Corynebacterium zhongnanshanii: IAU67_08265
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Entry
IAU67_08265 CDS
T07917
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
czo
Corynebacterium zhongnanshanii
Pathway
czo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
czo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IAU67_08265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
czo03021
]
IAU67_08265
03400 DNA repair and recombination proteins [BR:
czo03400
]
IAU67_08265
Enzymes [BR:
czo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IAU67_08265
Transcription machinery [BR:
czo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IAU67_08265
DNA repair and recombination proteins [BR:
czo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IAU67_08265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
QNP93285
LinkDB
All DBs
Position
complement(1837250..1840762)
Genome browser
AA seq
1170 aa
AA seq
DB search
MLEGPILAVSRQTSSVAGIPGASQRHSFAKIDSPIEVPGLLDLQRESFAWLVGTPEWRAR
AQAEAGEGVRITSGLEDILEELSPIEDYSENMSLTLSEPRFDEAKSTIDEAKEKDINYAA
PLYVTAEFTNAMSGEIKSQTVFIGDFPIMTENGTFIINGTERVVVSQLVRSPGVYFDASI
DATTERPLHAVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGLSTQEITDR
FGFSEIMMSTLEKDGVANTDEALLEIYRKQRPGESPTRDSAQALLENSFFKDKRYDLAKV
GRYKVNRKLGLGGDHEGNMTLTEEDILTTIEYLVRLHAGEKTMTSPEGVEIPIGVDDIDH
FGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFG
TSQLSQFMDQNNSLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLSSYARVNSFGFIETPYRRVVDGKITDEVEYFTADEEDRHVIAQANTPFDADH
KFTEDRIEVRLRGGDVEVVPADQVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQ
RQAVPLMRSEAPYVGTGMELRAAYDAGDMIIAPKAGVVEYVSADYITVMDDDGVRDTFML
RKFERTNQGTSYNQKPLVDEGDRVEAGQVLADGPGTDNGEMALGKNLLVAFMPWEGHNYE
DAIILNQRMVEEDVLTSIHIEEHEIDARDTKLGPEEITRDIPNVGEDVLKDLDERGIVRI
GADVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRV
FSREDDDDLAAGVNEMVRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPAEDMPFLPDGTP
VDIILNTHGVPRRMNIGQVLEVHLGWLAKAGWKVDTESQDPKIQAMLETLPEHLYDVPAD
SLTATPVFDGASNAELSGLLRSSLPNRDGIRLVDDFGKAQLIDGRSGEPFPYPVAVGYMY
ILKLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELL
TIKSDDVVGRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLAADGTPMELSS
DDDDELDSANAALGINLSRDERPDADLEVG
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacccatcttggcagtctcccgccagacaagttcagtggccggaatccct
ggagcatctcagcgacactcgttcgcgaagattgattctcccatcgaggttccaggcctt
cttgacctccaacgagagtccttcgcttggctcgttggcacccctgagtggcgtgcccgt
gcacaagccgaggcaggggagggcgttcgcatcaccagcggactcgaggacatcctcgaa
gagctttccccgattgaagattattcggagaacatgtccctgaccctctccgaaccacgc
ttcgatgaggcaaagtccaccatcgacgaagcgaaggaaaaggacattaactacgcggca
ccactgtacgtgaccgcggagtttaccaacgcgatgtctggtgaaattaagtcccagacc
gtgttcatcggcgatttcccgatcatgacggaaaacggcaccttcatcatcaacggcacc
gagcgtgttgttgtgtcccagctggtgcgttcccccggcgtgtactttgacgcgtccatc
gacgcgaccacggagcgtcccctgcacgccgtgaaggtgatcccttcccgtggtgcatgg
ctggagttcgacgtggacaagcgcgataccgtcggcgtgcgcatcgaccgcaagcgtcgc
cagcccgtgactgttctgctgaaggccctgggcctcagcacccaggagatcacggaccgc
ttcggcttctccgagatcatgatgtccaccctggaaaaggacggtgtggccaacaccgac
gaggcactgctggagatctaccgcaagcagcgcccaggcgagtcccccacgcgcgactcc
gcacaggctttgctggagaactccttcttcaaggacaagcgctacgacctggcgaaggtg
ggtcgttacaaggtcaaccgcaagctgggtctgggtggcgaccacgagggcaacatgacc
ctcacggaagaggacatcctcaccaccatcgagtacctggtgcgcctgcacgcgggtgag
aagaccatgacctccccagagggcgtggagatccctatcggcgtggatgacatcgaccac
ttcggtaaccgccgcctgcgcaccgtgggtgagctgattcagaaccaggtgcgtgtgggt
ctgtcccgcatggagcgcgtggtgcgcgagcgcatgaccacgcaggacgcggagtccatc
actccaacgtccctgattaacgtgcgccctgtgtccgccgcgatccgtgagttcttcggt
acctcgcagctgtcccagttcatggaccagaacaactccctgtctggcctgacgcacaag
cgccgcctgtccgcactgggcccgggtggtctgtcccgtgagcgcgctggcctggaggtc
cgtgacgttcacccatctcactacggccgcatgtgcccgattgagactcctgagggtccg
aacattggtctgatcggttccctgtcttcctacgctcgcgtgaatagcttcggcttcatc
gagacgccgtaccgtcgcgtggtggatggcaagatcaccgacgaggtggagtacttcacc
gcggatgaggaggatcgccacgtcattgcccaggcgaatactccgttcgacgcggatcac
aagttcaccgaagaccgtattgaggtccgtctgcgcggcggcgacgtggaggtcgttccg
gcagatcaggttgattacatggacgtgtcgccgcgtcagatggtttccgtggcgactgcg
atgattccgttcctggaacatgacgacgccaaccgtgcgttgatgggagcgaacatgcag
cgtcaggctgtgccactgatgcgctccgaggctccgtacgtgggtaccggtatggagttg
cgtgcggcctacgatgccggtgacatgatcatcgctccgaaggccggtgtggtggagtac
gtgtccgctgattacatcaccgtcatggatgacgatggtgtgcgtgacacgttcatgctg
cgcaagttcgagcgtacgaaccagggcaccagctacaaccagaagcctctggttgacgag
ggtgaccgcgtggaggccggccaggttctggctgacggcccgggcacggacaacggtgag
atggcactgggtaagaacctgctggttgccttcatgccgtgggaaggccacaactacgag
gacgcgatcatcctgaaccagcgcatggtggaggaggacgttctgacgtccatccacatc
gaggagcacgagattgatgctcgtgacaccaagctgggaccggaggagatcacccgcgac
attcctaacgtgggtgaggacgttctgaaggacctggatgaacgcggtattgtccgcatc
ggtgcggatgttcgcgatggtgacatcctggttggtaaggtcaccccgaagggtgagacg
gagctgacccctgaggagcgcctgctgcgcgccatcttcggggagaaggcccgcgaggta
cgcgatacttccatgaaggtaccgcacggtgagaccggtaaggtcatcggcgtgcgcgtg
ttctcccgtgaggacgacgacgatctggcagccggcgtgaacgagatggttcgcgtgtac
gtggcccagaagcgcaagatccaggacggcgataagctggccggtcgccacggtaacaag
ggtgtggtgggcaagattctgcctgctgaggacatgccattcctgccggacggtactccg
gtggacatcatcctgaacacccacggtgtgcctcgccgtatgaacatcggccaggtgctg
gaagtgcacttgggctggttggcgaaggccggctggaaggttgatacggagtcccaggat
ccaaagatccaggcgatgctggagaccctgccggagcacctgtacgacgttcctgcagat
tccctgacggctacccctgtgttcgacggtgcgtcgaacgcggagctgtccggtctgctg
cgttcctccctgccgaaccgtgatggcattcgcctggtggatgatttcggtaaggcccag
ctgattgacggccgttccggcgagccgttcccatacccggtggctgtgggctacatgtac
atcctgaagctgcaccacttggtggatgagaagattcacgctcgttccacgggtccttac
tccatgattacccagcagcctctgggtggtaaggctcagttcggtggtcagcgcttcggt
gagatggaggtgtgggctatgcaggcgtatggtgccgcctacacgctgcaggagcttctg
accatcaagtccgatgacgtggtgggccgtgtgaaggtctatgaagccattgtgaagggt
gagaacatccctgatcctggtatccctgagtccttcaaggtgctgttgaaggagctgcag
tccctgtgcctgaacgttgaggttctggccgcggatggtactccgatggagctgtcttcc
gacgacgacgatgagctggacagcgctaacgctgccctgggcatcaacttgtcgcgtgat
gagcgtccggatgctgacttagaggtcggctag
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