Crassostrea virginica (eastern oyster): 111128115
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Entry
111128115 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-C-like
KO
K08770
ubiquitin C
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04120
Ubiquitin mediated proteolysis
cvn04137
Mitophagy - animal
cvn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111128115
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111128115
04137 Mitophagy - animal
111128115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111128115
Ubiquitin system [BR:
cvn04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
111128115
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GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
111128115
NCBI-ProteinID:
XP_022329279
UniProt:
A0A8B8DNY1
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Position
4:complement(30058225..30060912)
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AA seq
609 aa
AA seq
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MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDXIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGN
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgtgaaaaccctcactggcaagaccatcacacttgaggtggagccatca
gataccattgaaaatgtcaaggccaagatccaggacaaagaaggaatccctccagatcag
cagagattgatctttgccggaaaacagctggaagatggccgcaccctctccgactacaac
attcagaaggaatccaccctccatttggtgttgcgtcttcgtggaggaatgcaaatcttt
gttaaaaccctcaccggcaagaccatcacactggaagtagagccctcagacaccattgaa
aatgtcaaggccaagatccaggacaaagaaggaatccccccagatcagcagagattgatc
tttgccggaaaacagctggaagatggccgcacactctccgattacaacattcagaaggaa
tccaccctccatttggtgttgcgtcttcgtggaggaatgcaaatctttgttaaaaccctc
accggcaagaccatcacactggaagtagagccctcagacaccattgaaaatgtcaaggcc
aagatccaggacaaagaaggaatccccccagatcagcagagattgatctttgccggaaaa
cagctggaagatggccgcacactctccgattacaacattcagaaggagtccaccctccat
ttggtgttgcgccttcgtggaggaatgcaaatctttgtcaaaaccctcactggtaagacc
atcacactggaagtagaaccctcagacactattgaaaatgtcaaagccaagatccaggac
aaagaaggaatccccccagatcagcagagattgatctttgccggaaaacagctggaagac
ggccgcaccctctccgactacaacattcagaaggaatccaccctccatttagtgttgcgt
cttcgtggaggaatgcaaatctttgttaaaaccctcaccggcaagaccatcacactggaa
gtagagccctcagacaccattgaaaatgtcaaggccaagatccaggacaaagaaggaatc
cccccagatcagcagagattgatctttgccggaaaacagctggaagatggccgcacactc
tccgactacaacattcagaaggaatccaccctccatttggtgttgcgtcttcgtggagga
atgcaaatttttgtcaaaaccctcaccggcaagaccatcacactggaagtggaaccctca
gacnacattgaaaatgtcaaggccaagatccaggacaaagaaggaatccccccagatcag
cagagattgatctttgccggaaaacagctggaagatggccgcacactctccgactacaac
attcagaaggagtccaccctccatttggtgttgcgccttcgtggaggaatgcaaatcttt
gtcaaaaccctcaccggcaagaccatcacactggaagtagaaccctcagacactattgaa
aatgtcaaggccaagatccaggacaaagaaggaatccccccagatcagcagagattgatc
tttgccggaaaacagctggaagatggccgcaccctctccgactacaacattcagaaggaa
tccaccctccatttagtgttgcgtcttcgtggaggaatgcaaatctttgttaaaaccctc
accggcaagaccatcacactggaagtagagccctcagacaccattgaaaatgtcaaggcc
aagatccaggacaaagaaggaatccccccagatcagcagagattgatctttgccggaaaa
cagctggaagatggccgcacactctccgactacaacattcagaaggagtccaccctccat
ttggtgttgcgtcttcgtggaggaaattaa
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