Drosophila arizonae: 108616519
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Entry
108616519 CDS
T05886
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
daz
Drosophila arizonae
Pathway
daz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108616519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108616519
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108616519
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108616519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_1st
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
DUF4327
NCU-G1
Mucin
Motif
Other DBs
NCBI-GeneID:
108616519
NCBI-ProteinID:
XP_017867245
UniProt:
A0ABM1PJ59
LinkDB
All DBs
Position
5
AA seq
2534 aa
AA seq
DB search
MNVENQLTPLKQIRNLVKHVNKRNFNESNEQIKQFIQDYALEADRSCLRYLFTVLNLNDP
SPNVTAQLQAKLLGAHLQRQLQCSSFVTNICFAFDQHFAKQKGLKPFALSELVGQVAKLT
GINKLCECIFALAVTHSSHPELRQSARENLRSSLPELLNSYLGNNSASAATASGLHEISF
DLLQYLLCCLREYVTPQLESQFLRKLREEFPREAVPLVLAPLLYRNTTTETTTTAAKSND
DDETDAEEETTNTNTTNTSSWSSSNADNLNEVGIEDIYDHLSEIIYSNQGKNNIMDTSWI
NLILEIGYDFTSSVEDCRNHLCCGCGSRELQPKDVAKIVGLMCRRHLSLLDCNVNLPTPA
NFWPGQQQAAGSSSSNASQSAQQQNSTSSNNNNDGSSESSSAASEKKDKKETTDATQTWK
PEVFVQALKELAPQLNWKEVCMELDHPEFVLKDRIGLDLLLTILRLSTQSKLFPQPECIY
RHWSNTEGQLSLITTMLQNPDLFSFADYVISQPALDVLKTPPDAEKKEIAAWKSLHLVEV
LLSIADKGYYSQVHELFKFPAQNCPDVLFLALLHINPPLTPLRQDLFNQLIPTFLGNHPN
SNVILASAWSSTNFQLRPSIMNAMSEWYLRGGEFDQVKLSRILDLAQDLKALSSLLNARS
FLFIIDLACLASRREYLKLEKWLSDKIRDHGEPFMQAMIKVLQRRCPQVTNSKLPEDQLP
PKQAQLLPETVTTMINCLQACINTCMQPETAEMIMQMAGNVAILANKARAAQQQQQQVPP
SLVPPPPSILRGHRGMDLPGGGIVPGSVPPPPQQQQQQQPFSGNLNAQQMFGPGGMDPLT
NMSNNLAGLNLGGPNGAFNFGNMLNNLVSTTPASPSRLMTAGANPYPPIPIQITAQPPPN
VGNLGRMLPAGPQPAPTPPNPNNPVMADLQMPVSKEVEDEANSYFQRIYNHQPNPTLSID
EVLDILQRFKESSHRREQEVFLCMLRNLFEEYRFFSHYPEKELQITAQLFGGIIDRNLVP
TFVALGLSLRCVLDALRKPEGSKLYYFGVTALDRFKTRLHTYNKYCEHIRSIPHFNDFPQ
HLIQYVEFGMHGQEPPPQKLIGLSNTIPSSAIAQGATEPLYRANSMPGNMPTAPNVQKPP
VVLAHAARMKSIANATNIDTLLVANQEEKITVPPEPIQDKTAFIFNNLSQLNIPQKCEEI
KEIMTKEYWPWLAQYLVLKRASMEFNFHTLYYNFLDALKNVEINRYVTKETLRNIKVLLR
SDKGVINFSDRSLLKNLGHWLGMMTLGRNRPILQLDLDLKSLLAEAYHKGQQELLFVVPF
VAKILESSAKSRIFKSPNPWTMGIMYVLGELHQEPDLKLNLKFEIEVLCKTLNLELEKLK
PVIYLKDPSRPLLIEQQMSQPKPKVVEAPPQQQQQQQQQQQQHPQQQQQPPQPPPSAEVD
AQAMMMSNANASGSVSSPNLPTDPSQVVLPPPEPRFSYLEVNVNNFQLIGQQLVMPNNIP
FLHANPGIKHIVVNAIERTITDWLQPVVDRSIRIACATTEQIIRKDFALDADENRMRTAA
HQMVRNLAAGMAMITGKDEIARAISQNLHKAFMAALTGVPSMSDIQAASMQLANENVELV
CAFIQKTSAEKSALEIDRRLSTDFETRKIAREEGSRFVDAQILSYQQERLPEPVRLKVGP
APPTLYAVYSEFARSIPGFQQMSDRDIALFVPKPQDLQPPNVFANDESSMVYAEVASKME
AFMNTAINVPTLQLQASKMHVLLNALMATRRLRDQESAFNLLTRAVEGLTEGLINVQDHM
EQMKLYRDIHLRILSLLHNSFGAPNTERAVTKCFFDIREEVRYNVEAARALITSHFVNLN
QFDGMLRDCIDNGNNYMAISFAIALLERLIMEDRVINVVSDNEFMATVEVLGRLSQQRHR
YPECIANAIETLWSGNLNTSDYGSFNPGERYPTGASHYIHSGMHHVRSSDMDDPPGLQEK
TEFLLKDWVALYTQQNQQTTRDARNFSAFVQKMNSYGILKTDDLITRFFRQATQICTDVV
YRMFGDPNLPINQAKNQIFQWIDAFVHLIAMLVRHSGEAGNPTTKINLLNKVLGIVLGTL
IKDHEMRGVGFQQVGYHRFFMMLFMELCSADSTLESLMHSIVSAFAYTYHLLNPSVAPGF
CFAWLELISHRVFLGRILVQIPGQKGWPLYSQLLQDLFKYLAPFLRNTELGKPVQLLYKG
TLRVLLVLLHDFPEFLCDYHFGFCDTIPPNCVQMRNIILSAFPRNMRLPDPFTPNLKVDM
LSDSSNAPKVCKSYINNIKPANFRNDLDSYLKARAPVTFLSELRGHLQVTTEPGTRYNMA
LMNALVMYVGTQAIALIRNKNFVPNTSNIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCAVLHLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
IYKFWDHDFVHCAPEITKLFESVARSCLAKSNVTQQLNMAIDGGAGGAGGGVGGGGGGGG
GAVVVDNQEVVNIN
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagagaaccaattgacgcctctaaagcagattcgtaatttggtcaaacacgtg
aataaacgaaattttaatgagagcaacgaacaaataaagcagtttatccaagattacgcc
ctcgaagcggatcgtagctgtctgcgatatctgttcacggtacttaacttgaacgatccg
tcgccgaacgtcaccgcacagctgcaggcgaagctcttgggcgcccatttgcagcggcaa
ctgcagtgctcctcgtttgtcacaaatatatgctttgccttcgatcaacattttgccaaa
caaaagggtctgaaaccatttgcactctctgagttggttggacaggttgccaagctaact
ggcattaacaagctttgtgagtgcatttttgcattagcggttacccacagctcgcatcca
gagctaaggcagagcgctcgagaaaatttgcgtagctctttgcctgaactgcttaattcg
tatttgggcaacaattcagcctcagcagcgactgctagtggtcttcacgaaatctctttt
gatttgttacaatatttgttgtgctgtttgcgggagtacgtcacacctcagctggagtca
cagtttttaaggaaactgcgcgaggagtttccacgtgaagcggtgccattggtcttagcg
ccacttttgtatcgcaacacgacaacagaaacgacgacgacggccgccaaatcgaacgac
gacgacgaaactgatgcagaggaggaaacgacgaacacgaacacgacgaacaccagcagc
tggagcagctcaaatgcagataatctgaatgaagttggcattgaggatatctatgaccat
ttatccgagataatatactcaaatcagggcaaaaataatattatggacacatcttggatt
aatttaatccttgaaatcggttatgactttacatcgagcgttgaagattgtagaaatcat
ttgtgttgcggctgtggatcacgcgaactgcagcccaaagatgttgccaaaattgttggc
ctcatgtgtaggcgacacttgtcgctgcttgattgcaatgtaaatttgccaacgccagcg
aacttctggccaggccaacagcaggccgcaggcagcagcagctccaatgcttcacaatca
gcacaacagcaaaattctaccagtagcaacaacaataacgatggcagcagcgaatcgagc
agcgcggccagcgagaaaaaagataagaaggagacaacagatgcaacacagacatggaag
ccagaggtgtttgtgcaagcgctcaaagagttggcgccacagctgaactggaaggaagtt
tgcatggagctcgaccatccagagtttgtgctaaaggatcgcatcggattggatttgctg
ttgaccattttgagattgtcgacgcaatcgaaactctttccgcaaccggaatgcatttat
cgtcactggtctaacacagagggtcaattgtcgttgataacgacaatgctgcagaatcca
gatctattctcattcgccgattacgtaatcagtcagccagcattggatgtgctaaagacg
ccacccgatgccgagaaaaaggagatagctgcatggaaatccctgcatttggttgaggtg
ttactgtcgattgcagacaagggctactacagtcaggtgcacgaactctttaagttccca
gcgcagaattgtccggacgtgctattcttggcactgctgcacataaatccacctttgaca
ccattgcggcaggatctattcaatcagctaatacccacatttctgggcaatcatcctaat
tcgaatgttatcttggccagcgcctggagttccaccaattttcagctgcggccaagtatc
atgaacgccatgtcagaatggtatttgcgtggcggcgaattcgatcaggtgaagctgtcg
cgtattcttgatttggcccaggacctaaaggcactgtcctcgctgctcaatgcacgctcg
tttctctttatcatcgacttggcatgtctggcatcgaggcgcgagtacttgaagctggag
aagtggctgagcgataagatacgcgatcatggtgaaccctttatgcaggcaatgatcaag
gtgctgcaacgccgttgcccgcaagtaacgaactccaagctgcccgaagatcaactgccg
cccaagcaggcgcaattgctgcccgaaacggtgaccacgatgatcaattgtctccaagcg
tgcatcaatacatgtatgcagccggagacagctgagatgattatgcaaatggctggcaat
gtggccatcctggcaaacaaagctcgtgccgcacagcagcaacaacaacaggtgccaccg
agtctggtgccacctccgccgagtattctgcgtggacaccgtggcatggatctgccgggt
ggaggcatcgtgcctggctcagtgccaccgccaccgcarcaacaacaacagcagcagccc
ttctcaggcaatctgaatgcccagcaaatgtttggcccgggcggaatggatcctttgaca
aacatgtccaacaatctggctggtctcaatctggggggtcctaacggcgccttcaacttc
ggcaatatgctgaacaacttggtttctactactccagcatctccatcgcgtctcatgacg
gccggcgccaacccctatccgccgatacccatacaaatcacagcgcaaccgccaccaaat
gttgggaatctgggacgtatgctgccagcgggaccgcagccagcgccgacgccaccaaat
ccgaataatccagtcatggccgatttgcagatgcccgtttccaaggaggtggaagatgag
gccaactcgtactttcagcgcatctataatcatcaaccgaatccgacgctttcgattgat
gaagtactcgacatactacaacgcttcaaggagtccagtcatagacgcgagcaagaggtt
ttcctttgcatgctgcgcaatctgttcgaggaatatcgcttcttctcccattatcccgag
aaggaactgcagataaccgctcaactcttcggcggcatcattgatcgcaatttggtgccc
acattcgtggcgcttggtctatcactccgatgcgttctggatgcattgcgcaaaccggaa
ggatcgaagctctactactttggtgtaacagcgcttgatcgattcaagacgcgtcttcac
acctacaacaaatactgtgaacacattcgctccataccgcatttcaacgactttcctcag
cacttgattcaatatgtcgaattcggcatgcatggccaggagccgccgccccagaagttg
attgggctgagcaatacaataccgtcgtcggctatagcacaaggagcaactgaaccgcta
tatcgtgccaattcaatgccaggcaacatgcccacagctccgaatgtacaaaagccgcct
gtggttctggcgcatgccgcgcgcatgaaatccattgcgaatgccacaaatatcgatacc
ctgctcgtagccaaccaggaggagaagattactgtgccgccagagcccatacaggacaag
acagccttcatcttcaacaatctcagccagctgaatataccgcaaaagtgcgaggagatc
aaagagatcatgaccaaagagtattggccatggctagcacaatatttggtgctcaaacgt
gcctcgatggagttcaactttcacacgctgtactacaactttttggatgccttgaagaat
gttgagattaatcgctatgtgaccaaggagacgttgcgtaacatcaaggtactgctacgc
tctgataagggtgtgatcaatttttcggatcgcagtctgctcaagaatctcggccattgg
ctgggcatgatgacacttggtcgcaatcgtcccatattacaattggatttggatttgaag
tccctgctggccgaggcgtatcacaagggtcagcaggagctgctgtttgtggtgccattc
gtggcaaagatcttggaatcatctgccaaatcgcgcatattcaaatctcccaatccctgg
acaatgggcataatgtatgtattgggtgaattgcatcaggagccggatctcaagctcaat
ctcaagttcgaaattgaagttttgtgcaaaacactgaatttggaactggagaagctcaaa
cctgttatctacctgaaggatccatcgcgtccgctgttgatcgaacagcaaatgtcgcag
cccaagccaaaggttgttgaggcaccacctcaacaacaacagcagcaacagcagcaacaa
cagcaacatccacagcagcagcaacaaccaccgcagccaccgccatcagctgaggttgat
gcacaggccatgatgatgtccaatgcgaatgcatctggctcggtgtcgtcacctaacttg
ccaacagatcccagccaggtggtcttgcccccgccagagccacgtttctcctatctggag
gtgaatgtcaacaatttccaattgattggccagcagctggtgatgcccaacaatattcca
ttcctgcacgccaatccaggcatcaagcacatcgttgtcaatgccatcgagcgcacaatt
accgattggctgcagccggtggtggatcgtagcatacgcattgcatgcgccacaactgaa
cagatcatacgtaaggatttcgctctggatgcggatgagaatcgtatgcgcactgccgcc
catcagatggtgcgcaatctggccgccggtatggccatgattactggaaaggacgagatc
gcacgggcgattagccagaacttgcacaaagcgttcatggccgcgttgacgggtgtgccg
agcatgtccgacatacaggctgcatcgatgcagctggccaacgagaatgtcgaattggtc
tgtgcatttatacaaaagacatcggctgagaagtcggcactcgagatcgatcgacgactg
tcgaccgactttgagacgaggaaaatagcacgcgaagagggcagccgatttgtcgatgcg
caaatcttgagctatcaacaggagcgtttgccggagccagtgcgtcttaaggtgggccca
gccccacccacactgtacgccgtctattcagagttcgcgcgcagcattcctggcttccag
cagatgagcgatcgcgatattgctctgttcgtgccgaagccacaggatctgcagccaccg
aatgtatttgccaacgatgagagcagcatggtctatgccgaggtggccagcaaaatggaa
gcgttcatgaatacggccatcaatgtgccgacgctccagctgcaggcgagcaagatgcat
gtcctgctgaatgccctgatggccacgcgacgcttgcgtgatcaggagtcggcattcaat
ctgctgacacgtgccgtggagggtctgaccgagggcctgatcaacgtccaggatcacatg
gaacaaatgaaactttatcgtgacattcacttgcgcattctgagtttgttacacaacagc
tttggagcacccaatacggagcgtgcggtaaccaaatgcttctttgatatccgtgaagag
gtgcgctacaatgtggaagctgcacgcgcgctgatcacctcacatttcgtgaatctgaat
cagttcgatggcatgttgcgcgactgtatcgacaatggcaacaactatatggccatctcg
tttgccattgcactgctcgagcgtctcatcatggaggatcgtgtcataaacgttgtctcc
gacaatgagttcatggccacagttgaggtgcttggacgtctgtcacagcagcgtcatcgc
tatcccgaatgcatcgcgaatgccattgagaccttatggtcgggcaatctgaacacaagt
gattatggctcgttcaatccgggagaacgctatccgaccggcgcatcgcattacatacac
tctggcatgcaccatgtccggtcatcggatatggatgatccgccaggcctgcaggaaaaa
accgaatttttgctcaaagattgggtcgctctgtacactcaacagaatcagcagacaaca
cgagatgcacgcaacttcagcgccttcgtgcagaagatgaacagctatggcatcctcaag
acagacgatttgattacccgcttcttccggcaggcaacacagatctgcaccgacgttgtc
taccgcatgttcggcgatcccaatttgcccatcaatcaggcgaagaaccagatattccaa
tggatcgatgcctttgtacatttgatcgctatgctggttaggcattcgggcgaggctggc
aatccgacgacaaagatcaatttgctcaataaggtgctgggcattgtgctgggcactttg
atcaaggatcatgagatgcgcggcgttggcttccagcaagtgggctatcaccgcttcttc
atgatgctgttcatggagctgtgctctgcggacagcacactggaatcgctgatgcacagc
attgtgtcggcctttgcctacacatatcatctgctcaatccaagcgtggcgcccggcttc
tgttttgcctggcttgagttaatctcacatcgcgtcttccttggccgcatcctggtccag
atacctggccaaaagggctggccattatattcacagctattgcaggatctcttcaaatat
ctcgcaccattcttgcgcaacaccgagctgggcaagcccgtacaattgctctacaagggc
acgctgcgtgtcctgctcgtgctgttgcacgatttcccggaattcctatgcgattatcac
tttggtttctgtgacacaattcccccaaattgtgttcagatgcgtaacattatattgtcc
gcatttccacgcaatatgcgtctgccggatccgtttacgcccaatctgaaagtcgacatg
ctctcggacagcagcaatgcaccgaaagtgtgcaaaagctatatcaacaatataaagcca
gccaatttccgtaacgatctcgattcgtatttaaaggcacgcgcccctgtcactttccta
tcagagctacgcggccatttgcaggtaaccacagagccgggcacacgttacaatatggcc
ctgatgaatgcgttggtcatgtatgttggcacccaggccattgcactgatcagaaacaag
aacttcgtaccaaacacctcgaacatagcgcacagcgctcacatggacatcttccagaac
ctggctgtcgatctagatacagagggtcgttatctgttcctcaatgcgatcgccaatcag
ttgcgctatccgaatagccacacacactatttcagctgtgcagtcttgcatttgtttgcc
gaggccaattcggaggccatacaggagcagataacgcgtgttctactcgaacgtctgatt
gtaaatcgtccacatccatggggcctattgatcacattcattgaactgatcaagaatccg
atctataagttctgggatcacgatttcgtgcactgtgcacccgagataacaaaactcttt
gaatcagtcgcccgctcctgcttggccaaatcgaatgttacccaacagttgaacatggcc
attgatggtggagcaggcggagctggtggtggagttggcggcggcggcggcggaggtggc
ggcgccgttgtcgtagacaaccaggaggtggtcaacattaactga
DBGET
integrated database retrieval system
