Delftia acidovorans: Daci_0819
Help
Entry
Daci_0819 CDS
T00620
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
dac
Delftia acidovorans
Pathway
dac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Daci_0819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dac03400
]
Daci_0819
DNA repair and recombination proteins [BR:
dac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Daci_0819
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Daci_0819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
BCA_ABC_TP_C
nSTAND1
AAA_23
AAA_21
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ABX33465
UniProt:
A9BS55
LinkDB
All DBs
Position
912751..915864
Genome browser
AA seq
1037 aa
AA seq
DB search
MPGSHTISEDGGLDRAADSRSQPDGRYLGLALAQSRIAIRGARTHNLKNIDLDIPRNRLV
VITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGRLDKPDVDLIEGLSPAISIEQ
KATSHNPRSTVGTVTEINDYLRLLFARAGTPYCPDHNLPLQSQTISQMVDAALALPEDTR
LMVLGPLARNKKGEFAELFAQMQAQGYVRFRIDGKIHESHSLPTLEKNERHDIDVVIDRL
KVRADAQQRLAESFEAALRAGGADAGGRVIALEMDSGKEHLFSAKFACPLCSYSLPELEP
RLFSFNSPMGACPGCDGLGCTESFDPERVVAFPTLSLASGAVKGWDRRNGYYFSMLESVA
RHYGTDVELPFEELPEKVRHVVLWGSGEEEMPFSYVFDSGARKGESMVKSHPFEGIIPNI
TRRWRETESSVVRDDLARLRSVAVCPDCGGTRLRREARFVRIGEGEQARAIYEVGHATLA
EAHAWCASLQLSGAKAEIAGKVVREIASRLLFLNDVGLSYLSLERGADTLSGGEAQRIRL
ASQIGSGLTGVMYVLDEPSIGLHQRDNDKLIGTLQHLRDIGNSVIVVEHDEDMMRAADQI
IDLGPGAGVHGGRVMAQGSYEEVRANPDSPTGRYLAGTQRIEVPARRTPWQPVLEATAEG
EARPAAKGFPARAQQPPANPDNATAPGAPQLQALRVVGARGHNLKGVTADFPVGLLTCVT
GVSGSGKSTLVNDTLYTEAARQIHRAGGEAAPHDDIIGMGHFDKVINVDQSPIGRTPRSN
PATYTGLFTPIRDLMAETNTAKERGYGPGRFSFNVAGGRCEACQGDGVVKVEMHFLPDVY
VPCDICNGQRYNRETLEVQWKGRNISQILEMTVEDAHAFFKDVPTIARKLQTLLDVGLSY
IRLGQSATTLSGGEAQRVKLAQELSKRDTGRTLYILDEPTTGLHFADIALLLKVLQQLRD
AGNTIVVIEHNLDVIKTADWIIDMGPEGGSGGGQVVATGTPEDVAANPASHTGRYLRPYL
EAASAPAQAKPGRKNAK
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgcctggttcccacacgatttccgaagacggcggcctggaccgggccgccgactcccgc
tcccagcccgacggccgctaccttggcctggcgctggcgcagtcacgcatcgccatccgc
ggtgcgcgcacgcacaacctcaagaacatcgacctggacattccgcgcaaccgcctggtg
gtgatcaccgggctgtcgggctcgggcaagtccagcctggccttcgacacgctgtatgcc
gagggccagcgccgctatgtggagagcctgtcggcctatgcgcgccagttcctggggcgg
ctggacaagcccgatgtggacctgatcgagggcctgtcgcccgccatcagcatcgagcag
aaggccaccagccacaacccgcgctccaccgtgggcacggtgaccgagatcaacgactac
ctgcgcctgctgttcgcacgcgccggcacgccctactgccccgaccacaacctgccgctg
cagtcccagaccatcagccagatggtggatgcggccctggccctgcccgaggacacgcgc
ctcatggtgctggggccgctggcgcgcaacaagaagggcgagttcgccgagctgttcgcg
cagatgcaggcccagggctatgtgcgctttcgcatcgacggcaagatccacgagtcccat
tccctgcccacgctggagaagaacgagcgccacgacatcgacgtggtgatcgaccgcctc
aaggtgcgcgccgacgcccagcagcgcctggccgagagcttcgaggccgccctgcgcgcg
ggtggcgccgacgccggcggccgcgtgatcgccctggagatggacagcggcaaggaacac
ctcttcagcgccaagttcgcctgcccgctgtgcagctattcgctgcccgagctggagccg
cgcctgttctcgttcaattcgcccatgggcgcctgcccgggctgcgacggcctgggctgc
actgagtccttcgaccccgagcgcgtggtcgccttccctacgctgagcctggccagcggc
gccgtcaagggctgggaccggcgcaacggctactacttctccatgctggagagcgtggcg
cgccactacggcaccgatgtggaactgcccttcgaggagctgcccgagaaggtgcgccat
gtggtgctctggggctcgggcgaggaggaaatgcccttcagctacgtcttcgacagcggc
gcgcgcaagggcgagtccatggtcaagagccatcccttcgagggcatcattcccaacatc
acgcggcgctggcgcgagaccgagtccagcgtggtgcgcgacgatctggcgcggctgcgc
agcgtcgccgtctgccccgactgcggcggcacgcggctgcgccgcgaggcgcgcttcgtg
cgcattggcgagggcgagcaggcccgcgccatctacgaagtgggccacgccacgctggcc
gaggcccatgcctggtgcgcgtccctgcagctgtcgggcgccaaggccgagatcgcgggc
aaggtggtgcgcgagatcgcctcgcgcctgctgttcctcaacgacgtgggcctgagctac
ctgagcctggagcgcggcgcggacaccctgtccggcggcgaggcccagcgcatccgcctg
gccagccagatcggcagcggcctgacgggcgtgatgtatgtgctggacgagcccagcatc
ggattgcaccagcgcgacaacgacaagctcatcggcacgctgcagcacctgcgcgacatc
ggcaacagcgtcatcgtggtcgagcacgacgaggacatgatgcgcgcggccgaccagatc
atcgacctggggcccggcgcgggcgtgcatggcggccgcgtcatggcccagggcagctac
gaagaggtgcgcgccaatcccgattcacccacgggccgctacctggcgggcacccagcgc
attgaagtgcctgcgcggcgcacgccctggcaaccggtgctggaggcaacggccgagggc
gaggcccggccagcggccaagggctttccggcccgtgcccagcagcccccggccaatccc
gacaacgcaaccgcccccggcgcgccgcaactgcaggccctgcgcgtcgtgggcgcacgc
ggccacaacctcaagggcgtgacggcggactttcccgtgggcctgctgacctgcgtgacc
ggcgtctcgggctcgggcaagagcaccctggtcaacgacacgctctataccgaggccgcg
cgccagatccaccgtgccggcggcgaggccgcgccgcacgacgacatcatcggcatgggc
catttcgacaaggtcatcaatgtggaccagtcacccataggccgcacgccgcgcagcaac
ccggccacctacacgggcctgttcacgcccatccgcgacctgatggccgagaccaacacc
gccaaggagcgcggctacggccccgggcgcttctcgttcaacgtggccggcggccgctgc
gaggcctgccagggcgacggcgtggtcaaggtggagatgcacttcctgcccgatgtctac
gtgccctgcgacatctgcaacggccagcgctacaaccgcgagacgctggaggtgcagtgg
aagggccgcaacatctcccagatcctggagatgacggtggaggacgcccatgccttcttc
aaggacgtgcccaccatcgcccgcaagctgcagaccctgctggacgtgggcctgtcctat
atccggctgggccagagcgcgaccacgctgtcgggcggcgaggcgcagcgcgtcaagctg
gcccaggagctgtccaagcgcgacacggggcgcacgctctacatcctggacgagcccacg
acgggcctgcacttcgccgacatcgccctgctgctcaaggtgctgcagcagctgcgcgat
gcgggcaacaccatcgtggtcatcgagcacaacctggacgtgatcaagacggccgactgg
atcatcgacatgggccccgaaggcggctcgggcggcggtcaggtggtggccacgggcacg
cccgaggacgtggcggccaacccggccagccatacggggcgctatctgcggccctatctg
gaggcagcgtcggctcctgcgcaggccaagccaggccgcaagaacgcaaagtga
DBGET
integrated database retrieval system
