Dermacoccus abyssi: FV141_00835
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Entry
FV141_00835 CDS
T06197
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
day
Dermacoccus abyssi
Pathway
day03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
day00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FV141_00835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
day03400
]
FV141_00835
Enzymes [BR:
day01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FV141_00835
DNA repair and recombination proteins [BR:
day03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FV141_00835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QEH92245
LinkDB
All DBs
Position
complement(163678..164514)
Genome browser
AA seq
278 aa
AA seq
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MTTLPHPGTGEPFASPVPPGTGWPADPARPRTRVARSSDDVERLAASSCSLEQLDARVTV
CRACPRLVAWRESVARDKRAAFAGEPYWGRPVAAFGSTNPHGLIVGLAPAANGANRTGRM
FTGDRSGEWLFASLHRVGIASQPVSKHAGDALELDGVRITSPVHCAPPDNVPTSVEKATC
STWLVRELQLLEPGLRTVVTLGGIAWTQTLGVARRLGWEVPRPAPRFGHGAEVELRTAKG
RPIKLLGCYHVSQRNTQTGVLTEDMLDAVLARLHDPIL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgctgccccacccgggcaccggcgagccgttcgcctcccccgtgccgccgggc
acgggatggccggccgaccccgctcgaccgcgcacccgcgtcgcgcgcagttcggacgac
gtcgagcggctcgcagcgtcgtcgtgttccctggagcagctggacgcccgggtgacggtg
tgccgcgcctgcccgcggctcgtcgcatggcgcgaatcggtggcgcgcgacaagcgggca
gcgttcgcgggcgagccctactggggacggccggtggcggccttcggcagcaccaacccc
cacggcctgatcgtcggcctggccccggcagccaacggcgccaaccgcacgggccggatg
ttcaccggcgaccgcagcggcgagtggctcttcgcgagcctgcaccgggtgggcatcgca
tcgcagccggtgagcaaacacgccggtgacgcactggaactcgacggcgtccgcatcacc
tccccggtgcactgcgcgccgccggacaacgtaccgacgagcgtggagaaggccacctgt
tccacctggctcgtgcgtgagctgcagttgctcgagccggggttgcgcacggtcgtcacg
ctcggcggtatcgcgtggacgcagacgctcggcgtcgcgcggcgcctcggctgggaggtg
ccgcgccccgccccccgcttcggccacggcgccgaggtggagctacgcacggcgaaggga
cgcccgatcaagctgctcgggtgctaccacgtgagccagcgcaacacccagaccggagtg
ctcaccgaggacatgctcgacgcggtgctcgcgcggcttcacgacccgattctgtag
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