KEGG   Crassostrea virginica (eastern oyster): 111103284
Entry
111103284         CDS       T09197                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like isoform X1
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvn04121]
    111103284
Ubiquitin system [BR:cvn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111103284
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Bromodomain EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_SCAP WDR54 Auxin_resp Zap1_zf1
Other DBs
NCBI-GeneID: 111103284
NCBI-ProteinID: XP_022292126
UniProt: A0A8B8ALY4
LinkDB
Position
7:complement(43957620..43975608)
AA seq 1818 aa
MAGHAPGTSTSSSVTEELYFLIARFLTQGPCRGAAEVLQKELKENKLLPKRIDWEGTEHE
RSYENLVDLNRHIKSDHLLKICQRLGPLLDKEVKPSVCGVQSLLGAGSQSLLRTKEGIEN
PVWTPPTHVVTHHQRPLYPPKNLVCPSFGYVIRGREMSGQSRTDHACPNHFYTKINMHAR
KLGHLSAVYCVSFDRTGHYIFTGADDALIKIWKACNGRLLATLRGHNSEITDIAVNYENT
LLASGSCDKTIRVWCLRTKAPIAVLQSHTATVTSLQFCPQSKGEARVLMSTGGDGCVCFW
VWDVTTNTFNPKPHKFIERSRAGAQMLCSSFSPGGVFLATGSADHVIRVYFLHNTKPEKI
SELESHTDRVDSICYCNHGDRFVSGSKDGTARIWRYERQEWRALVLFMNTTLESTNKNDV
EDVKRFRVTMVSWNMDDSLVITAVSDFSIKVWNSHTGNLVHILKAHEDEIFVLEHSPVEA
RIMLSAGHDGNIAIWDLHKGKKIKSFFNMIEGQGHGAVFDCKFSLDGLSYAATDSHGHLL
LFGFGSNEKHKKIPEEVFFHTDYRPLMRDANNYVLDEQTQQPPHLMPPPFLVDIDGNPYP
PRFQKLVPGREQCNNDQLIPQMQVNEEGSQEVMGDLEALVDDHPHQEDPAPVPPVDPFPG
DPPAQEHRPSIDNMIQQLQREQDQRIAREGLESLGSPPPQLGSPRVNRANSVNVGLRRTG
EREGVRQSLGNISQRATQSDIAALSRRVVVQELDAAALARDEDLRTSYANEEAKHFMVER
KKKPFNFDGDYSDAGPRLKSRHKHKNRRENVVTQRENEEVATNRLVTRALYDTEEEEEEE
NAEASSDAIFSSDNDNDDGESSEYSDWVGDTGVSLQPPKRKSKRQVKRRKLSSSEDDEEV
DVLDDDDDDNYDEDSTRDSAKSSGSRRQQPKRKKPPPPTRKKPSKNKRKKEKLVKKMEDI
TELPEEFRPPEWLTDVIPRKSPYVPQMGDNVMYFKQGHELYLQAVKKRNVYKVDTRKHQP
WHSNPNLREQEHMKIVGIKYEVRPPRLCCLKMAYLDPETGKPTKNSFTVKYHDMPDVIDF
IVLKQSYDTAMRRNWNAGDRFRSMIDDAWWFGTIASQSPYEAFYPDSMFQCFMVNWDNGE
TERLSPWDMEPVDQNHLPARNESCVPVQPEELRSLMYTPVEGEWPTCGRDAECNRIAHGM
ESVMQHSIAEQFLTPVDLNVFPIYGIIIEYLIDLTTIKSRLENRFYRRISALQFDIRYIE
QNTVAFNEPGTAIVKSARILTEALLEFIQDTDCTDPMPILNTLCHREKVGGVSSGSDTED
TADSSKHRHSDEDQPGTSTRRKPVPVPVVNKNPDSWKSECLTLLETIFRCEDSNPFRFPV
DPDELPEYFDIIEHPMDLSTVKENLLGDRYPNPNSLFKDLRLIFSNSRTFNTNKRSRIYA
MTLRLSAMVEEKMKEIINGWNSAVKQRKNSPRQAAQSSYINSIASSSRSSRSLPRRMAAT
VASSSIRASSLHNGARPSTLETTATSHSDLNMSATTLEVDDLEDDDDEDYQPVKAKTSSP
RKRPARVPKPVEESNHFDSDTELEDEVEEVDEDKTESEEEEEEEPAVRNIARSSRTRGKR
PLTNGNASNHYTTRASTGSIKVKHFKKSGSYSESNTESQSSENEEAAEARDSSPASSSSS
KSSSSSSGSETELDSKSSDSENSPKTRSKRVAPRLRKEVDSSKGRSHNAQRQKGPGKASN
SGTRQTRNQGKRTVRYEEDSDYEYGENGASSSHRTRKRPRYVSPENSESDSDENSEVMRS
SRGRIRKLTPRARASLRH
NT seq 5457 nt   +upstreamnt  +downstreamnt
atggcaggtcatgctcctggaacatcgacctcgtcatccgttactgaagagctgtatttt
ctcattgcccggtttctgacccagggaccctgccgtggtgctgcagaggttttgcagaaa
gaattgaaggaaaacaagcttttacccaaaagaatcgactgggaaggcacagaacacgaa
agaagttatgaaaatttggtggatctaaatcgccacatcaagtcggatcatctgttgaaa
atatgtcagcgcctaggtcccctgttggacaaagaggtcaagcccagtgtctgtggggta
cagtcactgctgggggcaggcagccagtccctcctcaggaccaaagagggtatagagaat
cctgtgtggacccctcccactcacgtggttacccaccatcaaagacctctgtatccaccc
aaaaacctggtctgtccatcatttgggtatgtgatacgtgggagagagatgtctggacaa
tcccggaccgaccacgcctgtcctaaccacttctacacaaagatcaacatgcacgcccgc
aaattgggacatctgtctgcagtgtattgtgtgtcatttgatagaactggacattacata
ttcactggagcagatgatgcactcatcaaaatctggaaggcctgtaatgggagacttctg
gccactctcaggggacataactcagagatcacagacattgcggtgaactatgagaacact
ctgctggcctcgggaagctgtgacaagaccatccgtgtttggtgtctaagaacaaaggcc
cccatagcagttctacagagtcacacagcaactgttacctcactacagttttgtccccag
agtaagggggaagcccgagtcctaatgtccactgggggagatggctgtgtctgtttctgg
gtgtgggatgtcaccaccaacacattcaatcctaagccacacaagttcattgagaggtcg
cgggctggggcacagatgttgtgctcgtctttcagtcccggaggcgtgtttctggccaca
ggaagtgcagatcatgtgatcagagtttacttcctccacaacacaaaaccagagaaaatc
tcggaactggaatcgcacacagacagagtggacagtatttgttattgtaaccatggcgac
agatttgtcagtgggagtaaggatggaacagccaggatctggcggtatgagcgacaagag
tggcgggcccttgttctcttcatgaacacaacattagagagcactaacaagaacgacgtt
gaagatgtgaagagatttcgagtgacgatggtgtcatggaatatggatgactcgctggtg
ataacggctgtcagtgatttctccatcaaagtgtggaactctcacacggggaatctggtc
cacatcctcaaggctcatgaggatgagatctttgtgctggaacacagtcccgtggaagcc
cgcatcatgctgagtgctggacatgacggaaacattgccatctgggatctccataaaggc
aaaaaaatcaagtctttcttcaacatgattgaaggtcagggccacggtgcggtgtttgac
tgtaagttttctttggatggactgagttacgccgccacggactcgcacggtcacctgcta
ctgtttggcttcggctccaacgagaaacacaaaaaaattccagaggaggtgtttttccac
acggactaccgaccactgatgcgtgacgcaaacaactatgttctggatgagcagacacaa
cagcctccccacctcatgcccccacccttcttggtggacattgatgggaatccctacccc
ccacgctttcagaagttagtgcctggcagggagcagtgtaataacgaccagctgattcct
caaatgcaggtcaatgaggaaggctcacaagaggttatgggagacctggaagctctggtg
gatgaccacccccaccaagaggatccagcccctgtccctccggtggaccccttccccggg
gacccgcctgcccaggagcaccggcccagcatagacaacatgatccagcagctacagcgg
gaacaggaccagaggatagccagggagggactggagtccctggggagccccccaccacag
ttaggctctccaagggtcaatagggcaaattcagttaacgtggggctgaggaggacggga
gagagggagggggtgcgccaatccctgggcaacatctcccagagggccacacagtcagat
attgctgctctcagtcgccgcgtggttgtacaggaacttgacgcggctgctctagcgagg
gacgaagacttgaggacgtcttatgctaacgaggaggccaagcatttcatggtagagaga
aaaaagaaacctttcaacttcgatggggactacagtgacgctggaccgcgattgaaatct
aggcacaagcacaaaaacaggcgagaaaacgttgtaactcagagagagaatgaagaggta
gcaacaaatcggcttgtgacgcgagccttgtatgacaccgaggaagaggaggaggaagaa
aatgctgaagcctcctctgatgctatatttagcagtgacaatgataatgatgatggggag
tccagtgaatactcagactgggtgggagatacgggggtcagtcttcaaccccctaaacga
aagtccaagcgccaggtcaaacggcggaaactctcctcgtctgaagacgatgaagaagta
gatgtgttagatgatgatgatgatgataattatgatgaagacagcacccgagactcggcg
aagagttccggtagtcgtcgccaacagccaaagcgaaagaaacctccccctccgacccgc
aaaaagccctccaaaaacaaacgaaaaaaagaaaaactggtaaagaagatggaagacatc
acagaattgccggaggagttccgtccccctgaatggctgaccgacgtcatcccccggaaa
tccccatatgtgcctcagatgggagataatgtcatgtacttcaaacaaggtcatgaactt
taccttcaagcggtgaagaaacggaatgtttataaggtggacacccgaaaacaccaaccc
tggcactccaatccaaacctcagggaacaagagcacatgaagattgtgggaattaagtat
gaagtccgtccccctcgtctctgctgtctgaagatggcctacctcgaccctgaaaccggg
aaaccaacaaagaattccttcactgtaaaataccatgacatgccggatgtgatcgacttt
atcgtcctgaagcagtcatatgacacggccatgaggcggaactggaatgctggtgacaga
tttcgttccatgatcgatgatgcttggtggtttggtaccattgccagtcaaagtccgtat
gaagccttttatcctgacagcatgttccagtgcttcatggtcaactgggacaatggagag
accgagagactgagcccctgggacatggagcctgtggatcaaaaccatctcccagctcga
aatgagtcatgtgttccagtccagccggaagagttacggtccctgatgtacacccctgta
gagggcgagtggccgacgtgcggtcgggatgctgagtgtaaccgtatcgcacacggaatg
gagagcgtcatgcagcattccatcgctgagcagttcctgacccctgttgacctcaatgtg
ttccccatttacggcattattatagaatacctcatagatctcacgaccatcaaatcccga
ctggagaatcgcttctacaggagaatcagtgccctgcagtttgacattaggtacatagag
caaaatacggtagcattcaatgagcctggtacagcaatcgtcaaaagtgccaggatcctg
acggaagccctgctggagttcatacaagacacggactgcacagatccaatgcccatcctg
aataccctttgtcatcgagaaaaagtgggaggcgtgtcctcggggagtgatactgaggat
accgcggactccagcaagcatcgacattctgatgaggaccagccaggaaccagcacacgg
agaaaaccagttcccgtccccgtggtcaacaagaacccggattcctggaagtccgaatgt
ctcaccctgctggagacaatattccggtgtgaggattctaatcccttccgattcccggtg
gatcctgatgaacttccagagtactttgacatcattgagcacccaatggatttgtccaca
gtcaaggagaacctgctaggtgacagataccccaaccccaacagtctcttcaaggatctg
cgcctgatcttctccaactcccgcacatttaacaccaacaagcgatcccggatttatgcc
atgaccttgaggttgtcagctatggtggaggaaaaaatgaaggagattataaatggctgg
aattcagctgttaaacagaggaaaaactccccaagacaggcagcacagagcagctacatt
aactccatagctagcagcagcagaagttccagaagcctgccccgccgcatggctgccact
gtggcatcctccagcatccgcgccagttccctccacaacggcgccagaccctccacactg
gaaaccacagcaacctcccactctgacctcaacatgtcggccaccaccctggaggtggat
gatttagaggatgacgatgatgaggattatcagcccgttaaagcaaagacctcctccccc
aggaagagaccagcaagggttccaaagcctgtggaagaaagcaaccattttgactcagac
acagaactggaagatgaagtagaggaggtggatgaagataagacagagagtgaagaggaa
gaggaagaagaacccgctgtacgaaacattgccaggtcaagtagaacaagagggaagagg
cccctgacaaacggcaatgccagcaaccactacaccactcgggcttccacagggtcaatc
aaggtcaaacatttcaaaaagagtggctcgtactccgaatccaacaccgagtcccagtct
agtgaaaacgaagaggcagcagaggctcgggattcatcaccagcatcgtcatcatcgtcc
aaatcatcgtcatcatcatcaggctctgaaacagagttggactctaaatctagtgactcg
gagaacagccccaaaactcgcagcaagcgagtcgctccgcggctacgaaaagaggtagac
tcgagcaagggccgatctcataatgctcaaagacagaaggggccaggtaaagcaagcaac
tcagggacaagacagaccagaaatcagggaaaacgaaccgtccgatacgaagaggacagt
gactatgaatatggtgagaatggtgcttcctcgtctcacaggactagaaaaagacctcgc
tatgtctccccagaaaacagtgagtcagactcggatgagaactcggaggtcatgagaagc
agtcgagggcgaatacgaaaactcacacctcgagcgcgagccagtctccgacattaa

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