KEGG   Crassostrea virginica (eastern oyster): 111137183
Entry
111137183         CDS       T09197                                 
Name
(RefSeq) AP-1 complex subunit beta-1-like
  KO
K12392  AP-1 complex subunit beta-1
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn04142  Lysosome
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    111137183
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvn04131]
    111137183
Membrane trafficking [BR:cvn04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    111137183
SSDB
Motif
Pfam: Adaptin_N Cnd1 B2-adapt-app_C HEAT_2 Alpha_adaptinC2 HEAT HEAT_EZ Arm HEAT_GCN1 PDS5 XMAP215_CLASP_TOG UNC45-central HEAT_Maestro Ltn1_1st TOR1L1_N Sec7-like_HUS Alpha_adaptin_C API5
Other DBs
NCBI-GeneID: 111137183
NCBI-ProteinID: XP_022344232
UniProt: A0A8B8EWC9
LinkDB
Position
5:39489154..39496679
AA seq 932 aa
MTDSKYFTTTKKGEVFELKTELQSDKKEKKKEAVKKVIASMTVGKDVSALFPDVLNCIQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVRDCEDSNPLIRALAVRTMGCIRVDKIID
YLCQPLRNCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDQLRDLLSDSNPMVVANA
VAAISEILETSPTAQQVLEMNSSTINKLLTALNECTEWGQVFILDAISNYTPKDDKEAQS
ICERVTPRLAHANAAVVLSAVKVIMKFMEMLEVNSEYISTLVKKLSPPLVTLLSAEPEIQ
YVALRNINLVVQKRPEILKNEMKVFFVKYNDPIYVKLEKLDIMIRLTSQANIAQVLAELK
EYATEVDVDFVRKSVRAIGRCAIKVEPAAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFR
KYPNKYESIIATLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLEGFQDENTQ
VQLQLLTAIVKLFLKRPTDTQDLVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPAAAKE
VVLAEKPLISEETDLIEPTLLDELICNISSLASVYHKPPNAFVEGSKSSLRKILPPRSQS
GNVGEDQPSPPAETPAAPPAATVIPGVDSLIGDLLDMDLGGPSMQQQQMYPPQPTSQTPV
QGGGNMDLLGEGLDSLLGGPAPSGDSLGGLGDIFGMPTAQSYVPPQEVWLPASKGKGLEV
TGTFNRKQGNIIMELTFANKAMQPMTGFAIQFNKNSFGLMPASPINIPTALLPNQSTSYS
LQLSAMGPVQRMDPLSNLQVAIKNNIDVFYFSCLVPMHVLFVEDGEMEKRVFLATWKDIP
AQNEVQHEICNVQHNADTISQKLKNNNVFTIAKRNVEGQDMLYQSLKLTNGIWVLAELKI
QPNNPNFMLSLKARAMDVYQGIQQAFDNILHN
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgacagactcaaaatacttcactaccaccaaaaaaggtgaagtatttgaactgaagaca
gaattgcagagtgataaaaaggagaagaaaaaggaggcagtcaagaaagtaattgccagc
atgactgttggcaaagatgtcagtgctctctttcctgatgtgctgaattgcattcaaaca
gacaacttggaactgaagaagctagtatacctgtatctgatgaattatgccaaaagtcaa
ccagatatggctattatggcagttaatacatttgtcagggattgtgaagattccaatcca
ctcatccgagccttggctgtcaggacaatgggatgtatccgagtggacaagattattgac
tacctgtgtcaaccattgagaaactgcctgaaagatgaggatccttatgtgaggaaaact
gctgctgtgtgtgtagcaaagctacatgatattaacgcccaactggtggaggatcaaggc
ttcctggaccagctccgagacttgttgtccgactccaatccaatggtggttgcgaatgca
gtggctgctatttccgagatcctggaaacctcgcccacagctcaacaggtgctggaaatg
aactccagtactatcaacaaattactgacagctcttaatgagtgcactgagtggggacag
gtctttattttggatgctatttccaactacacaccaaaggatgacaaagaggcccaaagc
atatgtgagagagtaactccaagattggcccatgcaaatgcggctgttgtcctatctgct
gtgaaggtcattatgaagttcatggaaatgttggaggttaactcggagtacatctctaca
ctggtaaagaaattgtccccacctctggtcactctgctgtctgcggagccagaaatccag
tatgtagccctaagaaatatcaatttggtggtgcagaagcggccagagatcctgaagaat
gaaatgaaagttttctttgtgaagtacaatgatccaatctatgtgaagctggagaaattg
gacattatgatccgactgacttcccaggctaacattgcccaggttctcgctgagcttaaa
gagtatgccacagaggtagatgttgattttgtgaggaagtcggtgcgagctattggtcgc
tgtgccatcaaggtggagccagctgccgagcgatgtgttagtactctcttggacctcatt
cagaccaaagtgaactatgttgtgcaggaagcaattgttgtgattaaggacatattcagg
aaatatccaaacaagtatgaaagcatcattgccacgctttgtgagaatctggacactttg
gatgagcctgaagcaagagcttcaatgatctggatcattggtgaatatgcagagagaata
gataatgcagatgaactgctggaaagtttccttgagggatttcaggatgagaatactcag
gtgcagttacagttgttgacagccattgtaaaactatttttgaaacgccccacagacacc
caggatttggttcagcaagttttgagtttggccacgcaggatagtgacaaccctgatctg
agggacagaggctacatttactggcgtctcttgtcaactgacccagcggcagctaaagag
gtggtgctggcagagaagcccctcatatcagaggagactgatctcatcgagcccactctg
cttgacgagttaatttgtaacatctccagtctggcgtctgtctatcataaaccgcccaat
gcttttgtggagggcagtaaatcatctctaagaaaaatcctacccccaagatcacagtca
ggaaatgttggggaggatcaaccctctcccccagcagagactcctgctgcacccccggct
gccacagtcatcccaggggtggactcacttataggggatctcctggacatggatcttggt
ggaccctccatgcagcaacagcaaatgtatccaccacaacccacttcacagacccctgta
cagggaggaggcaacatggatctcctgggtgaaggattagattctctgcttggtggacca
gcccctagtggtgattctttaggcggactgggggatatatttggtatgccaactgcacag
tcatatgtgcctccacaagaagtatggctccctgcatctaaaggtaaaggtctagaagtg
actggaacattcaacagaaaacaaggaaacatcatcatggaattaacatttgccaacaaa
gccatgcagcctatgacaggatttgcaatacagttcaacaaaaatagttttggtttgatg
cctgcctctccaatcaacattcccacagcattactccccaaccagagcaccagctactcc
ttacagctgagtgctatgggaccggtgcaacgcatggaccccctctctaacctacaggtg
gccataaaaaacaatatagatgtattttacttcagttgtcttgttcccatgcatgtgttg
tttgtggaggatggtgaaatggaaaagcgggtatttttagccacatggaaagacattcct
gcccaaaatgaagtgcaacatgagatttgtaatgtccagcataatgcagatactatttca
caaaagttgaagaataacaatgtttttacaattgccaaacgaaatgttgaaggacaagac
atgttatatcagtcacttaaacttaccaatggaatctgggtattggcagaattaaagata
caaccaaataatccaaactttatgctctcccttaaagcaagagcaatggatgtttaccaa
ggaatacaacaggcctttgacaacatcctccacaattaa

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