Dickeya ananatis: V6C41_02055
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Entry
V6C41_02055 CDS
T11170
Name
(GenBank) polysaccharide lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dad Dickeya ananatis
Pathway
dad00040
Pentose and glucuronate interconversions
dad01100
Metabolic pathways
dad02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
V6C41_02055
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6C41_02055
Enzymes [BR:
dad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
V6C41_02055
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
XKY18693
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Position
493390..494547
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AA seq
385 aa
AA seq
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MNNSRVSSAGKKSLLAAIIATAMVTSAAHAAALQTSKATEAASTGWATQNGGTTGGAKAA
SAKIYAVKSISEFKAALNGSDSDPKIIQVTGAIDISGGKAYTSFDDQKARSQISIPSNTT
IIGIGSNGKFTNGSLVIKGVKNVILRNLYIETPVDVAPHYETGDGWNAEWDASVIDNSTN
VWVDHVTISDGSFTDDKYTTKDGETYVQHDGALDIKKGSDYVTVSNSRFELHDKTILIGH
SDSNGSQDSGKLRVTFHNNVFDRVTERTPRVRFGSIHAYNNVYLGDVNAKVYRYLYSFGL
GTSGSILSEGNYFNISNLKSNCDVVKSFNSKVLSDNGSLINGGAAGLNNCSFTTYKPTLP
YKYSVQSMTSSLANTITSSAGYGKL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaataactctcgtgtgtcttctgcaggaaaaaaaagtttactggcagcgatcattgct
actgcgatggtgacttccgctgctcacgccgcagctttgcaaaccagcaaagcgaccgaa
gccgcttccaccggctgggcgacacaaaacggcggtacgactggcggtgctaaagcggca
tcagccaaaatttatgccgtgaaaagtatcagcgaatttaaagccgcgctgaacggctca
gattccgaccccaaaatcattcaggtaaccggcgcgattgatatcagcggcggcaaagcc
tacaccagctttgacgaccagaaggcccgcagccaaatcagtattccgtccaataccacc
attatcggtatcggcagcaatggtaaattcaccaacggttcgctggttatcaagggcgta
aaaaacgttatcctgcgtaacctgtatatcgaaacgccggtagacgtcgcaccgcattat
gaaaccggtgatggctggaacgccgagtgggatgcatccgttatcgataactcaaccaac
gtctgggttgaccatgtcaccatcagcgatggcagcttcaccgacgacaaatacaccacc
aaagatggcgaaacctatgtgcagcatgacggtgcactggatatcaagaaaggctctgac
tacgttaccgtttccaacagccgtttcgaactgcacgacaaaaccattctgatcggccac
agcgacagtaacggttcacaagattccggcaaactgcgcgttaccttccacaacaacgtg
tttgaccgcgtaaccgagcgtactccgcgtgtgcgctttggtagcatccacgcttacaac
aacgtctatctgggcgacgtgaacgcgaaggtttatcgctacttgtatagctttggtctg
ggcaccagcggcagcattctgtctgaaggtaactacttcaacatctctaatttgaaatca
aattgtgatgtagtgaagtctttcaacagcaaagtgctctctgacaatggttcactgatt
aatggtggcgcggccgggttaaacaactgcagctttaccacttacaaacccactctgccg
tacaaatattcggttcagagcatgacaagcagcctggctaacaccatcaccagcagcgca
ggctacggcaaactgtaa
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