Chromobacterium violaceum: CV_3038
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Entry
CV_3038 CDS
T00147
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi00540
Lipopolysaccharide biosynthesis
cvi01100
Metabolic pathways
cvi01250
Biosynthesis of nucleotide sugars
Module
cvi_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CV_3038 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cvi01005
]
CV_3038 (rfaD)
Enzymes [BR:
cvi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CV_3038 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cvi01005
]
Core region
CV_3038 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AAQ60707
LNCC_Brazil:
CV3038
UniProt:
Q7NTL6
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All DBs
Position
complement(3316286..3317287)
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AA seq
333 aa
AA seq
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MTIVVTGAAGFIGSNLVKGLNQRGITDIIAVDNLSNGDKFHNLVDCEISHYLDKHEFLHL
LLDGEYEGELSAILHQGACSDTMNHDGKYMMDNNYQYTLALFDYCQHEEIQFLYASSAAT
YGKGTVFKEERQHEGPLNVYGYSKFLFDQVLRQRIKEGLSAQAVGFRYFNVYGPREQHKG
RMASVAFHHFNQYREHGKVKLFGGWDGWENGMQSRDFVSVEDVVKVNLFFLDNPGKSGIY
NLGSGRSQPFNDVAEATVNACRRHEGKPALTLAEMIQQGIVEYIDFPDALKGKYQSFTQA
DIAKLREAGYAEAMLSVAEGVDRYVDWLIGRQG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgactatcgtcgtcaccggcgccgccggcttcatcggctccaatctggtcaagggactg
aaccagcgcggcatcaccgacatcatcgccgtcgacaatctcagcaacggcgacaagttc
cataacctggtcgattgcgaaatctcgcactacctcgacaagcacgaattcctgcacctg
ctgctggatggcgagtacgagggcgagctgtccgccatcctgcaccagggcgcgtgctcg
gacacgatgaaccacgacggcaagtacatgatggacaacaactaccagtacacgctggcg
ttgttcgactattgccagcacgaggaaatccaattcctgtacgcgtccagcgccgccacc
tacggcaagggcacggtgttcaaggaagagcgccagcacgaaggcccgctcaacgtctac
ggctactccaagttcctgttcgaccaagtgctgcgccagcgtatcaaggaaggcctgtcc
gcccaggctgtcggtttccgctacttcaacgtctacggcccgcgcgagcagcacaagggc
cgcatggcttcggtggcctttcaccacttcaaccagtaccgcgaacacggcaaggtcaag
ctgttcggcggctgggatggctgggaaaacggcatgcagagccgtgatttcgtgtcggtg
gaggatgtggtcaaggtcaacctgttcttcctggacaatcccggcaagagcggcatctac
aatctgggcagcggccgttcgcagccgttcaacgacgtggccgaggccacggtgaatgcc
tgccgccgccacgagggcaagccggcgctgacgctggctgaaatgatccagcagggcatc
gtcgagtacatcgacttcccggacgcgctgaagggcaagtaccagagcttcacccaggcc
gacatcgccaagctgcgcgaagccggctacgccgaggccatgctgtcggttgccgagggc
gtcgaccgctatgtcgactggctgatcggccgccagggctga
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