Crassostrea virginica (eastern oyster): 111115225
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Entry
111115225 CDS
T09197
Name
(RefSeq) integrin alpha pat-2-like
KO
K06483
integrin alpha 4
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04512
ECM-receptor interaction
cvn04517
IgSF CAM signaling
cvn04518
Integrin signaling
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111115225
04517 IgSF CAM signaling
111115225
04518 Integrin signaling
111115225
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111115225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111115225
04515 Cell adhesion molecules [BR:
cvn04515
]
111115225
04090 CD molecules [BR:
cvn04090
]
111115225
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111115225
Exosomal proteins of other cancer cells
111115225
Cell adhesion molecules [BR:
cvn04515
]
Integrins
Integrin alpha subunits
111115225
CD molecules [BR:
cvn04090
]
Proteins
111115225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
FG-GAP_2
PliI
Motif
Other DBs
NCBI-GeneID:
111115225
NCBI-ProteinID:
XP_022309592
UniProt:
A0A8B8C1Q9
LinkDB
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Position
9:67334512..67352816
Genome browser
AA seq
1104 aa
AA seq
DB search
MYPRCCGMVWTVAELLTTVVVVALLVVVSGYNVDTDFPKIFKGPAGSWFGVSTEIVKTDS
NTWILVGAPRDNFTDKPEIPQPGNVYACPVNFDEDEQCSVLYKLRTDESSALDADKPPGV
FEQKEQLLGASILVPKDPSKAIIICAPNWRNLRLFSDPSIEAYQVVGNCFELHDRNDLNQ
TTRKPFRISQSMISDGYRDPLIGFSLTESPHPDFDIVFGSPNAGVASTGGTLARNSIGST
HSFIIEKTDLTTTYQAGAYFGYSLATGSFGGDGGFYYVTGSPGFSNQNGVIGSFSIIAFD
GNSENQVKLMEGLQIGAGFGQALVIADVNGDGHQDILVSAPNTYRNETNRNRVIYDVGAI
HIFYGTGDKSTLLTQDAQTITGSTSLGSRFGTAISVVGDLNKDSYNDVVVGAPYEQDSGV
VYIFNGNSPRMEDAFSQRILGSDLRTGLAGFGYYISKTGDDLDGNSYHDFAVGAYKSDEV
VLLRARPIIEVRVSIEMDPDPVPINSTGTACGGQGTTKPCFNLHLCFNFVGEGVNQTYID
IKLFADAENGRPRVSFDDSEQKDVARISRFPVFSYKQSCMNRTLRNLVVNRQFFEDIEKP
VVVRTTYKLSTDSVPDTVRTILKRGSKTVHNSQILFGTGCKDMVCYSNLHLVSMMDKTAF
LIGRDKDLRLNIEFKNSGELSFNTGLQVTFPNIFTYSSLTEEQFSERVICSSVSTSVNDS
VLSCDLDSPLYAYMVVNITMYFYLANDRRINTENIPSSDLTFTSSVSSNHETDSSDNQET
LILPLALLTDVSFIVSSSDEQILATNTSVSFTNTFTMFNEGPSSIDAALVFFLFPVQYEE
NVMIDQDSSKPTTTNDKDKCRLLYHPDRNKAPEGERLSSNSMNREFIQRPLSERPETSQT
MACDSVGNGYKCAVVECSVYDVQPTDTDNRTFTLVFHLQTESLPPLQTGKASLSFVVQAS
VYPSPDTRIPLQFERNVTSEISVNILLSEFITLPAEEVSVWIIIVACLVSILLIVIVVIV
LWKCGFFERKKRKELNAFKRKTQMSIRSARSARSGVGAGSVKSHRSITTGSFRVKKMGDD
HEKLHDKNDAEEDENISPEENNKC
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtaccctcgatgttgtgggatggtttggactgtggccgagttgttgacaactgttgtt
gttgttgctctccttgttgttgtttctggatataatgtagacaccgactttcctaaaatc
ttcaaaggtcccgcgggttcttggtttggggtgtcaacagaaattgtcaaaacggattca
aatacttggatcttggtcggagctccacgcgacaactttactgataaaccggaaattcct
caaccaggaaatgtatacgcatgcccagttaattttgatgaagatgagcaatgttctgtc
ctctataagcttcgaacagatgaatcttcggcacttgatgcagataaacctccgggggtg
ttcgaacaaaaagaacaacttttgggcgcatctatacttgttcctaaggatcctagcaaa
gctatcataatatgtgccccgaactggcggaatttgcggttgttttcagacccttcgatt
gaagcttaccaagttgttggtaattgctttgaactccatgatcgaaatgaccttaaccaa
acaacacggaaaccgttccgcatcagtcaaagtatgatcagtgacggatacagagatccc
cttataggattctccctgacggaatcaccgcatccagatttcgacatagtgtttggttcc
ccaaacgcaggtgtggcttctacagggggtacactagcaaggaatagtataggatcgaca
cattcttttatcattgagaagactgacctgaccacaacctaccaagcaggagcatatttc
ggttacagtctcgccacagggagttttgggggtgatggtgggttttactacgtgactgga
tccccaggttttagtaatcaaaatggcgtcattggttcgttttcaatcattgcatttgat
ggcaattctgagaatcaagtgaaattaatggaaggactacagataggcgcggggtttgga
caagccctggttatcgccgacgtcaatggtgatggccaccaagatatcctggtctcggca
ccaaacacttaccggaacgaaaccaacagaaacagggttatctatgacgttggagcaata
catatattttatggaactggagacaaatcgaccctacttactcaagatgcacagactatc
actggatccaccagccttggatcccgctttgggacggccatttctgtcgtgggggacttg
aacaaagacagttacaacgatgttgtagttggggcaccgtatgaacaggactcgggtgta
gtgtacatattcaatgggaatagccctagaatggaggacgccttctctcagaggattctg
ggatcggacctacggacaggactggcggggttcggttattacatatccaaaactggagat
gaccttgatggaaacagttaccatgactttgctgtgggtgcgtacaagtctgacgaggtg
gtattactgagggcgcggcctataatagaggtccgtgtatccatcgagatggaccctgac
ccagtgccgatcaactccacgggaacggcgtgtgggggtcagggaacaaccaaaccctgc
ttcaatctccatctatgttttaactttgtcggagagggcgtcaatcagacatacattgat
ataaaactatttgcggatgcggagaatggacgaccgcgcgtgtcgtttgatgattccgag
cagaaggacgtggcgcggatctcacgattcccggtcttttcctacaaacagagctgcatg
aatcgaactctccggaatcttgtcgttaatcgacaattctttgaggacattgagaagcct
gtagtcgtacggactacatacaaactgagcacagactctgtaccggatactgtcagaacc
atcctaaaacgaggctctaaaaccgttcacaacagtcagattttgtttggaactggctgc
aaggatatggtttgttattcaaatctgcatctcgtctcaatgatggataagacggcattt
ttgattggtcgagacaaagaccttcggttaaacattgagttcaaaaactcgggagaactc
tcatttaatactggattacaagtaacgtttccaaacatcttcacttactctagtcttaca
gaagaacaattttcggagagagttatctgttcttccgtgtccacttccgtcaatgattct
gtcttgtcctgtgatctggacagtcccttgtatgcttacatggttgtgaacatcactatg
tacttctatttagccaacgataggagaatcaatacggaaaacattccctcctccgatctt
acttttaccagctctgtttccagcaatcacgagacagacagcagtgacaaccaagaaacg
ttgattcttcctcttgctttgctaacagatgtgtcctttattgtatcctcttcagatgaa
cagatcttggccaccaataccagtgtctcgttcaccaatacctttaccatgttcaacgaa
gggccttcttcaattgatgctgccctggtctttttcttattccctgtacagtatgaagaa
aacgtgatgatagaccaagacagttcaaaaccaaccacgacaaatgataaggacaaatgc
agactgttgtatcatcctgaccgaaacaaagcgcctgaaggagaacgtttgtcctcaaat
tcaatgaatagagaatttatacagcgtccattatcagaaaggcctgaaacatcacagaca
atggcctgtgattctgtcggtaatggctataaatgtgctgttgtggagtgctccgtatat
gatgttcagccgacagacactgacaataggacctttaccctggttttccaccttcagacc
gagtcactaccgccactgcaaacgggcaaggcctctctgtcgtttgtggtacaggccagt
gtgtatccttcccccgacaccaggatccctcttcagttcgagagaaacgtcactagcgag
atatctgtcaatatcctgctgtcggagttcatcactctgccggcagaggaagttagtgtg
tggatcatcatcgtcgcctgtctcgtcagcattctcctcatcgtcatcgtcgtcatcgtc
ctatggaagtgtgggttcttcgagagaaagaagcggaaggaactgaatgcatttaaaaga
aaaactcagatgtccatacgcagcgctcgtagtgcacgcagtggtgtcggcgcaggctca
gtgaagagtcaccgaagtattactaccgggtcattcagggtcaagaagatgggcgacgac
cacgaaaaactccacgataaaaatgatgcggaggaagatgagaatatatcaccagaagag
aataataaatgttga
DBGET
integrated database retrieval system