KEGG   Crassostrea virginica (eastern oyster): 111115225
Entry
111115225         CDS       T09197                                 
Name
(RefSeq) integrin alpha pat-2-like
  KO
K06483  integrin alpha 4
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn04512  ECM-receptor interaction
cvn04517  IgSF CAM signaling
cvn04518  Integrin signaling
cvn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111115225
   04517 IgSF CAM signaling
    111115225
   04518 Integrin signaling
    111115225
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111115225
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvn04147]
    111115225
   04515 Cell adhesion molecules [BR:cvn04515]
    111115225
   04090 CD molecules [BR:cvn04090]
    111115225
Exosome [BR:cvn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111115225
  Exosomal proteins of other cancer cells
   111115225
Cell adhesion molecules [BR:cvn04515]
 Integrins
  Integrin alpha subunits
   111115225
CD molecules [BR:cvn04090]
 Proteins
  111115225
SSDB
Motif
Pfam: FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP_3 FG-GAP_2 PliI
Other DBs
NCBI-GeneID: 111115225
NCBI-ProteinID: XP_022309592
UniProt: A0A8B8C1Q9
LinkDB
Position
9:67334512..67352816
AA seq 1104 aa
MYPRCCGMVWTVAELLTTVVVVALLVVVSGYNVDTDFPKIFKGPAGSWFGVSTEIVKTDS
NTWILVGAPRDNFTDKPEIPQPGNVYACPVNFDEDEQCSVLYKLRTDESSALDADKPPGV
FEQKEQLLGASILVPKDPSKAIIICAPNWRNLRLFSDPSIEAYQVVGNCFELHDRNDLNQ
TTRKPFRISQSMISDGYRDPLIGFSLTESPHPDFDIVFGSPNAGVASTGGTLARNSIGST
HSFIIEKTDLTTTYQAGAYFGYSLATGSFGGDGGFYYVTGSPGFSNQNGVIGSFSIIAFD
GNSENQVKLMEGLQIGAGFGQALVIADVNGDGHQDILVSAPNTYRNETNRNRVIYDVGAI
HIFYGTGDKSTLLTQDAQTITGSTSLGSRFGTAISVVGDLNKDSYNDVVVGAPYEQDSGV
VYIFNGNSPRMEDAFSQRILGSDLRTGLAGFGYYISKTGDDLDGNSYHDFAVGAYKSDEV
VLLRARPIIEVRVSIEMDPDPVPINSTGTACGGQGTTKPCFNLHLCFNFVGEGVNQTYID
IKLFADAENGRPRVSFDDSEQKDVARISRFPVFSYKQSCMNRTLRNLVVNRQFFEDIEKP
VVVRTTYKLSTDSVPDTVRTILKRGSKTVHNSQILFGTGCKDMVCYSNLHLVSMMDKTAF
LIGRDKDLRLNIEFKNSGELSFNTGLQVTFPNIFTYSSLTEEQFSERVICSSVSTSVNDS
VLSCDLDSPLYAYMVVNITMYFYLANDRRINTENIPSSDLTFTSSVSSNHETDSSDNQET
LILPLALLTDVSFIVSSSDEQILATNTSVSFTNTFTMFNEGPSSIDAALVFFLFPVQYEE
NVMIDQDSSKPTTTNDKDKCRLLYHPDRNKAPEGERLSSNSMNREFIQRPLSERPETSQT
MACDSVGNGYKCAVVECSVYDVQPTDTDNRTFTLVFHLQTESLPPLQTGKASLSFVVQAS
VYPSPDTRIPLQFERNVTSEISVNILLSEFITLPAEEVSVWIIIVACLVSILLIVIVVIV
LWKCGFFERKKRKELNAFKRKTQMSIRSARSARSGVGAGSVKSHRSITTGSFRVKKMGDD
HEKLHDKNDAEEDENISPEENNKC
NT seq 3315 nt   +upstreamnt  +downstreamnt
atgtaccctcgatgttgtgggatggtttggactgtggccgagttgttgacaactgttgtt
gttgttgctctccttgttgttgtttctggatataatgtagacaccgactttcctaaaatc
ttcaaaggtcccgcgggttcttggtttggggtgtcaacagaaattgtcaaaacggattca
aatacttggatcttggtcggagctccacgcgacaactttactgataaaccggaaattcct
caaccaggaaatgtatacgcatgcccagttaattttgatgaagatgagcaatgttctgtc
ctctataagcttcgaacagatgaatcttcggcacttgatgcagataaacctccgggggtg
ttcgaacaaaaagaacaacttttgggcgcatctatacttgttcctaaggatcctagcaaa
gctatcataatatgtgccccgaactggcggaatttgcggttgttttcagacccttcgatt
gaagcttaccaagttgttggtaattgctttgaactccatgatcgaaatgaccttaaccaa
acaacacggaaaccgttccgcatcagtcaaagtatgatcagtgacggatacagagatccc
cttataggattctccctgacggaatcaccgcatccagatttcgacatagtgtttggttcc
ccaaacgcaggtgtggcttctacagggggtacactagcaaggaatagtataggatcgaca
cattcttttatcattgagaagactgacctgaccacaacctaccaagcaggagcatatttc
ggttacagtctcgccacagggagttttgggggtgatggtgggttttactacgtgactgga
tccccaggttttagtaatcaaaatggcgtcattggttcgttttcaatcattgcatttgat
ggcaattctgagaatcaagtgaaattaatggaaggactacagataggcgcggggtttgga
caagccctggttatcgccgacgtcaatggtgatggccaccaagatatcctggtctcggca
ccaaacacttaccggaacgaaaccaacagaaacagggttatctatgacgttggagcaata
catatattttatggaactggagacaaatcgaccctacttactcaagatgcacagactatc
actggatccaccagccttggatcccgctttgggacggccatttctgtcgtgggggacttg
aacaaagacagttacaacgatgttgtagttggggcaccgtatgaacaggactcgggtgta
gtgtacatattcaatgggaatagccctagaatggaggacgccttctctcagaggattctg
ggatcggacctacggacaggactggcggggttcggttattacatatccaaaactggagat
gaccttgatggaaacagttaccatgactttgctgtgggtgcgtacaagtctgacgaggtg
gtattactgagggcgcggcctataatagaggtccgtgtatccatcgagatggaccctgac
ccagtgccgatcaactccacgggaacggcgtgtgggggtcagggaacaaccaaaccctgc
ttcaatctccatctatgttttaactttgtcggagagggcgtcaatcagacatacattgat
ataaaactatttgcggatgcggagaatggacgaccgcgcgtgtcgtttgatgattccgag
cagaaggacgtggcgcggatctcacgattcccggtcttttcctacaaacagagctgcatg
aatcgaactctccggaatcttgtcgttaatcgacaattctttgaggacattgagaagcct
gtagtcgtacggactacatacaaactgagcacagactctgtaccggatactgtcagaacc
atcctaaaacgaggctctaaaaccgttcacaacagtcagattttgtttggaactggctgc
aaggatatggtttgttattcaaatctgcatctcgtctcaatgatggataagacggcattt
ttgattggtcgagacaaagaccttcggttaaacattgagttcaaaaactcgggagaactc
tcatttaatactggattacaagtaacgtttccaaacatcttcacttactctagtcttaca
gaagaacaattttcggagagagttatctgttcttccgtgtccacttccgtcaatgattct
gtcttgtcctgtgatctggacagtcccttgtatgcttacatggttgtgaacatcactatg
tacttctatttagccaacgataggagaatcaatacggaaaacattccctcctccgatctt
acttttaccagctctgtttccagcaatcacgagacagacagcagtgacaaccaagaaacg
ttgattcttcctcttgctttgctaacagatgtgtcctttattgtatcctcttcagatgaa
cagatcttggccaccaataccagtgtctcgttcaccaatacctttaccatgttcaacgaa
gggccttcttcaattgatgctgccctggtctttttcttattccctgtacagtatgaagaa
aacgtgatgatagaccaagacagttcaaaaccaaccacgacaaatgataaggacaaatgc
agactgttgtatcatcctgaccgaaacaaagcgcctgaaggagaacgtttgtcctcaaat
tcaatgaatagagaatttatacagcgtccattatcagaaaggcctgaaacatcacagaca
atggcctgtgattctgtcggtaatggctataaatgtgctgttgtggagtgctccgtatat
gatgttcagccgacagacactgacaataggacctttaccctggttttccaccttcagacc
gagtcactaccgccactgcaaacgggcaaggcctctctgtcgtttgtggtacaggccagt
gtgtatccttcccccgacaccaggatccctcttcagttcgagagaaacgtcactagcgag
atatctgtcaatatcctgctgtcggagttcatcactctgccggcagaggaagttagtgtg
tggatcatcatcgtcgcctgtctcgtcagcattctcctcatcgtcatcgtcgtcatcgtc
ctatggaagtgtgggttcttcgagagaaagaagcggaaggaactgaatgcatttaaaaga
aaaactcagatgtccatacgcagcgctcgtagtgcacgcagtggtgtcggcgcaggctca
gtgaagagtcaccgaagtattactaccgggtcattcagggtcaagaagatgggcgacgac
cacgaaaaactccacgataaaaatgatgcggaggaagatgagaatatatcaccagaagag
aataataaatgttga

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