Chlorella variabilis: CHLNCDRAFT_24970
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Entry
CHLNCDRAFT_24970 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
cvr
Chlorella variabilis
Pathway
cvr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CHLNCDRAFT_24970
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvr01009
]
CHLNCDRAFT_24970
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvr03021
]
CHLNCDRAFT_24970
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_24970
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_24970
Enzymes [BR:
cvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
CHLNCDRAFT_24970
Protein phosphatases and associated proteins [BR:
cvr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
CHLNCDRAFT_24970
Transcription machinery [BR:
cvr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CHLNCDRAFT_24970
Messenger RNA biogenesis [BR:
cvr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CHLNCDRAFT_24970
Spliceosome [BR:
cvr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CHLNCDRAFT_24970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
17353700
NCBI-ProteinID:
XP_005846371
JGI:
ChlNC64A_1_24970
UniProt:
E1ZJ38
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MLDWLLGLGGSPKIRPKHLQDIVEQLLSQQRPGSGEQPFPLNERELKRLCGAAKEVLLKD
PSLVELRTDAQVVVVGDLHGQYQDLQRIFERLGRPGSDPKVWVFLGDYIDGVRRGMRGWP
MGLEIVATLLALKLRHPTQVFMLRGNHECSEITVLFGFCGECQRRSTLAVWEAVMQVFDA
LPLAAQLNGSVFLCHGGISPHLKRPQDINEIRRPLDVNPNGEGLLCDLLWADPSANISGW
CPNPRGVSYVFGLDVAQRWMRDNGLRAIVRAHMVQQTGFEVLGNNEVMTVFSAADYRESG
GWPGLALDVGPVGTGAGVKALAASQPCWMFWSTGWLPGCAGWRG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgctagactggctgctggggctcgggggatcgcccaagatccgcccgaagcacctgcag
gatatcgtggagcagttgctctcgcagcagcggcccggcagcggggaacagcccttcccc
ctgaatgagagagagctgaagcggctatgcggcgcggccaaggaggtgctgctgaaggac
ccctctctggttgagctcaggaccgacgcgcaggtggtggtggtgggcgacctgcacggc
cagtaccaggacttgcagcgcatctttgagcggctggggcggccgggcagcgaccccaag
gtgtgggtgttcctaggagactacatcgacggggtgaggcgggggatgaggggctggccc
atgggtctggagattgtggccacactgctggcgctcaagctgcggcaccccacccaggtc
ttcatgctccgcggcaatcacgagtgcagcgagatcacggtgctgtttggtttctgcggg
gagtgccagcggcgcagcacgctggcggtgtgggaggccgtcatgcaggtatttgacgcg
ctgcccctggcggcccagctcaacggcagcgtgtttctgtgccacggcggcatcagcccc
cacctcaagcggccgcaggacatcaacgagatacggcgcccgctggatgtgaaccccaac
ggcgagggcctgctgtgcgacctgctgtgggccgatcccagcgccaacatcagtggctgg
tgccccaacccgcgcggcgtctcctacgtctttggcctggacgtggcgcagcggtggatg
cgggacaacgggctgcgcgccatcgtgcgggcgcacatggtgcagcagacggggtttgag
gtgctgggcaacaacgaggtcatgacggtcttctcggcggcagactatcgcgagtcgggt
gggtggcctggcctggccttggatgtgggccctgtggggacaggagcaggggtgaaggcg
cttgccgcgagccagccatgttggatgttctggtcgaccggctggctgcctggctgcgcg
ggctggcgtgggtga
DBGET
integrated database retrieval system