Crassostrea virginica (eastern oyster): 111126783
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Entry
111126783 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: glycine receptor subunit alpha-4-like
KO
K05194
glycine receptor alpha-2
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111126783
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111126783
Ion channels [BR:
cvn04040
]
Ligand-gated channels
Glycine
111126783
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
111126783
NCBI-ProteinID:
XP_022327351
UniProt:
A0A8B8DK27
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Position
3:28820015..28832069
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AA seq
404 aa
AA seq
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MTRMGVTRNRFRNLVFLWLLPVVTTSNSSKRHEFFDVMFNEEYDPRIPPIHKGEPVLNTI
QLYILGIDSISDSTMDFKMSFFLRQRWYDYRLAYAGRFNFSKVELDTRVMNSVWIPDLYV
KNEKKSEIHAVTVPNKLMHLYPDGQVVYSMRVTGTYSCQMYLQKYPLDQQTCSIQMESYG
YSTETLKFQWNDVPLMTQPNLTLPQFDIGHVTDHTCDITYNNGNSTVTFTCLGIDIEMSR
NYGYYIIQVYVPSFLIVCLSWVSFWLNVDAVPARISLGLLTVLTMTTQSSGARATLPRVS
YIKAIDVWMATCLLFVFAALIEFSVVNVKXRVQQRRSASLKELPLLLHNKAEANNDKPLM
ERTSRMEARRVDKLSRVLFPSVFFCFNLIYWTVYILWTPDDQEH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaatgggggtcacgaggaacaggtttaggaatcttgtctttctatggttactt
ccggtcgtgacaaccagtaactccagcaagcggcacgagttttttgatgtgatgttcaat
gaagagtatgatcccaggattcctccaatccacaagggtgagccagttctgaatacgata
cagttatacattctgggaattgactcgatcagtgacagtaccatggatttcaagatgagt
tttttccttcgtcaaagatggtacgactacaggctggcttatgcaggtcggtttaatttt
tcaaaagttgagctggatacgagagttatgaacagtgtatggattcccgacctttatgtc
aagaacgagaagaaatccgagattcatgcggtgacggtccccaacaagctaatgcacctg
tatcctgacggccaggtggtttatagcatgagggtaacgggaacatattcctgccagatg
tacctgcagaagtaccctctagaccaacagacctgttccatacagatggagagttacgga
tatagtacagagactctgaaatttcaatggaatgacgtccctttgatgacgcaaccaaac
ctcaccttgccgcagttcgatataggacacgttaccgatcatacctgcgacattacatac
aataacggtaattctaccgttacgtttacttgtttgggcatcgacattgaaatgagtcgt
aattacggatactacatcatccaagtatacgttccgagtttcctcatcgtctgtttgtct
tgggtctcattttggttaaatgtggatgcagtgccagcccgaatttccctgggtttgttg
acagttctcaccatgacgacccaaagttccggggcacgtgccacccttcctcgtgtgtcg
tatattaaagccatagatgtatggatggcaacgtgtcttctgtttgtgttcgcagcactg
attgaattttctgtagtcaatgtgaaantcagagtccagcaacgtcgatcagcatctctt
aaagaattgcctctactcttacacaataaggcagaggctaataacgacaagcctctaatg
gaacgaacaagccgcatggaagccaggcgtgtcgacaaactgtccagagttctctttcct
tctgtgttcttctgtttcaatctcatatattggactgtctacattttgtggaccccggat
gaccaagaacattaa
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