Corynebacterium wankanglinii: IA203_01015
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Entry
IA203_01015 CDS
T08053
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cwk
Corynebacterium wankanglinii
Brite
KEGG Orthology (KO) [BR:
cwk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cwk03016
]
IA203_01015 (thpR)
Enzymes [BR:
cwk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
IA203_01015 (thpR)
Transfer RNA biogenesis [BR:
cwk03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
IA203_01015 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QNP94209
LinkDB
All DBs
Position
201347..201889
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AA seq
180 aa
AA seq
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MRRLFAAIVPPADVREHLITALRPIRNFSGTEVRWSDPDNWHITVAFYGAQPNDAAAVTD
HLAQATAFTRPLRLHLRGAGCFDRRTLWIGVGGDKAPLKDLMADCQLDPDVRRRQRAHLS
VARTGTRTRDPWLLDDHAHALAIYSGPEFAADEVLLLESHLGKGRSGGPKYEVVDTFYLR
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcctcttcgcagcgatcgtcccaccggccgatgtccgcgaacacctcatcacc
gcgctgcggcccatccgcaacttctcgggcacagaagtgcggtggtccgacccggacaat
tggcacatcacggtggcgttctacggggcgcagcctaacgacgccgcggcagtcaccgac
cacctcgcccaagccaccgcgttcacccggccactccgcctgcatttacggggggccggg
tgttttgaccggcgcaccctgtggatcggggtgggcggggacaaagcaccgctcaaagac
ctgatggcggactgccaactcgacccagacgtgcggcgtcggcagcgcgcgcacctgtct
gtcgcgcggacgggcacgcggacgagggacccgtggcttctggacgaccacgcccatgcc
ctcgccatctactccgggcccgagtttgcggccgatgaagttctgctgctcgaatcccac
ctgggaaagggccgaagtggcggcccgaaatacgaggtggtggacaccttctacctgcga
taa
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