Dermacentor albipictus (winter tick): 135906678
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Entry
135906678 CDS
T11267
Symbol
Not1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135906678 (Not1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalb03019
]
135906678 (Not1)
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135906678 (Not1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135906678 (Not1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
NOT1_connector
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
135906678
NCBI-ProteinID:
XP_065294305
LinkDB
All DBs
Position
1:207473377..207582278
Genome browser
AA seq
2424 aa
AA seq
DB search
MNLDPLSFALSYISYSVSSLTKKNFKSSVQEISRLVALHGFEAERHLLRCLFSHVDFSGD
GKSSGKDFHQTQYLIQEFSSILSKPNFLSSVCFAIENPLHHQKSLRPSPLLLAHISRVLR
LNRVQEVVLGTCLLHSSSTELCICATQFIRLKLPDLLRSYTDSDSSTQEGDLQDCSPEVL
HLLLVELLNKNSEHFGVTNELKESFFENLRKDFPQDRVPVVLAPLLYNEASDVLMVKGMT
EPASNMSKPMELSHVDLIKEVGYGFTASVEECRQSLIQMGLRDPGPCMVARVLSMMANTH
TGLSEPLQGLGPSAASAWGADKDANTSHVTWNIDIFIQALYDLVPTLNWKEVISELDFPG
FFVKDRQGLKILWHGLCRGLGSDPFPTDRLYRVWRNPESQLSLFHQIMKNSDIVCLTDYK
YRPVSMEILKALPEDDNRDIANWKSLDLVETLLTLSEKVQYSSHVHDLFKYPVQHCPDLL
MLGLLQTSGPMQGFRQELLTNLVFVFLSNHPNSAIVLQAAWNVQNHASVVRPLIMHTMAD
WYMRGGESEQGRLSRILDVAQDLKALSVLLSSNSFPLVIDLACLASRREYLKLDKWLNDK
IFEHKEAFIQACVNFLKRRCPQIMGGIVKEENLPKSAQLPTETLATMLSCLQQYAGSVSQ
ELSETILTMSGNCSILLNKPRQPPPGVVKTPRGLEPAFSAASLNPSQAPQQQQQQQQQQQ
QQQQLEVLSSLGSLSMSGPAAAQAPPLGVGGGPPLFGSSFATPGSPAKLFGAPPSAAGSA
GPPPPAQGTSFSNVVPSLGDVASILPEMNQPVSKEIEDEANGYFQRIYNHPPHPTLSIAE
VLDMLKRFQESPIKSERDVFNCMIKNLFEEYRFFPQYPEKELIITAQLFGGIIEQSLVTY
MALGLALRYVLDALRKPFGTKMYYFGITALDRFKTRLKDYPQYCQHLASIPHFKDFPEHL
KEYVDCGARSQEPLNRPQGQTLPHNLAMLAQGLNPATTPQGPAVRAAPAAVPTSSAGVAA
TSGVVAKPTTVGGKDACPSTPPCPSFAGIHGIDHKYCLRQLDPNEKRDTPSIANPTNIDT
LLGATEKDDKLVIPPEAVQDKVAFIINNLSQVNLPQKTEEFKEVVKEEYWPWFAQYMVMK
RASIEPNFHTLYANFLDTVKIGELSKLVLRETFRNIKVLLTSDKALANFSDRSLLKSLGH
WLGMLTMAKNRPVLQVDMDVKSLLVEAYHKGQQELLYVVPFIAKVLESCAKSRVFKPPNP
WTMGILDVLSELHREPELKLNLKFEIEVLCKTLNLDINDLKPGMILKDQERRKRLDPQLS
PRHKVDSPPLPPSVVAPTAAPPSAAPPTLAPQGPSGVVTAAAGPGGPVAQVGLPPPQPEE
APATLGVSGPSMSAFPQPQFSYHDINVLSMTNLAQHIQINSQLPLFQAHPHLKQYVRTAI
DRAIQEWIMPVVERSLKIALTTCDQIVRKDFALDPEESRLRAAAHHMVRSLTAGMAMITC
RDPMLMTISNNLKAAFHTALRLQGASLPQKELLEQATTVVAQENVELACCFIQKTAIEKA
IPEIDKKLSQEYEIRKSARSEGRRYCDPVVLTYQAERMPEQIRLKVGGVTPQQMAVYEEF
ARNIPGFQPISERDQPSLFLPKPVVRQSGFASSVDDMTHLYDKIVSELEQQVHGLLGTVV
PSNPQVAALHVLHEAVLVARNSREAVTAMALLQKTVESMAEGLSHSLGADPETALRFREA
HLAVLKTLAEGYGHPWAAKHITRFLLELREEIRWNVDVVDPLLRSGLLVLATFDLHLAQS
MENGMNYPAVDFAKQLVRLYFSEGRHGDYNLSESDLCNTLETLVRINAHSRQPQEGLSQV
MEMLRSGSGGGAVEYGGVPSSGPMSMMHSGISQAREYDDPPGLHEKTEFLLREWVSMYNA
PSAGKDSTKAFQIFVQQMNVQGILKTDDLITRFFRLSTEMCVEHCYRALLEQTPSNATIV
RSKCFNSLDAYMRLIALLVKLSGDASNPTTKVNLLNKVLGIVAGVLLQDHESRGLEFQQL
PYHRIFMMLFLELSAPEPVLEAIGFHVLMAFCNTLHVLQPCKAPAFAYSWLELISHRVFL
GRVLALTPQQKAWGMFAQLLNDLFKFLAPFLRNVDLEKPIQLLYKGTLRVLLVLLHDFPE
FLCDYHYGFCDLIPANCIQMRNLILSAFPRHMRLPDPFTPNLKVEVLPEITQAPRVLTNF
ASVIQPQSFKKDLDSYIKTRGPVTFLSELRSNLQATTEPGINYNVPLMNALVLYVGTQAI
AYIQSKSLTPSMSTITHSSHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCT
LLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLVTFIDLIKNPTFKFWSHEFVRCAP
EIEKLFESVARSCMQQKPPTEPSG
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagatccgttgtcttttgctttgtcttatattagttactctgtgtccagcttg
acaaagaagaacttcaagtccagtgttcaagagatttctcgccttgtcgccctgcacggg
tttgaggcagagcggcatctgcttcgttgccttttttcccacgttgacttcagtggagat
ggtaaaagtagtggaaaagacttccatcagacccagtatttgattcaggaatttagctcc
attctttccaagcccaattttttgtcaagtgtgtgctttgctatagaaaatcctcttcat
caccaaaagagtcttcgaccaagccccttgctactggcccatatcagccgtgtgctaaga
ctgaaccgtgtgcaagaagttgttcttggcacttgtttgcttcattcctccagtacagag
ctctgcatttgtgctacacagtttattcgactcaagcttcccgaccttttacggtcgtac
acagattctgactcatccacacaggagggtgatcttcaggattgctctcctgaggttctt
caccttctgcttgtagagttattgaacaaaaattctgaacactttggtgttactaatgaa
ctgaaggagtctttctttgagaatctccgtaaagattttcctcaggatagagtgccggta
gttttagcaccactgctttacaacgaagcatctgatgtgctcatggtaaaaggaatgact
gagccagcttcaaacatgtcgaaaccaatggaactgtcacacgtagacctcatcaaagaa
gtcggctatggcttcactgcaagtgtggaggagtgtcgccagagcctcatccagatgggt
ctgcgggaccctgggccatgcatggtggccagagttctgtccatgatggccaacacccat
acaggcctttctgagccactccaaggcctggggccttcagcagcatctgcttggggggct
gacaaggatgccaacacaagccatgttacttggaacattgacattttcattcaggcactc
tatgacttggtaccgacactgaactggaaagaagtgattagtgaattggactttccaggc
ttctttgtgaaggatcgacaaggcctgaagatcctctggcatggcttgtgcagagggctg
ggcagtgaccctttccctacagaccgcttgtacagagtttggaggaacccagagtcccag
ctatcattgtttcatcagattatgaaaaattctgacattgtttgcctgactgactacaag
taccggcctgtgtcgatggagatcttgaaggcacttcctgaagatgacaacagggacatt
gctaattggaaatctttggatcttgtagagactctcctgacgttgtcagagaaagtgcag
tactcatcgcatgtacatgatttgttcaaatatcctgttcaacattgtcctgacttgctg
atgcttgggcttctacaaacttcagggcccatgcaaggttttcgtcaagaactcctgaca
aaccttgtgtttgtgtttctcagcaatcatccaaattctgcaatagtgctgcaggcagct
tggaatgttcagaaccacgccagtgtggttcggcccttgatcatgcacaccatggcggac
tggtacatgcgtggtggagagagcgagcaaggacgcctctctcgaattctagacgttgct
caagacctgaaggccctctctgtgctactgagcagcaactcttttcctctggtgattgac
ttggcttgcttggcctcacgcagagaatacctcaagcttgacaagtggctcaatgacaaa
atctttgagcacaaggaggcattcattcaagcctgtgtcaattttctgaagcgtaggtgt
ccccagattatgggtggcatagtcaaggaggagaatttgccaaaaagtgctcaactacca
actgaaacactggctactatgctgtcctgtctccagcagtatgcaggcagtgttagtcag
gaactttcggaaaccatcttgaccatgtcaggaaattgtagtattctgctgaacaagcca
cgccaaccaccaccaggtgtcgtcaaaacacctaggggcttggagccggcattttcagcg
gctagcctcaatccatctcaggctcctcagcagcaacaacagcaacaacagcagcagcaa
cagcagcaacagctggaagtccttagctccttgggaagcctgtccatgagtggcccagct
gcagcacaagccccaccgcttggtgtgggaggtggaccaccactatttggcagctcattt
gctacaccaggctcaccagccaagctttttggggcacctccaagtgcggctggttcagct
gggccaccacctcctgctcaaggaaccagcttttccaatgttgtgcccagccttggagat
gtagcaagcatcctgcctgaaatgaaccagcctgtgtcaaaagagattgaagatgaagct
aatggatattttcaacgaatttacaaccatcctccacatcccacattgtccattgctgaa
gttttggacatgctgaaacgtttccaagagtctcccatcaagtctgagagggatgtgttt
aactgcatgatcaagaacctgtttgaggagtacaggttctttccacagtatcccgaaaaa
gagctcattataacagcacaactatttggaggcatcattgaacagagtcttgtaacgtac
atggctctgggactggccctccgctatgtgctggatgctcttcgcaagccatttggcacg
aagatgtactactttggcatcactgcactggacaggttcaaaacaagattgaaagactac
ccgcagtattgccagcacctggcgtctattccacatttcaaggactttcctgaacacttg
aaagagtatgttgactgtggtgcgcggtctcaggagcccctgaatcgaccccagggccag
actttgccccacaatctggccatgttggctcagggactgaacccagcaacaacacctcaa
ggtccagccgtacgtgctgcacctgcagcagtgcctacatctagtgcaggtgtagcagct
acctcaggagtagttgccaagcccaccactgttgggggaaaggatgcatgtcccagcact
ccgccctgtccgtcattcgctggcattcatggcatcgatcacaagtactgcttgagacag
ctcgatccgaatgagaagcgggatacgccatccattgccaaccctacgaacatagatact
ttgctgggtgccactgagaaggatgataagctggtaataccaccagaagctgttcaagac
aaagtggcctttatcatcaacaacctttcccaggtgaaccttccccaaaagacagaggag
ttcaaggaggtggtgaaagaagaatattggccttggtttgcccagtacatggtgatgaag
cgagcatctattgaacccaatttccacacgctgtatgctaatttcctggacactgtcaag
ataggggagctttcaaagcttgtactgcgagaaacatttcgtaacataaaggttttattg
accagtgataaggcgctagccaatttttctgaccgatctctgttgaaaagcctaggccac
tggctgggaatgctaaccatggcaaaaaatagacctgttctgcaagttgacatggatgta
aagtccttactggttgaggcataccataaagggcaacaggaactgctttacgtggtgcca
tttattgccaaagtcctggaatcctgtgcaaaaagcagggttttcaagcctcccaatcct
tggaccatgggaatattggatgtgctgtcggagttgcaccgggagccagagttgaagttg
aacctgaagtttgagattgaggttttgtgcaagaccctaaacctagacatcaatgaccta
aagccaggtatgattctgaaggaccaagagcgtcgcaagcgactagacccgcagctctcg
cctcggcataaggtggatagccccccattgcccccctctgtggtggctccaacggcagcc
ccaccttctgctgcccctccaaccctggcgccccaaggaccttcgggggttgtaacagca
gcagcaggacctggagggcctgtagcacaggtggggttgccgccaccgcagcctgaggag
gcgccagcaacgttgggtgtatctgggccatcaatgtccgcattccctcaaccacagttt
tcgtaccatgatatcaatgtgctttctatgaccaacttagcccagcacatccagataaac
agccagcttccactctttcaggcacatcctcatttaaaacagtatgtgcgcacagccata
gatcgtgcgatccaggaatggataatgccagtggtggagcgctctctcaaaattgcactt
acaacatgtgatcagattgttcgaaaggactttgcattggatcctgaagagtccagattg
cgtgcagcagcccaccacatggtgcggagcctgacagctgggatggctatgattacttgt
cgagatccaatgttgatgaccatcagcaacaatctgaaagctgcctttcacactgcactg
aggcttcaaggagcaagccttccccaaaaggagcttttagaacaggcaaccacagtggtg
gctcaagagaatgtggaactcgcctgctgtttcatccagaagactgccatcgaaaaagcc
atccccgagattgacaaaaagcttagccaggaatacgagatccgcaagagtgctcgcagt
gaaggccggcgctactgtgaccctgtcgtcttgacataccaagctgagaggatgcctgaa
cagattcggctcaaggttggcggtgtgactccacagcaaatggcagtatatgaggaattt
gcacggaacatccctggattccaacctatttctgaaagagatcagccttccttgttcctt
ccaaagcctgtggtgcgacagagtggctttgcaagttctgtggatgacatgacacacttg
tatgacaagatagtttctgagctggagcagcaagttcatgggctcctaggtactgttgtg
ccctcaaacccacaagttgcagccctgcatgtgctgcatgaggcagtgctggtggcacgc
aactcaagggaagctgttacagccatggctctgcttcagaagacagtggagagtatggct
gaagggctgagccactcgctgggagcagaccccgagactgcgctgcgctttcgcgaggcc
cacctggcagtgctgaagacactggccgagggttacggtcacccatgggcagccaagcat
ataacacgcttccttctggagctgcgtgaggagattcgttggaatgtggatgtagtggac
cctctgcttcgatcaggcctgctggtgttggccacttttgaccttcatctggcccagtcc
atggagaatggcatgaactatccagcggttgactttgccaagcagctcgtgcgcttgtac
ttctctgaaggtcgtcatggtgactacaacctttcagagtcggacctgtgtaatacattg
gaaacacttgtgcgcatcaatgctcactcgaggcaaccacaagagggattatcccaagtg
atggagatgctacgtagtggaagtggcggaggcgcagtggagtacgggggtgtgcccagc
agtgggccgatgtcaatgatgcactcgggcatcagccaggcacgcgagtatgatgaccca
cctggcctgcatgagaagacagaatttctgctacgggagtgggtgtcaatgtacaatgcc
cccagtgctggcaaagactctaccaaagctttccagatatttgtacagcagatgaacgta
caaggcattttgaagactgatgacctgatcacccggttctttcgtctgagcacagagatg
tgtgtagagcactgttacagggccctcctggagcagacacccagcaatgcaacaattgtt
cgctcaaaatgtttcaactctcttgatgcatatatgcgcctgatagccctgctggtcaag
ctcagtggagatgcatccaacccaacaaccaaagtcaacctgctcaacaaggtgcttggc
atcgtggcaggtgtattacttcaggatcatgagtcgcggggtctggagttccaacagctt
ccttaccatcgcattttcatgatgcttttccttgagctgagtgcacctgaaccagtcctg
gaagccattggctttcatgtgcttatggccttctgcaacactctgcatgttctgcagcca
tgcaaagcgcctgcttttgcctactcttggctggagctcatctcgcatcgtgtgtttttg
ggccgtgtccttgccctgactccccaacagaaagcctggggtatgtttgcccagctgctg
aatgacttgttcaagtttctggctcctttccttcgcaatgtggaccttgagaagcctatc
cagcttctgtacaagggcacattgcgggtgctgctggtgctgctgcatgatttcccagag
tttctgtgcgattatcactatggtttctgcgacctgattcctgcaaactgcattcagatg
cgcaacttgatccttagtgcatttcctcgacatatgcgactgcctgatcctttcacgcca
aacctgaaggttgaagtactgccagaaatcacgcaagcccctagagttctcacgaacttc
gcttcagtcattcagcctcagagcttcaaaaaggatttggactcttatattaaaacacgg
ggtcctgtgacatttctgtctgaacttcggagcaatcttcaggcaacaaccgaacctggc
attaactacaatgtgccattgatgaatgcactggtgctctatgtgggcacccaagccatt
gcttacattcagagcaaaagcctgactcccagcatgagcacaattactcattcatcgcac
atggacatattccagaacttggctgttgacctggacaccgaaggacggtaccttttcttg
aatgcaattgcaaaccagctccggtacccgaacagtcatacccattacttcagctgcaca
ctgctgtacctgtttgctgaagccaacactgaagccatccaagaacaaataacaagggta
ttgctggagcgcctcattgtgaatcgtccacacccatggggtctcctggtaaccttcatt
gacctcatcaagaacccaacgttcaagttctggagccacgaattcgtgcgttgtgcgcca
gagattgaaaagctttttgagtctgtggcaagatcttgcatgcagcagaagccacccaca
gagccttctggttaa
DBGET
integrated database retrieval system
