Dermacentor albipictus (winter tick): 135913120
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Entry
135913120 CDS
T11267
Name
(RefSeq) TAR DNA-binding protein 43-like isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135913120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalb03019
]
135913120
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
135913120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
RL
Motif
Other DBs
NCBI-GeneID:
135913120
NCBI-ProteinID:
XP_065301874
LinkDB
All DBs
Position
2:complement(74794625..74828082)
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AA seq
495 aa
AA seq
DB search
MSCFIQVSEDESEEPIELPCEDDGTLLLTTLSAQFPATCGLKYRNPESGTMRGVRLVDGR
FHPPDNGWGNVVYYCVFPKDACLHNSENKRKSDEQLENSTAKTKRLENRQKCSDLIVLGL
PWKTSEQDLRQYFETFGEVLMAQVKKDPKTGQSKGFGFIRFSSYESQVRALSKRHLIDGR
WCDVKIPNSKVSAQDGQASELSRKVFVGRCTEDLSSDDLRDYFSKFGEVTDVFIPKPFRA
FAFVTFVDPDVAQSLCGEDHIIRGTSIHVSNAVPKSEAAPSSHHHALGPLAGGGGGAGGG
AGGRGPGTGPAHRGGPLDVGRPAGQGAAYATPGPFPGAHHLAPHGGWGHQAAGGAHRGAD
LPNLLGGSLGMGPLGAAQAQATQPQGVNTTPPTLGMGALNLGAATLPLSSAVVAALGQAA
GFGLFGGSFQGGAGDQGPGGPPPPNSGAGGSGSFLGWMGQGGAGQAGGSGDAGAGQGGPW
PQREGKQGFGMSVSP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagctgttttattcaagtttcagaggatgaaagtgaagaacccattgaacttccgtgt
gaagacgatggcacactgttattgacaacgctgtccgctcagttcccggccacatgcgga
ctcaaatatcgaaacccagagtctggaacgatgcgtggagtgcgtttggtcgacggccga
tttcacccgccagacaacggatggggcaatgttgtgtattactgtgttttccccaaagat
gcgtgcctgcacaactctgagaacaagcgcaagagcgacgagcagctggagaacagcaca
gccaaaaccaagcggctggagaaccggcagaaatgctccgatctgatagtgctgggccta
ccctggaagacctcggagcaggacctgcgccagtacttcgagacctttggggaggtcctc
atggcacaggtgaagaaggaccccaagacaggccagtcaaaaggctttggcttcatccgt
ttctccagctacgagtcccaggtgagggccctgtccaagcggcatctcatcgatggccgc
tggtgtgacgtcaagatcccaaactccaaagtgagtgctcaagacggccaggcatcagag
cttagccgcaaggtgttcgtgggccgctgcactgaggacctgagctcggatgacctacgt
gactacttctccaagttcggcgaggtgacggatgtgtttatccccaagccattccgtgcg
ttcgcttttgtcaccttcgtcgacccagacgtggcacaatcactgtgcggcgaggaccac
atcattcgcggcaccagcattcacgtcagcaacgcggtgccgaagagcgaggcggcacct
tcgtcgcaccaccacgctctggggccgctcgcaggtggcggcggcggggcaggtgggggc
gccgggggaaggggcccgggcactggccccgcccacaggggcgggcctctcgacgtgggc
cggcccgccggtcagggtgcagcatacgcgacaccagggccctttccgggcgcgcaccac
ttggcaccccacggtggctggggccatcaggcagccgggggagcacatcgtggcgctgac
ctgccaaacctccttggcggcagcctgggcatggggccccttggggccgcacaggcgcag
gccacgcaaccacagggtgtgaacaccacccctcccacactgggcatgggtgcgctcaac
ctgggcgctgcgacgttgcctctcagctctgccgtagtggcagccctagggcaggcggca
ggctttgggctcttcggggggtcgttccaggggggcgcaggagaccagggtcctgggggg
cccccaccgcctaactcgggtgccggcgggtcgggctccttcttgggctggatgggacaa
ggaggagccgggcaggcgggcggctccggtgatgccggggcgggccaaggtggaccctgg
ccccagcgcgagggcaagcagggcttcggcatgtccgtctccccctga
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