Desulfosporosinus acidiphilus: Desaci_3805
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Entry
Desaci_3805 CDS
T02148
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
dai
Desulfosporosinus acidiphilus
Pathway
dai02020
Two-component system
dai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Desaci_3805
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Desaci_3805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dai03021
]
Desaci_3805
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dai02035
]
Desaci_3805
Transcription machinery [BR:
dai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Desaci_3805
Bacterial motility proteins [BR:
dai02035
]
Flagellar system
Flagellar assembly proteins
Stator
Desaci_3805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
UPF0175
CT_C_D
HTH_Mga
HTH_28
HTH_5
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AFM42686
UniProt:
I4DA62
LinkDB
All DBs
Position
complement(3966878..3967630)
Genome browser
AA seq
250 aa
AA seq
DB search
MIPNTYETAARGEWKQESIERYLPLVKRIAGRLSMSLPPHIEEDDIIGYGVFGLLDALER
FEAARGFKFETYASIRIRGAMIDGLRTMDWVPHSARQKVKRVQDGFAELEYQLGRAATTE
EVAKMLKLKVEEIEGILAQAQVLTLTSFDETTVDNEGESNGSPLNLLVDTNAQEAYQAIE
KEEQKRILAQAVEKLPEKEKLVVALYYQEELTLKEIAAVLKLSESRISQLHSQAIMRLRG
RLSRQKKNLF
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgataccaaatacatatgaaaccgctgcacgcggagagtggaaacaagagtctatcgaa
cgatatttgccgttggtcaagcgcatagcgggtcggttgtctatgtcactcccaccgcat
attgaggaagatgatattataggatatggggtttttgggctactggatgctttggaaagg
tttgaagctgctcgggggttcaaatttgagacgtatgcttctatccggattcgcggagct
atgatcgacggactccggacgatggattgggttccgcattctgcgagacaaaaagtaaaa
cgcgttcaagacgggtttgcggaactggaatatcaattagggcgggcggcaacgactgag
gaagttgctaaaatgctgaaactaaaggtcgaagaaatagaaggaattctcgcccaagct
caggttctaaccctcacatcctttgacgaaacgacagtagataatgagggagaaagcaat
ggttcgccgctcaatctgctcgtggacaccaatgctcaggaagcataccaggctattgag
aaagaggaacaaaaacgtattctggctcaggctgtggaaaaattgcccgaaaaagaaaag
ttagtggttgccctttattaccaggaagaactgaccctaaaagaaattgctgccgtccta
aaattgtcggaatccagaatatctcaacttcattctcaagcgattatgcgcttaagagga
agactcagccggcagaaaaagaatttattctaa
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