Calliphora vicina (urban bluebottle blowfly): 135961607
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Entry
135961607 CDS
T10781
Symbol
Upf3
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03013
Nucleocytoplasmic transport
cvj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135961607 (Upf3)
03015 mRNA surveillance pathway
135961607 (Upf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135961607 (Upf3)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
135961607 (Upf3)
mRNA cycle factors
P-body specific factors
135961607 (Upf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
135961607
NCBI-ProteinID:
XP_065369206
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All DBs
Position
5:complement(89822984..89827009)
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AA seq
496 aa
AA seq
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MAKDEKTGTKRSRRVRGRDKAKPPTKIVMRHLPPTMTEEEFLKQIDPLPDHDFYYFAEAD
WSLGFDATCRAYITFKNYDDVFLFRDRFDGYVFVDNKGNEYAAIVEFAPLQGFIKNKSRG
SDNLVNTIEQESHYQQFINKLEEEREAAAKGGETKLEFSLESKKEEITSTPLLQYLATKK
EKRREDAKKRTAEKKRRREEEKEKRKENQPTPQPIKLLRSETIHQEVEKPEQKTNQTREE
PKNARARRREERNRLRHEAYLQKKKAFDEQNNQGKNKEEDNKKDKANDSETKSSSDTSKS
KVILKKTAADDLTESVRNFIYIAASILPTSANEGKTEDVYRTETENKTKSTEELNKIQNK
LSKIDIHKAEQYSEDEKKPAKDTKEQGKREKLTQKQIDEKREERRIRNKDRPSIAIYQPK
ARFRVSEESDSNSASKDIVRSQSTSDCEAGKKDEQPRHKKVQRYSERSKNRKTSKETSKE
DEPQTTENVAELCTTN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatgaaaaaactggaacaaagaggtcacgtcgagttagaggacgtgacaaa
gcaaaaccacccacaaaaattgttatgcgtcacttaccacccaccatgaccgaggaagag
tttctgaagcaaattgatcccttgcccgatcatgatttctattattttgccgaagccgat
tggtctttggggtttgatgccacttgtcgtgcttatattacatttaaaaattacgatgat
gtttttctatttcgtgaccgttttgatggctatgtctttgtggataataagggcaatgaa
tatgcggccattgtagaatttgcacccttacagggtttcatcaagaataaatcacgtggc
agtgataatttggtgaataccattgagcaggaatcacactatcaacaattcataaataaa
ctggaagaagaacgcgaagcagccgctaaaggaggtgaaacgaaattggaattctctttg
gaatccaaaaaggaagaaattacatccacaccactgctacaatatttggccactaagaaa
gagaaacgccgtgaggatgccaagaaacgtacggctgaaaagaaacgtcgtcgtgaagaa
gaaaaagagaaacgtaaagaaaatcaacccacaccacagccgataaagcttttaagatcc
gaaacaatacatcaggaagtagaaaaaccggaacagaaaaccaatcaaactagagaggaa
cccaaaaatgccagagctcgtcgtagagaggaacgtaatcgtttaaggcatgaggcttat
ttgcaaaagaaaaaagcctttgatgagcaaaataatcaaggtaaaaataaagaagaagat
aataaaaaagataaagccaacgacagtgaaacaaaatcctcttccgatacaagcaagtct
aaagtgattctaaagaaaactgccgctgacgatctaacagaatccgtacgcaatttcatt
tatattgctgcgtctattttaccaacatcggcaaatgagggtaaaactgaagacgtatac
agaactgaaacagaaaataaaacaaagtctacggaggagttaaataaaatacagaataaa
ttatcgaaaattgatatccataaagcagaacaatattcggaggatgagaaaaagccagcc
aaggacaccaaagagcagggcaagcgagaaaaattaactcaaaaacaaatagatgaaaag
cgcgaggagcgacgcataagaaataaggatcgtccctctattgcaatttatcagcccaag
gcacgttttcgcgtatctgaggaaagtgattcaaattctgcctccaaggacattgtacgt
agccagtctacatcagattgcgaagctggtaaaaaggatgaacagcctcgtcacaaaaag
gtgcaacgttattcagaacgctcgaaaaatcgcaagacctctaaagaaaccagcaaggaa
gatgaaccacaaacaacagaaaatgttgctgagttgtgtacaaccaattaa
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