Dermacentor albipictus (winter tick): 135906042
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Entry
135906042 CDS
T11267
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb04382
Cornified envelope formation
dalb04512
ECM-receptor interaction
dalb04518
Integrin signaling
dalb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135906042
04518 Integrin signaling
135906042
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135906042
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135906042
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dalb04147
]
135906042
00536 Glycosaminoglycan binding proteins [BR:
dalb00536
]
135906042
Exosome [BR:
dalb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135906042
Glycosaminoglycan binding proteins [BR:
dalb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135906042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
135906042
NCBI-ProteinID:
XP_065293260
LinkDB
All DBs
Position
1:complement(28303086..28408892)
Genome browser
AA seq
1773 aa
AA seq
DB search
MPRPPGRDKAARPRLTAAASALGLVLVLLLHLPSSADAAACKGCAIQPCLCKGEKGAVGH
PGLPGSPGTEGSPGSLGPLGPTGRRGERGLAGDTGAIGPKGIRGEPGATGFPGRPGAPGK
PGLDGLLGEPGIPGCNGSKGALGPHGPAGGWGPPGPRGPRGDYGPKGLPGDGGINSLGIR
GDPGDDGRPGPQGALGFPGFHGEKGVRGDSGPAGRPGPPGSPGPKGVQGDDAQGDKGPKG
EPGHPGDQGPPGDSYFFVGPPTIQQIPGDRGPKGEKGDIGSKGERGTRGVDGESGLPGND
GLKGEKGDIGEEGPRGKRGKDGATGPSGEKGQKGEPGFTGIDGGSGDAGEQGEKGRVGSL
GTQGPPGPPGATIEIGSPIPGPRGPQGVPGDMGLPGRDGEKGATGAMGYRGTVGEPGVPG
EAGTPGPRGLAIKGEPGEDGYPGVPGLRGQQGAPGPQGPQGDKGQPGLTVVGAPGDDGRP
GRDGRPGIPGIRGDPGPTGDQGTPGRGVPRPGPVGPPGLRGPQGDPGLPGRPGWPGEDGR
PGPRGDDCGQCSSGRPGDRGEPGDDGRPGSDGSMGFPGSTGAPGVKGDRGYTGPRGIPGL
PGRDGEPGWDGQKGEKGFPGEFIFPPGPLPPGSIKGEKGEPGDYGPRGQPGREGNPGPQG
LPGVVGSKGDTGDYGDPGYRGSDGAEGFPGLAGRKGEAGDFYIGEKGDDGEEGEPGETGL
TGPPGDMGDPGLPVNAPDNLQHLTGDKGVPGLPGQSGKEGPKGEKGSPGYDGLPGRQGDK
GDHGTPGYSQQGPVGLKGYPGLAGDQGPSGRRGAPGRTGERGYEGRPGPKGPRGPTGTGK
GTGPQGLPGVLGLKGEQGLPGYPGGPGPAGQPGYAGVKGQKGEQGYIGYSGPKGVKGDAG
DAGIGTQGPPGPPGYDGVKGERGIPGTPGTDGFPGVPGAKGEAGAPGAPGPRGRDGQPGI
RGQPGTPGLEGYPGSKGRKGEAGEFGPPGWDGLAGEPGYPGPKGGKGERGVNGQPGFPGL
PGRPGLPGERGDVGYPGLEGLKGDRAQRGIRGDDGFPGPDGLPGPKGPVGFPGLPGRKGE
RGEPGRALGAPDGLPGEPGPRGFDGFPGHPGPVGEPGNPGLPGPPGLDGEPGFQGVAGLD
GTDGLPGLPGLPGPDGFPGLPGYPGLKGDSGFDGRPGPPGPSGPPGVPGPPGFDGKPGIK
GETGEPGFPGLSTFEISKGDKGEPGRPGIPGPRGPPGDDGFPGLKGAKGQVGDPGFDGTP
GAAGRPGPKGYPGNAGPPGTEGAPATDVYPGPKGDEGDPGPPGFPGIPGLKGEAGQPGLP
GPDGPPGYPGVAPIGFKGEQGDTGLSGLPGTPGLDGLQGKHGYPGNDGLKGSRGDSGLPG
PVVPGLPGIPGARGQDGRRGYKGEKGAPGESGFPGFPGLKGARGESGFPGPSGRPGINGT
KGAKGVRGSSSPSQQRQMPPGIQGDRGYPGANGLPGPPGDQGFPGVNGEPGDYGLPGFPG
PPGYSGPRGLPGDEGFQGLPGYPGQPGTPGRPGNRGPSGGPARSRGYFFTRHSQTSRVPE
CPRGTHPLWSGYSLLYILGDEKAHGQDLGSAGSCLRRFSTMPFLFCSLNNVCNFASRNDY
SYWLSTPEPMPMAMTPIVGRDIQKYISRCSVCESSTQVIAIHSQTLEVPECPEGWDGVWS
GYSFFMNTDSGAEGSGQPLVSPGSCLEEFRPNPFIECHGHGRCNYYTTAFSYWLATIERH
DMFRPPDPQTLKAGDLRTRVSRCKVCRRQVIVP
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggccccccggccgggacaaagccgctcggccgcggctgaccgccgctgcatct
gcgctcggtctcgtactcgtcctgttgctccacctgccgtccagcgccgacgctgcggcg
tgcaaaggttgcgccatccagccatgcctgtgcaaaggtgaaaaaggagccgtgggtcac
cctgggcttcctggttcgccgggcaccgagggatcaccaggaagcctcggtccgctggga
ccgaccggtcgccggggtgaacgtggcttggcaggagacaccggagccatcggacccaaa
ggaatccggggtgaacccggagcaaccggattcccaggcaggccaggtgcaccgggaaaa
cccggtcttgatgggttgcttggagagccgggaataccaggctgcaacggaagcaagggc
gccctcggtccccatggtcccgccggtggctggggcccgccaggaccgcgcggtccccgc
ggagactatggacccaagggattgcctggagatggcggaataaactcgctaggaattcgt
ggagatccaggagacgacggaagaccaggccctcagggcgcgcttggtttcccaggcttt
cacggcgagaaaggcgttcgaggagacagtggaccagcgggaagaccgggtcctccagga
tctccgggtcctaagggtgtacagggcgatgacgcacaaggtgacaaaggacctaaggga
gaaccaggtcatccgggagaccaaggtccacctggtgactcgtacttctttgtcgggccg
ccaaccattcaacaaatacccggtgacagaggaccgaagggtgaaaagggcgacattgga
agcaaaggtgaacgtggaacacgtggagtggatggagaaagtggcttgcctggcaacgac
ggcctcaagggagaaaaaggagacataggcgaagaagggccaaggggaaaaaggggcaaa
gacggagcgactggtccgtccggagaaaaagggcagaaaggagaaccaggatttacggga
atcgatggtggttccggtgatgcgggagaacagggagaaaaaggaagagtcggaagcctc
ggaacacagggaccaccgggcccaccaggagcgaccatagaaattggatcgcctatacca
ggacccagaggtccccagggcgtgcctggtgatatgggtctacctggacgcgacggcgaa
aagggtgccaccggtgcgatgggctatcgtggtacggtaggcgaaccgggtgtaccagga
gaggcaggaacacctggacctcgaggtcttgccatcaagggcgagcctggagaggacggc
tatccgggagtgccaggcctgcggggtcagcaaggagccccagggcctcaaggaccgcag
ggagataaaggccagccgggtctcacagtagtaggagctccgggagatgatggccgtccc
ggaagagatgggcgaccgggcatcccgggtatacgcggagaccccggaccaacaggtgac
cagggcacacccggtcgcggcgtgccgagacctggccccgttggacccccaggtctacgt
ggcccacagggagacccaggccttccaggccggccgggttggccgggtgaggacggccgc
ccgggacccagaggtgacgactgcggccaatgttcgtcgggcagacctggcgatcgcggt
gaaccaggagacgacggccgcccaggttccgacggctcaatgggattccccggaagtacg
ggtgcccctggagtgaaaggagacagaggttatacgggccctcgcggcattcctggccta
ccgggtcgggacggagaacccggctgggacggacagaagggtgagaaaggcttccctggc
gagttcatctttccgccgggcccgctaccgccgggctccatcaagggcgagaagggcgaa
cccggagactatgggcctagaggccagcctggccgcgagggcaaccccggaccgcagggc
ctgcctggtgtcgtgggctccaaaggagacacgggcgattacggagaccctggctaccgt
ggctccgacggcgcagaaggtttcccgggtctggctggtcgcaagggagaagcgggagac
ttctacatcggcgagaaaggagacgacggcgaggaaggagagcccggagaaacgggcttg
accggaccgcccggagacatgggtgatcccggacttcccgtaaacgctccggacaacctc
caacacttgacgggagacaaaggtgtaccaggcttgcctggccagtctggcaaagaagga
ccaaaaggagagaaaggatcgcccggctacgacggcttgcccgggcgacaaggagacaag
ggcgaccacggcacgccgggctactcccaacagggtcccgtggggctcaagggctacccg
ggactcgccggagaccaagggccctccggccgcagaggtgctcctggcaggaccggagag
cgcggctacgaaggacgtcccggcccgaagggcccgcggggaccgaccggcacgggtaag
ggcacgggaccgcagggcctgccgggtgtcttgggactaaagggcgagcagggccttcct
ggataccctggaggccccggtccggccgggcagccgggatatgccggagtaaagggacag
aaaggtgaacaaggctacatcggatacagcggaccaaagggagtgaaaggcgacgctggt
gacgccggaatcggtacgcaggggccccctggacctcctggctacgacggggtgaaggga
gagcggggtattcccggcactcctggcactgacggtttccccggcgtgcctggagccaag
ggcgaagcgggagcaccgggcgcaccaggaccacggggccgtgatgggcaacccggcatc
cgaggacagccaggaacgccaggtctcgaaggatacccgggctcgaaaggtaggaaaggc
gaggctggagagtttggcccacctggctgggatggacttgccggagagccaggataccct
ggacccaaaggaggcaaaggagagcggggcgtaaacggacagcccggatttccgggtctc
cctggcaggccgggtcttccgggtgaacgtggagacgtcgggtacccaggccttgagggt
ctgaagggagacagggcccaacgaggcattcgtggcgacgacggtttcccaggacccgat
ggtctgcctggtccaaagggtccggtcggatttccgggtcttcctggcagaaagggagag
cgcggagagccaggccgagcactgggcgcgccagacgggctaccgggagagccgggacct
aggggcttcgacggattccccgggcatcctggacccgtaggagaacccgggaacccggga
ttgcccggccctcctggactggacggagagccaggattccaaggtgtagcgggcctcgac
ggcacagacggcctgcctgggcttcccggtctccctggccctgacggattcccgggactt
ccaggatatcccggcttaaagggcgactcaggctttgatggacgcccaggcccccctggt
ccatcgggtccaccaggtgtccctggacctccgggctttgacggcaagccaggaatcaag
ggagagacaggagagcccggatttcccggtctttcgacgttcgagatcagcaagggagac
aagggagagccgggccggccgggaatccccggaccacgcggtcctcccggcgacgacggc
ttcccaggccttaaaggcgcgaagggccaggtcggtgaccccggtttcgacggcacgccg
ggcgctgcgggaaggcccggccccaaaggataccctggaaacgctggaccacctggaacg
gaaggagcacccgctactgacgtctacccgggaccgaaaggagacgaaggcgaccccgga
ccgcccggtttccccggtattccgggactcaaaggtgaagcaggacaaccaggacttcca
ggaccagacggaccgcccggctacccaggtgtcgccccgattggcttcaaaggcgaacaa
ggagacacaggactgagcggccttccaggcacccctggtctagacggacttcagggaaag
catggctaccccggcaacgatggattaaagggcagccgaggagattcaggcttgccggga
cctgtcgttcctggtttgccgggaataccaggggccaggggacaagacggtcggcgaggc
tacaagggtgaaaagggggcgcctggagaatcgggattccccggtttccctggactcaaa
ggcgcgagaggtgaatccggctttcccggaccctctggaaggcccggaataaacggaaca
aaaggtgctaaaggagtacgtggcagctcctctccgagccagcaaaggcagatgccgccg
ggtatccaaggagacagaggctacccaggcgccaacggattgccaggccctcccggcgac
caaggcttcccgggagtcaacggcgaaccgggagactacgggcttccgggatttccgggg
cctccaggctactccggccctcgaggtctcccgggtgacgaaggattccaagggctgcca
gggtaccccggtcagccaggcacaccgggacgtccaggaaatcgtggtccttcgggtggt
cccgccaggtctcgaggctactttttcaccaggcacagtcagacgtcacgagttccggaa
tgtcccagaggcacccatccgctctggtctggctattctctcctctacatactcggcgat
gagaaagcccatggccaagacttgggaagcgccggaagctgcttgcggagattcagcacg
atgccgttcctgttctgcagcctgaataatgtttgcaactttgcatcaaggaacgactac
agctactggctcagcactccagaaccaatgcctatggcaatgacaccaattgtgggaaga
gacatccagaaatacatcagccgatgcagtgtctgcgagtcttccacccaagtcatagcc
atacacagccagactctggaagtaccagagtgccctgaaggctgggacggtgtttggtct
ggctacagcttcttcatgaacactgactcgggagcggagggcagcggccagcccttggtc
tcaccaggttcctgtcttgaagagttccgacctaatccgtttattgaatgtcatggtcat
ggccggtgcaactactacactacagccttcagctactggttggcgacaatcgaacgccat
gacatgttcagaccaccagacccacagacgctcaaggcgggtgatctgagaacacgagtt
tctcgctgcaaagtttgcaggcggcaggttattgtcccttga
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