Crocosphaera watsonii: CwatDRAFT_2401
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Entry
CwatDRAFT_2401 CDS
T05097
Name
(GenBank) DNA-directed RNA polymerase
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cwa
Crocosphaera watsonii
Pathway
cwa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CwatDRAFT_2401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cwa03021
]
CwatDRAFT_2401
03400 DNA repair and recombination proteins [BR:
cwa03400
]
CwatDRAFT_2401
Enzymes [BR:
cwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CwatDRAFT_2401
Transcription machinery [BR:
cwa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CwatDRAFT_2401
DNA repair and recombination proteins [BR:
cwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CwatDRAFT_2401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
EAM49874
UniProt:
Q4C148
LinkDB
All DBs
Position
7446..8390
AA seq
314 aa
AA seq
DB search
MTQFQIECIESKTQKNQSQYSKFVLEPLERGQGTTVGNSLRRVLLANLEGAAVTAIRIGG
VNHEFATIPGVREDVLEIMLNMKEIVLKSYTEQPQIGRLVATGAAHVTAGQFELPSEVEV
VNPTQPIATLTEGAKLEMEFRIEKGVGYVPVERSSEEPAALDFLQIDAVFMPVTKVNYSV
ESIRGEEGEAKDRLMLEIWTNGSFNPKEALSKAADILVDLFNPLKDLNQLETAVQEYPDE
ENPQSQIPIEELQLSVRAYNCLKRAQINTVADLLDYSQEDLLEIKNFGQKSAEEVIEALQ
KRLGITLPQEKAKA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcaatttcagattgagtgtatagaatctaagactcagaaaaatcagagtcaatat
agtaaatttgtcctggaaccgttagaacggggtcaagggacaaccgttggcaattccctg
agacgggtgttattagccaacttagaaggggcagcagtgacagccatccgcattggaggg
gtaaatcatgaatttgccaccattcctggggtgagagaagatgtcttagaaatcatgtta
aacatgaaagagatcgttctcaaaagctatacagagcagccccagattggtcggttagtg
gctacgggggcggcccatgtcacagccggccagtttgagttaccctcagaagtggaagtg
gtgaacccaacccaacctattgctaccttaaccgagggagcaaaactagagatggagttc
cgcatcgaaaaaggggtggggtatgtaccagtagaaaggtctagcgaagaaccggcagcc
ctggacttcttacagatcgatgctgtgtttatgcctgttaccaaggtgaattacagtgta
gagagtattcgtggagaagaaggggaagctaaagaccgtcttatgctagagatttggact
aatgggagttttaaccccaaagaagccttatccaaagcagcggatattttggtggactta
tttaatcccctcaaagacctcaatcaactggaaaccgccgttcaagaatacccagacgaa
gaaaatcctcaaagtcagattcctatcgaagaattacagttatccgtaagggcttacaac
tgcttaaaacgggcgcaaattaatacggtggctgacttattggattatagtcaagaggat
ctcttggaaattaaaaactttgggcagaaatcggctgaagaagtcattgaagccctacaa
aaacgtttggggattacgttaccccaagaaaaagccaaagcttag
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