggactctgagaaatggggagtgaacgtgcggccatactca
ggttcgcctgctaactttgctgtctacacggctgttgttgggcctcatggtaggatcatg
ggcttggacattcctgatgggggtcacctatcccatggctacatgaggaatgagaagaaa
atctctgcaacatccatgttttttgaaactatgccatacaaggtaaatccaaaaactggc
tacatcgattatgacaaactgcaagaaaatgcacagcttttccagcctaagctcatcatt
gccggaaccagcggttattcccgtaaccttgactatgcccgcttggggcagattgctaat
gagaataatgcatatctgttgggggacatggcacatattagtggattagtggccgccgga
gtggtgccctcaccttttgaacactgtgaccttgttacaacaacaactcacaaaagtctg
agaggctgccgtggtggacttatcttttatcggaaaggtgttcggtgtgtggattccgaa
gggaaggagactttgtacaacttggagtttttgatcaaccatgctgtgtttccggcgctg
aacggaggaccacacagcaatgctattgcaggtgttgctgtggctctcaaacaagccatg
acacccgagtttaaggcataccagctgcaggttcttgctaactgtaaagctctgtgcagt
gcccttacagagcttggttacaagatcgtcactggtggttctgacaaccatctaatgcag
ctggacttaagtgataaaggaacaaaaggagaacaagctgagaaggtcttgcaagcctgt
ggtatttcctgcaacacaaacacctttttaggtgctaagagtgctttgcttccaagtggt
ctgaggttcggttctccagctctgacctccagaggtttgatagaagaggacttcaagaaa
gtggctgacttcattcatagaggtattgagctaactttggaagtgcagagaagtttggac
tccaaggccaccgtagaggacttcatccaggcattggctttggaagagaagttccagcag
gaggtggctgagatcagggctgaagtggaggctttcgccaggcagttccccatgccggga
cttcctgatcgttaa
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