Dermacoccus abyssi: FV141_06620
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Entry
FV141_06620 CDS
T06197
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
day
Dermacoccus abyssi
Brite
KEGG Orthology (KO) [BR:
day00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
day03051
]
FV141_06620 (pafA)
Enzymes [BR:
day01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
FV141_06620 (pafA)
Proteasome [BR:
day03051
]
Prokaryotic proteasome
Bacterial regulatory particles
FV141_06620 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QEH93230
UniProt:
A0ABX5Z8L2
LinkDB
All DBs
Position
complement(1395254..1396627)
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AA seq
457 aa
AA seq
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MERRIYGLETEFGVTATTNGQRRLTPDEVSRALFRKVVAWGRSSNVFLDNGSRLYLDVGA
HPEYATAECDTLLDLVAHDRAGERILDDMTSEAQERLAEDGVEGSIYVFKNNTDSAGNSY
GCHENLLLERSTDMNRISEVLVAFLVSRQLITGAGKLLQRDGRTVFNLTQRAEHIWDGFS
SATTRSRPIINSRDEPHADSARFRRLHVIVGDSTMSDTTTLLKVGAAHLVLRLIEAGESF
PRMHLANQVKAIRDVSADPTGQAVIDLQGGTSMTALAMQRLFLERSKAFVEREGDPDPSV
ELVLDLWERALDAVETQDFSGVETEIEWAIKRRLLTDYATRHGLELDDPRMAQLDLTFHD
IRRGRGLFGMLEKAGRARRLVDDERIAAAVTTPPQTTRAKLRGDFVREARAAGRDFTVDW
VHLKLNDQAGRTIMCKDPFLAEDARVERLIDSLSTPL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaacgccgcatctacggcctcgagaccgagttcggggtcaccgcgaccacgaacggc
cagcgtcggctcacccctgacgaagtgagccgcgccctgttccgcaaggtcgtggcctgg
gggcgttcgagcaacgtcttcctcgacaacggctcacgcctctacctcgatgtcggtgcc
caccccgagtacgcgacggccgagtgcgacacgctgctcgacctcgtcgcccacgaccgc
gcgggtgagcgcatcctcgacgacatgacgagtgaggcgcaggagcgcctcgccgaggac
ggggtcgagggctcgatctacgtcttcaagaacaacaccgactccgcgggcaactcctac
ggctgccacgagaacctcctgctcgagcgcagcaccgacatgaaccgcatctcggaggtg
ctcgtcgcgttcctcgtctcgcgccagctcatcaccggcgccggcaagctcctgcagcgc
gacggccgcaccgtcttcaacctcacccaacgcgccgaacacatctgggacggcttctcg
agcgccacgacccgatcgcggcccatcatcaacagccgcgacgaaccgcacgccgactcg
gcacgcttccgccgcctccacgtcatcgtcggcgactcgacgatgagcgacacgacgacg
ctgctcaaggtcggcgccgcgcacctcgtcctgcgcctcatcgaggcgggggagtcgttc
ccgcgcatgcacctggccaaccaggtcaaggccatccgtgacgtctcggccgacccgacc
ggtcaggccgtcatcgacctccagggcggcacctccatgacggcgctcgcgatgcagcgg
ctgttcctcgagcgttcgaaggccttcgtcgagcgcgaaggcgaccccgacccgtccgtc
gagctcgtgctcgacctgtgggagcgcgccctggatgccgtcgaaactcaggacttctct
ggcgtcgagaccgagatcgagtgggccatcaagcgtcggctgctcaccgactacgccacg
cgccacggcctcgaactcgacgacccgcgcatggcccaactcgacctcacgttccacgac
atccgtcggggccgcggcctcttcggaatgctcgagaaggccgggcgcgcgcgtcgcctc
gtcgatgacgagcgcatcgccgccgccgtgacgacgccgccccagacgacgcgcgccaag
ctgcgcggcgacttcgtgcgcgaggcccgtgcggccgggcgcgacttcaccgtcgactgg
gtgcacctcaagctcaacgaccaggccgggcgcaccatcatgtgcaaggacccgttcctc
gccgaggacgcccgcgtcgagcgcctcatcgacagcctctccacgcctctctga
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