Drosophila arizonae: 108617262
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Entry
108617262 CDS
T05886
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
daz
Drosophila arizonae
Pathway
daz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108617262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108617262
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
108617262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_1
TPR_8
TPR_14
TPR_12
TPR_19
TPR_17
TPR_9
TPR_6
TPR_11
TPR_CcmH_CycH
TPR_7
ARM_TT21_C
LETM1_RBD
TOM20_plant
TPR_Slam
Stealth_CR4
Motif
Other DBs
NCBI-GeneID:
108617262
NCBI-ProteinID:
XP_017868476
UniProt:
A0ABM1PMP0
LinkDB
All DBs
Position
5
AA seq
1235 aa
AA seq
DB search
MISTMSTKESKALIKDIRETIKMAKYGDAIHKCQRLLKSDPKNYMGYLLLGAAYQNIDKV
EAAKFLRKSIEYTEGPATVALQGLANCAPAEELPQIYEQLMELLPEKCLEYYEKLYALAA
DAALTKSCLDIFKKKAQNPNDSHINKILEYLGRLWFTSEMEVPAAEIELYKMSMDKLLSV
GDADLQSMVYKRYLKFLYKQQDYVSCMRHACNMTESHPRDVYAYEWICMMHCENHEKVNN
KAWQSELRRSVSEYAAQLLQLNPKSNLALLVQALELYSKEQFVAARQLALQALEYQPSYR
MTQQLLARIHMKLGAHKLALLLWQELGEQHEEYAQCLSYKMDAKLLEEASKLLKDKAATD
ELSLKALARCYYKLGEVEKLKSLPLDAVTHAEFLLPPSEALEALANNESFEALLLRGKLN
MKLQNFAEALNCMLKATRLQPHIAECFEHLGHLYQANDDILRARKCFEKCVSLNALAEEA
VDALSSIYQQLGEEDLNEALLLNTLRHLSSDDAIRLQYKLGLHFLKVKKLDNAIQCFRLA
IKHDYKCMVYWESLGDAYAARGSYNSAIRVFQKILELSPNNSYAQLQIALIKTTIRMYPE
AIADFDELLKQYPDYLPALKGAAEAHISLAHNLKSQNLYGRAKDNFQMALEHLQSAFLQS
KAQCMVWLWRLTASVLVQTAQLPKSLANLDVAGNLAKREEKIVYLSRKDLLQLAQRFYLC
ALKLKQNTFLWYELALCSYYSAVYMPEDAKSHLELAAKVCKMAIKAQSNRWQNWNLLGVI
NMHAANENFPVAQHCLIQAVVTERKSYTAWTNLGVLYFKLGDIRLANEAFKRAQQSSPIY
PNAWIGQALVAEIIGEQEEAFDLFRHCQQFEYHPEAAIGYAHWVCRVLSDPVLRDKPHNK
HAIEHMHADIYALDAINWFVQNEESEACIASLTFQGFLFARQKLYKQAINSFTRACQQAQ
PGTDRDNLYTNLGYLYLKLGQPEQAVCAFDNVAHASFKPISGLALAYYRCGQSHESYATY
SNLLASGMAQDEEKAATILVAMASLVYASQGDTDTKTLLYQCILLKGAPIQALFSAFALG
VLHRDNELIKIIIPELQKYQFNEKYSTDVSYLTANYCLINEGPRQALNYLQQRVRMFPQN
PAVRKIFVKFLLDYFPNDATYEKALANMALITLKLKPSFLSDSNNANELSETTIYASRAL
ERVDRTQSLKLIQSAIRMNPINQQARQLLRSITAC
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgatatccacaatgagtaccaaggaatcaaaagccctaatcaaggacatacgggaaaca
attaaaatggccaaatatggagacgccatacataaatgccaacgtctactcaagagcgat
ccaaagaattatatgggttacttgttgctgggcgctgcctaccagaatattgacaaagta
gaggcggccaaatttctccgcaagtccattgagtataccgaaggacccgccacagtcgcg
ttgcaaggactggcgaattgtgcgcccgcagaggagctgccacaaatttacgagcagctc
atggagctattgccagagaaatgcttggaatactatgaaaagctctacgccttggcggcg
gatgctgcgttgactaaatcatgccttgacattttcaagaagaaggcacagaatccgaat
gatagccatatcaataagatcctagagtatctgggcagattatggtttaccagcgaaatg
gaggtgccagccgcagaaatagaactctacaagatgagcatggacaaactgttgtcagtg
ggcgatgccgatctacagagcatggtctacaagcgttatctgaagttcctctacaagcag
caggactatgttagctgcatgcgccacgcttgcaatatgactgaatcacatccacgcgat
gtctatgcctatgaatggatctgtatgatgcactgcgagaatcatgagaaggtgaacaat
aaagcttggcaaagcgaactgcgtcgctctgtttcagaatatgccgcacagctgctgcaa
ctcaatcccaaatcaaatttagccctgcttgttcaggctttagagttgtattcaaaagag
cagttcgttgcggctcgacaattggctttgcaagctctggaataccaaccaagctacagg
atgactcaacagcttctggctaggattcacatgaaattgggagctcataaattagcgctg
ttgctgtggcaggagctgggcgagcagcatgaagagtatgctcagtgtttgtcctataaa
atggatgccaaactattggaggaggcgtctaagctgctgaaggataaagcagcaacagat
gaacttagcttgaaggctctagcacggtgctattataaactgggagaagtggaaaagttg
aagtccttgccattagatgcagttacacacgctgaatttctacttccgccatcggaagct
cttgaagccctagccaacaatgaatcattcgaagcgctgctgctgcgtggcaagctgaat
atgaagctgcaaaatttcgccgaggcgctgaactgcatgctgaaggctacacgactacag
ccccacatagctgaatgcttcgagcacttggggcacttgtatcaagcgaatgatgatatt
ttacgagcgcgtaaatgttttgagaagtgcgttagtctgaatgctttggccgaagaggct
gtggatgccttaagctcaatctatcagcagttgggcgaagaggatctaaatgaagcactg
ttgctcaataccttacgccacttgagcagtgatgatgccattcgcttgcagtacaaactg
ggattgcactttttgaaagtgaaaaaactggataatgctattcaatgctttcgtcttgct
attaagcacgactataaatgcatggtctattgggaatccctgggcgatgcatacgcagca
cgcggctcttacaactcagcaattcgtgtctttcaaaaaattctcgagctttcgcccaac
aacagttacgctcaactgcaaatagctctgattaaaacgaccattcgcatgtatccagag
gcaattgctgactttgatgagctactcaaacagtacccagattatttgcctgctttgaaa
ggcgctgcagaggcgcatataagtcttgcccacaatctaaagagtcaaaatctgtatgga
cgtgccaaggataacttccaaatggctttggagcatctgcagagtgccttcttgcaaagc
aaggctcagtgcatggtttggctttggcgactcactgcgagtgttttggtgcaaacagct
cagttacctaaatccttagctaatttggatgttgctggcaatttggcgaagcgagaggag
aaaattgtgtatctatcacgcaaagatctactgcagctggcgcaaagattttacttgtgc
gccttaaaactgaagcaaaacacattcttgtggtatgagttggccttatgcagctactat
agcgccgtctacatgccagaggatgcgaagagtcatctggagttagctgccaaggtgtgc
aagatggccatcaaggcgcagagcaatcgctggcagaactggaatttgttgggtgtgatc
aatatgcacgcagccaatgagaattttcctgtggctcaacattgtttgatccaagctgtt
gtgactgaacgaaaatcctatacagcttggacaaatctcggcgtattgtattttaagcta
ggcgatataagattagctaacgaggcctttaagcgtgcccagcaatcgagtccgatttat
ccgaatgcttggataggacaggctttggtagctgaaataattggcgagcaggaggaggct
ttcgatttatttcggcattgccagcagttcgaatatcatccagaagcagctattggttat
gcccattgggtttgccgtgtgctctccgatccggtgctgcgcgataagccgcacaacaag
catgcaatagagcatatgcatgcggatatatatgccttggatgccatcaattggtttgtg
cagaatgaggagtcggaggcctgcattgcgtcgcttacatttcagggctttcttttcgca
cgccaaaagctctacaagcaggcaattaattcatttacacgcgcctgccagcaagcgcag
cccggcacagaccgagataatctttatacgaatctagggtatctttacttgaagctcggt
cagccggagcaggcagtctgcgcctttgacaatgtagcgcatgcttcctttaagcccata
tctggactggctttggcctattatcgctgtggacaatctcatgaatcgtatgcaacatac
tccaacctgttggccagcggcatggcgcaggatgaagaaaaggcagccactatattggtt
gccatggcctccctagtatatgcctcgcaaggcgatacggataccaaaacactgctttat
caatgcatacttctcaaaggtgctcccattcaagccttattctcggcctttgctttgggt
gtgttgcatcgggataatgagctgattaagatcattattccagagctacagaagtatcaa
ttcaatgagaagtactcgactgatgtgtcctacctaactgctaattactgcttaattaat
gagggccctcgtcaggctttgaactatcttcaacaacgcgtgcgtatgtttcctcaaaat
cctgcggtacgcaaaatttttgtcaaatttctgctggactatttcccgaacgatgcgact
tatgaaaaagccttagctaatatggctttgattacgctgaaattaaagcccagcttcttg
agtgacagcaacaatgccaatgagctatcagagacaaccatctatgccagccgagctctg
gaacgtgtggataggactcaatccctcaagcttattcaaagcgccatacgcatgaatcca
atcaatcagcaagccaggcagctgctacgcagtataactgcgtgctag
DBGET
integrated database retrieval system
