Calliphora vicina (urban bluebottle blowfly): 135962363
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Entry
135962363 CDS
T10781
Symbol
RpI1
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135962363 (RpI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvj03021
]
135962363 (RpI1)
Enzymes [BR:
cvj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135962363 (RpI1)
Transcription machinery [BR:
cvj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
135962363 (RpI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
BUD22
Motif
Other DBs
NCBI-GeneID:
135962363
NCBI-ProteinID:
XP_065370328
LinkDB
All DBs
Position
5:complement(42951465..42970652)
Genome browser
AA seq
1666 aa
AA seq
DB search
MGTMKTYDIDMFPSDLEFSVFTGEEIKRLSVVKIITGLTFDPLGHPLPGGLYDSQMGTFG
KRMEPCTTCLNIQACPGHLGHIELNALVYNPFFIKLVQKMCNIFCVSCQKIQTKEHETEI
LILQLRLLDAGYIVEAQELEIYKSEIVLNNVETLVKLENGDNVHPRIAEMYQLLEKGQSN
KVNVTKTSCALRSAIVNAALQRPIAKRCIHCKNPLRNIRYLHRKLVYFMGIAEIKNKFEG
IEESSGQNKVIFADECRKFLRQVYDGYPELMQLLFPIIKSNANSNEKDVSPVDIFFMDTI
PVTPPKARPSNMLHNQIVEHAQTALYRNIIENNSVLRVVLRHIKGQVDEMSEEAKAAFTG
IRGGTPYEKLYNAWQSLQTSINLLLDVNMARDAPSSAGLKQVLEKKEGLIRKHMMGKRVN
YAARTVITPDPNINVEEVGIPDIFAKKLSYPVPVTPWNVAELRKMVMNGPNVHPGANYIQ
DERGYTTLIPADNAAKRESMAKLLFNYPEKGIKIVHRHVLNGDVLLLNRQPSLHRPSIMA
HKARILQGEKTFRLHYSNCKAYNADFDGDEMNAHLPQSEVARSEAYNLVNVANNYLVPKD
GTPLGGLIQDHVISGVKLSLRGRFFNREDYQQLVFQGLSHIKKNIKLLPPTIIKPIQLWS
GKQILSTIIINLIPEGYTPISLNSVAKIGDKHWMIAKNRRAVAGGTELKDTQMSESEVII
RNGELIAGVLDKQQYGATTYGLIHCMYELYGGDTSTCLLTAFTKVFTFFLQREGFTLGVK
DILVTGEADTKRRKIIQESREIGDAALASALDLTDVPALDVLSEKMEEAYIKDPKFRVVL
DRKYKTMLDNYTNDINKTCLPNGLITKFPSNNLQLMVLSGAKGSMVNTMQISCMLGQIEL
EGKRPPLMISGKSLPSFTSFETSPKSGGYIDGRFLTGIQPQDFFFHCMAGREGLIDTAVK
TSRSGYLQRCLIKHLEGLSINYDLTVRDSDNTVVQYLYGEDGLDILKSKFFDSKFGTAFL
TQNSSVILRPQELSNIKNEEELSKVNRHNKKLRSWLKKRSSAAKAHAKHISPFTEFSAEL
RNEIEVENPNEINENTGRRRIDEAIVKLWHKADDESKKLYQKKYARCPDPTNSVYGQDTT
FGSVSEKIEKIVADYIEKHPNRKDAVTDVMYVKNVKALAAPGEPVGLLAAQSIGEPSTQM
TLNTFHFAGRGEMNVTLGIPRLREILMMASANIKTPSMDIPIKANQAKAAEKLRISLNRV
TLADVLQYVNVKTQFVQQPTRTQKYELTFQFLPREAYCDDFCVKPKQILRFMSSKFFGVL
FRAIIKSNKSKAVVIEMGETQKDDSNNDEKLDADDGENGSSENNKKSKSNVTSNDNDNDS
SDEEGANDDGDDATGIKLKSRKVDETEYDDPDDADELMDADDDEDANDDGFFDTEAVEDN
SEDVENEKGDKKIEKILDNALVESYVYDEKHYLWAKLTFNLDMKYKQPNISSIIKELVQK
TVIHQVDKIKRAIIYKGNQDEQTLKTDGINIVEMFKHNTILDINRLYSNDIHAIARTYGI
EAAGQVIVQEVTNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKGMEHSSSPLQQMSF
ESCLQFLKNAAAAGYGDELNSPSSRLMVGLPVKNGTGAFDLLTKIC
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgggtacgatgaaaacttatgatatcgacatgtttccaagtgacttggaattctccgtt
tttactggagaggaaatcaaacgtctcagtgtggtcaagattattactggacttacgttc
gacccattggggcatccgctcccaggtggtttatatgacagtcaaatgggtacttttggt
aaacgcatggagccgtgtacaacatgtctaaatatacaggcatgccccggtcacttgggt
cacattgaattgaacgccctggtatataatccattttttattaagcttgtgcaaaaaatg
tgcaatatcttttgtgtgagttgtcaaaaaatacagaccaaagaacacgaaactgaaatt
ctgatactacaattgagacttcttgatgctggatatattgtcgaagcacaagaattggag
atatacaaatcagaaattgtgttaaacaacgtcgaaacattagtgaaattggaaaatggc
gacaatgtccatcctcgtattgctgaaatgtatcaactacttgagaagggacaaagtaac
aaggtgaatgtgactaaaacttcatgtgcccttcgatcagctatagttaacgcagcactt
caacgtccaattgccaagagatgtatacattgtaaaaatccattgcgaaatattcgatac
ctacatcgaaaactagtctactttatgggcattgctgaaatcaaaaacaagtttgagggt
atcgaagaatcaagtggtcaaaataaagtaatatttgccgatgaatgtcgcaaatttttg
cgtcaggtgtatgacggctacccggagttaatgcaacttctatttcctatcatcaaaagt
aatgcgaattccaacgaaaaagatgtttctccagttgatatatttttcatggacacaata
ccagtaactccgccaaaagctcgtccttcaaatatgttacataatcaaattgttgagcat
gctcagacggctctttatcgtaatataattgaaaacaactcagtgctacgagttgtattg
aggcacatcaaagggcaagttgacgaaatgtctgaggaagctaaggctgcattcaccgga
attagaggaggaacaccatatgaaaaactatataatgcttggcaaagtttgcagacatct
ataaatttactattagatgttaatatggcgagagacgcaccatcttcagctggtttgaaa
caagtcctggaaaagaaagagggtctaatacgcaaacacatgatgggaaaacgtgttaac
tatgcagcccgtactgtcattacgcctgatcccaacattaatgtagaagaggttggaatc
cccgatatatttgcgaaaaaattatcttatcccgtacctgttacgccatggaatgttgca
gagttgcgtaaaatggttatgaatggaccaaatgtacatcccggtgccaattatatacaa
gacgaaagaggctacactaccctaattccggctgataatgctgctaaaagggagagtatg
gcaaaattactgtttaattatcctgaaaagggtattaaaattgttcatcgtcacgtccta
aacggagatgtgttgcttctgaatcgtcaaccatctctgcatagaccctcaattatggcc
cacaaagctcgtattttgcagggtgaaaagactttccgtctgcactactctaactgcaaa
gcctataatgctgattttgatggtgacgaaatgaatgcccatttgccacaaagtgaagta
gcgcgttctgaagcttataatttagttaatgttgccaataattatttggttcctaaggat
ggcactcctctgggtggtcttattcaggatcacgttatatcgggtgtgaaattgtctttg
cgaggacgtttcttcaatcgtgaagattaccaacaacttgtcttccaaggtttatcccat
attaagaagaatatcaaacttttgccaccgactattataaaacccatacaattgtggtct
ggaaaacagattttgtcgactataattataaatctaatacctgaaggttacaccccgata
tccttgaattccgtagcaaaaattggtgataagcattggatgattgccaagaatagaaga
gctgtcgccggtggcacagaactaaaagatactcaaatgtcggaaagtgaagtaataata
cgaaatggtgaactaatagccggtgtattagataaacaacaatacggtgccactacatat
ggtttaattcattgtatgtacgagctgtacggcggcgatacatccacttgcttgttgaca
gcttttacaaaagtttttacattcttcctgcaacgtgaaggtttcaccttaggtgtcaaa
gacattctagtcaccggtgaggcagataccaaaagacgtaaaatcatacaagaaagccgc
gaaataggagatgctgctttagcatcggccttggatttgacagatgttcccgctttggat
gtactatcggagaaaatggaggaagcttatatcaaagatcctaaatttcgtgttgtatta
gatcgtaaatacaaaacaatgttggacaattacactaatgacatcaataaaacatgtctc
cccaatggtttgataaccaaatttccaagtaataatctacaattaatggttttatctggc
gctaagggctccatggtcaacacaatgcaaatctcttgtatgttgggacaaattgaattg
gagggtaagagaccgccgcttatgatatccggaaaatcattgcctagctttacttcattt
gagacatcgcctaagtctggcggttacattgatggccgtttcttaacgggcatacaaccc
caggacttctttttccattgcatggctggtcgtgagggtcttattgatactgctgtgaaa
acttctcgttctggttatttacaacgttgtctcattaaacatttagagggtctgtcgatt
aattatgacttgacagtgcgtgatagcgacaatactgtggtacaatacctttacggagag
gatggtcttgatattttgaaatcaaaattcttcgatagcaaatttggtacagccttctta
acgcaaaattcctcagtaattttacggcctcaagaattgtcgaacattaaaaatgaggaa
gagctctctaaagtaaatcgtcataataaaaagctccgttcttggttaaagaaacgcagt
agtgcggcaaaggctcacgcgaagcacatttccccatttacggaattctctgcagaactt
cggaacgaaatcgaagtggaaaatcccaatgaaataaatgaaaatactggcagacgtcgt
atagatgaagccatagtcaagttgtggcacaaggctgacgatgagagtaaaaaactgtat
caaaagaaatatgcccgttgtccggatcccacaaactctgtttatggccaagacacaacg
tttgggtctgtatcggaaaaaattgaaaaaatcgtagccgactacattgaaaaacatcca
aatcgaaaagatgccgtcaccgatgtcatgtatgttaaaaatgttaaagctcttgcagcg
ccaggtgaacctgttggtctgctggcagcgcaatccatcggtgaaccatctactcagatg
acgctaaacacttttcactttgccggtcgtggtgaaatgaacgtgactctgggtattcca
cgtctgcgagaaattcttatgatggcttcggccaatattaaaaccccatccatggacata
cctatcaaagccaatcaagcgaaggccgctgaaaaattgagaatctctttgaatcgcgtc
actcttgctgatgttttgcaatatgtgaatgttaaaacacaatttgtgcaacaacctacc
agaacacaaaaatatgaattgactttccaatttctgccacgtgaagcctattgtgatgac
ttttgtgtgaaacccaagcaaatacttagatttatgagcagcaaatttttcggtgttctt
ttccgcgccatcattaagtctaacaagtcaaaagcagtagtcatcgaaatgggcgaaacg
caaaaggacgattcaaacaacgatgaaaaattagatgccgatgatggtgaaaacggttca
agtgaaaataataaaaaatccaagtcaaatgtaacatccaacgacaatgataatgattcg
tcggacgaggaaggggctaacgatgatggagatgatgctactggtataaaattaaaatcg
cgtaaagtagatgaaactgaatacgatgatcccgatgatgctgatgagctaatggatgct
gatgatgatgaagatgcaaatgatgatggcttctttgatactgaagctgtggaggacaac
agcgaagatgtagaaaatgaaaagggcgataagaaaattgagaaaatcctggacaacgcc
ttggtagagagttatgtttacgatgaaaagcattacttgtgggctaaactgacatttaat
cttgatatgaaatacaaacagcctaatatttcatcgatcattaaagagttggttcaaaag
actgtaattcatcaagtggataagatcaagcgtgctatcatttataagggtaaccaggat
gaacagactcttaaaacagatggcataaatattgtggaaatgttcaaacacaatacaatc
cttgatataaatcgtctctattcgaacgacatacatgccattgctcgtacatatggcatt
gaagctgctggccaagtgattgtacaggaagtaacgaatgttttcaaagtgtatggtatt
acagtggatcgacgccacttatcgcttatagctgattacatgacatttgatgggacattc
caaccactgtcccgaaagggcatggagcattcttcctcacctcttcaacagatgtcgttt
gaatcatgtttacagtttttgaaaaatgctgcggccgcaggttacggtgatgaattaaat
tcaccatccagtcgattgatggttggtttgccagttaaaaatggtacaggtgcctttgat
ctgttaacaaaaatatgctaa
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integrated database retrieval system
