Crassostrea virginica (eastern oyster): 111130297
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Entry
111130297 CDS
T09197
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111130297
Membrane trafficking [BR:
cvn04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111130297
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
PH_13
Ank_2
C1_2
HypA
Motif
Other DBs
NCBI-GeneID:
111130297
NCBI-ProteinID:
XP_022332859
UniProt:
A0A8B8DZE5
LinkDB
All DBs
Position
4:35084824..35142443
Genome browser
AA seq
2008 aa
AA seq
DB search
MAFDKNSSPVYGGGKIRVNLPPGVPLNCPLYLVFEGPYQRHITTGIRSGDTCWAMIPAHG
EAEKVQVTLFSYYNNDICALVTSSFVFDHDPTYFLACFLVESVYNVASLENEELIRSDKF
DLGEEDLETLDQRLYLALRYLEIPEWWHLLGSNSPAVSADPIPRETLLHFVARLGLFKVA
LFLLDKNGAQEALCLPNRHGYLPKDIAVEKGHTKLATILTEYNSHSVQLYTEPLATDFGI
ICQLENGQKSMSTITRRPVEEDIYIYHEMISQEGASDDLDLVQRQCQAEWPTTGADNEGE
NISMYDGETETENKIQAILEKTRSLQDAIKNVNTDDLNSSLDDLESPGHSAEDISDVMSD
KDGNPGDVMERDVYEKTLTAVQGFNEDLFKVRDFHRNKLQTQDLLARHSNSCPSLENEGR
FSPLPVVQQSERRNSMLNLAKDDAEPCDSHSPVQLPPDSSDASNVQPSTVQCNIKIYVNG
KTVERGDSQEEHLDSSLNNFLKDYYGGNTPGVRRRSWGPNLMTQNAIGNRINKNTNPVLT
GKSCSLNSLDDDDDDDSDNEMSNDDTEDKTPTSPTGSYDQVVPPVDMEGIVIIPPTSSHS
HNQKVNEAFVSNSGQTLTKTLHSMKKELTSPRQTMKSLSQDGETTMSGQSGDSTDEDAPL
NLNVPHSTMTKSLSTPSIPAAVSPTEKKPFQKESKQRTKLFRSNTPSYLLIQKLIAEHDA
QFRRQDEVQEDDDEKTNRLLGRMSSKSRRKSELSLLDFLSESANSTEEPSKIAKKEKEEK
DKKRKSSVFLRFGSSYRTKKHQMEHFLHFVHKEKENKGRHGHHFVAVSFSNSTSCDVCSK
SMANKPALRCENCSINVHENSCKEQSPVCDKNRQAIRRKRRVPQRSQETGSMTNLHIQDK
QLTAGTAYSGLRPTQSFKERSPSSTDVPLRKQVTSSPPGGLSTLSAIPDCEPDELQGDRQ
HAALHRRSLPNASYSVSPQYQRPGYHHWRRAREKLRGIDKAIHEETEQERLAPGQESSPI
GLSSANSNSLESLDDVDGALEVTSHIDEELRNLSTVEPETWSETLEKKRKKHFNSQEIKR
QDTIWELIQTERHHCRTLKILQRVYAQGILHDLHMSQAIVDRLFPKLDDLIEVHMNFLRN
LHELQSHHPDRSVDKIGDTLVTQFSGESAEKMKCAYGSFCCGHKESVTFYKDLLIKDRKF
HNFVKKCNNDSLLQKREIPDFVLLVTQRPSKYLGLLDTLIKRTTAKDERQNISRSLQLSK
AILQSIDDRVHEQERIQRLREIYEGFDPRANTTYKGKKFKKSDLSQRKLVKEGTIGLKSA
RGKVSEATMVMLTDLIFFMQEQNGKYTFFSQDNKSCAIPLFELLVREKSDTKESKGIYLI
SQNKDNPEMYEIVCNTNSEREAWIREIRAASEKCPAGEEYQPQESDEEERRQMQERSDKI
REIIELLHRKDDEIKSACDQKNELFIKLLEIYNMRDLSRRPDSMGSDEGTEHMDAIQAAI
HQATLTASNLTTMLEGGGSGSIPLMRHVSSVGEHVSSTFQVMPIAKRAETFAGFDTTYDI
SKGDTDKKRFGHVMEGEGHQPDSDSETSYDQQSYQDSYDSSSCHFDNQSMTGSVIEVYQG
QVQLAGDHMTAMRQLSTSLNNIVHLTSKYGTEVESLKAQLAEANERINKLSADVHDKRGV
AYKHHTLEELRNIQEQVQREKAVMAIQRERELTDLSVERTLLEDQRKQFEKDQADLASKK
EELKRQKEAFQKQIDLWQQEKLAHRDSPVEKSVSSPGMVVLRDREGLEGSSSTDPKSYPD
SPNQNSHRRSASADFCSTIEGDLERLRAGHVKTRRELPLRPDQTRGSGIHVTPSFSSSVS
SKLAGNKNQQLPVHLLSAKNEQKKSSSPSQFSQSTGSNKGVQQVLPFKLADAGGAGKPPQ
ANNPVPMSGSQSVSNLYKSNRPQQQKSSSSSSLLGGVLKLAEPGSKGKASTSNGGQKALS
VDSGNAEAKSNAQENSGHQKSGSGIFYM
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgacaagaattcaagccccgtctatggaggcgggaagattcgggttaacctt
cctccgggggtgccccttaactgccccctgtacctcgtattcgaagggccctaccagcga
cacatcacaacagggatcaggagtggcgacacctgctgggcaatgattccagcccatggt
gaagcagagaaagtgcaggtgaccttgttcagttactataacaacgacatctgtgccttg
gtgacctcctcctttgtctttgaccacgacccgacctacttcctggcctgcttcctggtg
gagagcgtctacaacgtggcctcactggagaacgaggaactcattcgctcggacaagttt
gaccttggggaagaggacctggagaccttggaccagaggttgtacctcgccttaagatac
ctggaaatacctgagtggtggcacttactgggttctaattccccagcagtctcagctgac
cccataccgagggaaactttgctgcattttgtggcccgccttggcctgtttaaagtcgct
ctttttctattggacaaaaacggagcacaagaagcactttgtcttccaaatcgccatgga
taccttcctaaagatatagctgtagagaaaggacacaccaagctagctaccattctgact
gaatacaacagtcactcagtccagctttacacagaaccgctagccacagactttggaatt
atatgccagctggaaaatggtcagaagtccatgagcactataactcgcagacctgtcgag
gaagatatctacatttatcatgaaatgatcagccaagagggagccagtgatgaccttgac
ctcgtacagcgccagtgtcaggcagagtggcccaccactggagcagacaatgagggggaa
aacatctcaatgtatgacggggaaacggagacggagaataaaatacaggccattctagag
aaaaccagaagtttgcaggacgccataaaaaatgtcaacaccgatgacctcaatagctcc
ctggatgaccttgaatcgcctggacattcagcagaggatatatccgatgtgatgtcggat
aaagatggaaatccaggagatgtaatggaacgggatgtctatgagaaaactctcactgca
gtacaaggatttaacgaagatttgttcaaagtgcgggattttcatcgtaataagctacaa
acacaggatcttctagccaggcacagtaactcctgtccttccctggaaaacgaaggacga
ttttccccactgcctgtcgttcaacaaagtgagcgacgcaactccatgctaaatttggcc
aaggatgacgcggaaccatgtgattcccattcccctgtacagctcccgccagattctagt
gacgcctcaaatgtccagccttccactgtgcagtgcaatattaagatttatgtgaatggg
aagacagtggaacgaggggacagtcaggaggaacacttagactccagtcttaacaacttc
ctgaaggactactatggaggcaacaccccgggggtgaggcgaagaagctggggccccaat
ctgatgacccagaatgcaataggaaacagaatcaacaagaataccaacccagtcctgact
ggcaaaagttgtagtctgaatagtttagatgatgatgatgatgatgactctgacaatgag
atgtcaaacgatgatacggaggataaaacaccgacatcccccacagggtcgtatgatcaa
gtggtgccccctgtagacatggagggaattgtgatcattccacccacctcctcccactct
cataatcagaaagtcaatgaagcctttgtcagtaactcgggccaaactttgaccaaaaca
cttcacagtatgaagaaagagctaacttctccgcgacagacaatgaaatccctttcacaa
gatggagagacgacgatgtcgggtcagagtggcgactcgacggatgaagacgcgcccctt
aaccttaacgttccacattccaccatgacgaaatctctgtctaccccctccatcccagca
gctgtttcccccacagagaagaaaccatttcaaaaggagtccaagcaacgaactaagctc
ttccgatctaataccccctcatatctactcattcaaaaactcatagcggaacacgacgca
caattccgcagacaagacgaggttcaagaggacgatgacgagaaaacaaatcgattactc
ggacgtatgagcagtaaatcccgtcggaagtctgagttgtctctgctagacttcctctct
gaatcagccaactcgacagaggagccatccaaaatcgccaagaaggagaaagaggagaag
gacaagaaacgaaaaagtagcgtcttcttacgatttggcagcagttaccgcactaaaaag
caccagatggaacactttctccacttcgttcataaagagaaagaaaacaaaggtcgccat
ggacaccatttcgtggcggtcagcttcagtaattctacttcctgtgacgtctgttccaag
tccatggcaaacaaaccagcgctccgatgtgaaaattgttcgatcaatgtccatgagaat
tcctgcaaggagcaaagtcctgtctgtgataaaaaccgccaggccatcaggagaaaaagg
agggtccctcagaggagtcaggagactgggtctatgacaaacctccacattcaggacaaa
cagctgaccgctggcactgcatactcgggcctgcgacccacgcagtccttcaaagagcgg
agtccttcatccacagatgtacctctgcggaaacaggtaacctcctcaccaccagggggc
cttagcaccctctccgctattcctgactgtgaacctgatgaactccagggtgaccgtcaa
catgcagccttacacaggagaagtttgccaaatgcaagttactcagtgtcgccacaatac
cagagaccaggctaccaccactggcgccgcgccagagagaagcttaggggcatcgacaaa
gctattcatgaggaaacagagcaggagcgattggccccaggccaggagtctagtccaatc
gggttatcaagtgctaattccaactcactggaaagcttagatgatgtcgatggtgcccta
gaggtgacatctcacatcgatgaagagctaaggaatctgagtactgtggaaccggagacc
tggagcgagactctggagaaaaagagaaagaaacatttcaattcccaagagataaagcga
caggacacaatatgggagctaatacaaacagaaaggcaccattgccggacactcaaaatt
ctacaaagggtgtatgcccaaggtatccttcacgacctccacatgtcacaagccatcgtg
gaccgactcttccccaaactcgatgacttgatcgaggtccacatgaacttcctgagaaat
ttacatgagttacagagtcaccaccccgaccgatcggtggacaaaatcggggacacactc
gttacccagttttctggagagtctgctgagaagatgaagtgtgcatacggatctttctgc
tgcggccacaaagagtcggtgaccttctacaaagacctcctcatcaaggacagaaagttc
cacaactttgtcaagaagtgcaataatgacagtttactacaaaagagagagatcccagat
tttgtccttctagtcactcagaggccctccaagtacctcggtcttctggacaccttaatc
aaacgaaccacagccaaagatgagcgacagaacatcagtcgttcattacaactcagtaaa
gcaattttacaaagcatagacgaccgagtacacgaacaggaaagaatacagagattacga
gaaatctatgagggctttgatccccgagccaacacaacttacaagggcaaaaagttcaag
aaatctgacctcagtcagaggaagttggtgaaggagggaacgatcggattgaagagtgcg
cggggaaaagtctcagaggccactatggtcatgttgacagatctcatcttcttcatgcag
gaacaaaatgggaaatatacatttttctcacaagataataagtcatgtgcaatacccctg
tttgagttactggttcgggagaagagtgacaccaaggagagtaaggggatctacctaatc
agccagaacaaggacaacccagagatgtacgagattgtgtgtaacaccaacagcgagaga
gaggcgtggatccgggaaatcagagcggcctcggagaaatgtccggcgggtgaggagtac
cagcctcaggagagcgacgaggaggagaggcggcagatgcaggaacgctcagacaagatc
cgggaaatcatagagttgctacacaggaaggatgatgagattaagtctgcatgtgatcag
aagaacgagctatttatcaaactcttagagatctacaatatgagggacctctcaaggcga
ccggactccatgggatcagatgaaggaacagagcacatggatgctattcaggcagctata
caccaagctacactgacagcctccaatctgaccaccatgttggaggggggtgggtcgggg
tccatccccctgatgcgtcacgtcagcagtgtgggggaacacgtcagctccaccttccaa
gtcatgcccatcgccaagcgggccgagaccttcgccggctttgacaccacatatgacata
tctaaaggggacaccgataaaaagaggtttggtcatgtgatggagggtgagggacatcag
ccggacagtgactcggagacctcttatgatcagcagtcttatcaggactcctacgactcc
agcagctgtcattttgacaaccagagcatgaccggctctgtcattgaggtctaccaagga
caagtccaactggccggggatcacatgaccgccatgcggcaattgtccacgtctctcaac
aacattgtgcatctaacatccaagtatggaactgaggtggaatctctgaaagcccagctg
gcggaggcaaacgagaggatcaacaagctgtctgcggacgtccacgataaacggggcgtt
gcctacaagcaccacacactggaagagctgcggaacatccaggaacaggtgcagcgggag
aaggcggtgatggcgatccaacgggaaagggagctaactgatctcagcgtggagaggaca
ctgctggaagaccagcgcaaacagtttgagaaagatcaggcggacctagcttccaagaag
gaagagttaaagagacagaaggaagcctttcaaaaacagattgatctgtggcagcaggaa
aagttagctcaccgggattctcccgtggagaagtcggtcagctccccagggatggttgta
ctgagggacagagaggggctggaggggagcagctccactgaccccaaatcctacccagac
tcccccaatcagaactctcaccggcgctctgctagtgccgatttttgctccaccatcgag
ggagaccttgagagactgcgagctggtcacgtgaaaactcgtcgggaactccccctacgt
ccggaccagacacgtggctcaggaattcatgttacaccaagcttctcctccagtgtgtca
agtaaactggctggaaacaaaaaccagcaactgccagtccatttattgagtgctaaaaat
gaacagaagaagtcctcctccccctcccagttttcccagtccacgggcagcaacaagggg
gttcagcaagtgctgccctttaagctggccgatgctgggggtgccggaaaacccccacag
gccaataatcctgtgccaatgtcgggaagtcaaagtgtgtcaaatctctacaaatctaac
cggcctcagcagcagaagtcctcgtcctcctcctcactcctcggaggagtgctgaagtta
gccgagcccggcagcaagggcaaggccagcaccagcaatggagggcagaaagctctgtct
gtggacagtggcaacgccgaggccaaaagtaatgctcaggaaaacagcggccatcagaag
agtggcagcgggattttctacatgtaa
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integrated database retrieval system
