Cycloclasticus sp. PY97N: CPC19_03830
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Entry
CPC19_03830 CDS
T05126
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cyy
Cycloclasticus sp. PY97N
Pathway
cyy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPC19_03830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyy03400
]
CPC19_03830
Enzymes [BR:
cyy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CPC19_03830
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CPC19_03830
DNA repair and recombination proteins [BR:
cyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPC19_03830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_Tnp_IS1595
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
ATI02626
LinkDB
All DBs
Position
complement(768025..768840)
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AA seq
271 aa
AA seq
DB search
MPELPEVETTRRGIAPHIEGKQVSQVIVRQAKLRWPVSPEVSTLLPGLCINHVKRRAKYL
LLETDKGTLIIHLGMSGSLRIVQASTTPEKHEHIDIIFSNNTCLRYKDPRRFGSLLWSTD
VIENHKLIQHLGPEPLSDAFNIDDFYPKAQLKKTPIKSFIMDGQVVVGVGNIYASEALFQ
AGIHPKRAANKVSKKRLINLVFAIKKILAQAIQQGGTTLKDFVNSDGNPGYFQQTLNVYG
QKDKPCPRCKTPIKQIIIAQRSTFYCTHCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttaccagaagtcgaaacgactcgtcgcggaattgcccctcatattgaaggc
aaacaagtttcacaggtcattgtccgacaagcaaaattacgttggcccgttagcccagaa
gtttccaccttattaccgggtctttgcattaaccatgttaaacgtcgtgcaaaataccta
ttgcttgaaaccgataagggcacgttaattatccacctgggcatgtcgggtagtttacgc
atcgttcaggcttcaacgacaccagaaaaacacgaacatattgacattatttttagtaat
aacacctgcttgcgctataaagatccgcgccgtttcggttcgctgttatggtcaacagat
gtcattgaaaatcacaaattaatacaacaccttgggccagagcctttatccgacgcattt
aatattgacgatttttacccaaaggctcaattaaaaaaaacacccattaaaagttttatt
atggatgggcaagtcgttgtcggcgttggtaatatttatgctagcgaagcattatttcag
gcaggcattcaccctaaacgtgccgctaataaagtttctaaaaagcgcttgattaacctc
gtttttgccattaaaaaaatcctagcgcaagctatacaacaaggcggcacaacgttaaaa
gattttgttaacagtgacggcaaccctggttattttcaacaaacacttaatgtttacggg
caaaaagacaaaccttgtccaaggtgcaaaacacccattaaacaaatcattattgctcaa
cgatcgaccttttactgcacccactgccaacgttaa
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