Desulfomicrobium baculatum: Dbac_0096
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Entry
Dbac_0096 CDS
T00963
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dba
Desulfomicrobium baculatum
Pathway
dba03030
DNA replication
dba03430
Mismatch repair
dba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dbac_0096
03430 Mismatch repair
Dbac_0096
03440 Homologous recombination
Dbac_0096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dba03032
]
Dbac_0096
03400 DNA repair and recombination proteins [BR:
dba03400
]
Dbac_0096
Enzymes [BR:
dba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dbac_0096
DNA replication proteins [BR:
dba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dbac_0096
DNA repair and recombination proteins [BR:
dba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dbac_0096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Corona_5a
Motif
Other DBs
NCBI-ProteinID:
ACU88225
UniProt:
C7LSL1
LinkDB
All DBs
Position
114099..117554
Genome browser
AA seq
1151 aa
AA seq
DB search
MSGFTHLHCHSEYSLLDGAIRLKDLCARAVDFGFSSAAITDHGNLFGSVPFYLEAKKHGI
KPIIGSEVYIADDMFERENKKRFHLVLLAQNLIGYHNLVKIVSAGFLEGFYYKPRVDKKY
LRAHSEGLICLSACLQGEVPYALRHGTFDSALLKAREYMEIFPDRFYLELQSNGLKEQEV
VNDRLMELANETGLPLVATNDCHYLGKDDYEAHDILLCVGTGKIASEKQRLKFDTNEFYY
KAPEEMEAAFAHCPEAVENAGRIADMCEVELKLKQHFFPVYDVPEGVTLDQEFRRLSEEG
LKERIAALPYEVDESVYRERLELELGVIIEKGFPAYFLIVQDFINWAKSKNIPVGPGRGS
AAGSLVSYALRITDLDPIRYALFFERFLNVERASMPDIDVDFCYNRRDEVIKYVSEKYGA
DHVAQIVAFGTMKAKGAIRDVARALDVSLKDADRIAKLIPDDLKMTLTKALDEEPELRNL
IDSDPQYKKLYDVARRLEGLARHSSIHAAGIVISQKPMVEYLPLHKGKNGEVVTQLDMKK
VELIGLIKFDFLGLKTLTVIDDALKLIRKNNKPVPILEKLPLDDPQTFELLCRGETDGVF
QLESDGMRRVLRGLKPSCFEDIIALLALYRPGPLESGMVDDFIGRKHGLRKVEYEFEELA
PVVHPILEDTYGVILYQEQVMKIASDLAKYSLGEGDNLRRAMGKKDPAEMAKQRVRFLDG
ARENNISQEAAEYIFDLMEKFAGYGFNKSHSAAYAVISYQTAYVKAHYPAEFMAAIITSE
VSNTDKILAHVSACRDMDIEVLPPDVNRSFNEFTVEGESIRYGLSGIKGVGEGAVESIEE
EREKGGDFTSLLDFCQRVNLRKVNKRVLDSLIKSGAMDSFGCSRRALLENLDKVQAMAQK
RAKRKTSGQLSFMGMVEENTCNLTGLGIEDDEAALPEFGDDEKCRMEKEAFGFFLIGHPL
QPFRQEIRRLGYPSLAQCADLTEKSPVQVPVLVTSMKTINTKKGDRMAFCGIEDLSGSGE
AIVFSEPYVTYRELLTCEEPLLMTGVVAKREMNGEESEDGPKKSKILAESFKLLSEVVGS
GTEPVVLFVRANGKDPDWIGLGEIVKRYPGQAPVQVDLARGEYVCRLQFGPDFMVAPCPD
FWRDFEQWRQI
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttttacccatctgcattgccattccgagtacagtcttctggacggcgccatt
cgcctcaaagacctgtgcgcccgggccgttgatttcggcttttcatcggccgccatcacc
gaccatggcaatctcttcggctccgtacccttctaccttgaggccaagaagcacggcata
aaacccatcatcggcagcgaggtctacatcgccgacgatatgttcgagcgggaaaacaaa
aagcgctttcaccttgttcttctggcccagaatctgatcggctatcacaatctggtcaag
atcgtgtccgccggtttcctggaagggttttattacaagccccgggtggacaagaaatac
ctgcgcgcccatagcgagggccttatctgcctgtcggcctgcctgcagggcgaagtgccc
tatgccttgcgccacgggaccttcgacagcgcccttttgaaggcccgcgaatacatggag
atttttccggaccggttttatctggagctgcagtccaacggtctcaaagaacaggaagtg
gtcaacgacaggctcatggaactggccaacgagaccgggctgccgctggtcgccaccaac
gattgccactacttgggcaaggacgactacgaggcccacgacatcctcctgtgcgtaggc
acaggcaagatcgcctcggaaaagcagcgtctcaaattcgacaccaacgaattctactac
aaggccccggaagagatggaggccgcctttgcccattgccccgaggccgtggagaacgcg
ggccgcatcgccgacatgtgcgaggtggaactaaagctcaagcagcatttctttccggtc
tacgacgtgcccgagggcgtgaccctggaccaggaattccgccgcctgtccgaagagggg
ctgaaggagcgcatcgcggccctgccttacgaggtggacgagtccgtttaccgcgagcgt
cttgaactcgaacttggcgtcatcatcgaaaagggctttccagcctatttcctgatcgtg
caggactttatcaactgggcgaaatcaaagaatatcccagtcggcccaggccgtgggtcg
gcggccgggtcgctggtctcgtacgcactcaggatcacggatctggaccccattcgctac
gcgctcttcttcgagcggtttttgaatgtggagcgtgcgtccatgcctgatatcgacgtg
gacttctgctataaccgccgcgacgaggtcatcaaatacgtctcggaaaaatacggggcc
gaccatgtggcccagattgtggccttcgggaccatgaaggccaagggcgccatccgcgac
gtggccagggcgctcgatgtcagcctcaaggacgccgatcgcatcgccaagctcattccc
gacgacctgaagatgaccctgaccaaggccctggacgaagagccggagctgaggaatctc
atcgacagcgatccgcagtacaagaagctctacgacgtggcccggcgcctggagggcctg
gcccggcattcgtccatccacgccgccggcatcgtcatctcccagaagcccatggtcgag
tacctgcccctgcacaagggcaagaacggggaggtcgtgacccagctggacatgaagaag
gtcgagctgatcggcctcatcaagttcgactttctgggccttaaaaccctgaccgtcatc
gacgacgccctgaagctcatccgcaagaacaacaagcccgtgccgatcttggaaaagctg
cctctcgacgacccgcagactttcgagctcctctgccggggcgagacggacggcgtgttc
cagctggaatccgacggcatgcgccgggtgctgcgcggcctcaagccttcctgcttcgag
gacatcatcgcgcttctggccctgtaccgcccggggccgctggaatccggcatggtcgac
gacttcatcggccgtaagcacggcctgcgcaaggtcgagtacgaattcgaggaactggcc
ccggtggtccaccccattctggaggatacctacggggtcatcctataccaggaacaggtc
atgaagatcgcctcggacctggccaagtattctctgggcgagggcgacaacctgcgccgg
gccatgggcaagaaggacccggcggagatggccaagcagcgggtgcgctttctggacggc
gcgcgcgagaacaacatttcccaggaggccgccgagtacatcttcgacctcatggaaaaa
ttcgcgggctacgggttcaacaaatcccacagcgcggcctacgcggtcatctcctaccag
accgcctacgtgaaggcccattacccggccgagttcatggccgccatcatcacctcggag
gtgtccaacaccgacaagatcctggcccatgtcagcgcctgccgggacatggacatcgaa
gtcctgcccccggacgtgaacaggagcttcaacgagttcaccgtcgagggcgagtccatt
cgctacggtctgtccggcatcaagggcgtgggcgagggggctgtcgagtccatcgaggag
gaacgggagaagggcggggatttcaccagcctgcttgatttctgccagcgcgtgaatctg
cgcaaggtcaacaagcgggtgctcgactccctcatcaagtccggggccatggacagcttc
ggatgctcgcgcagggcgctgctggaaaacctcgacaaggtccaggccatggcccagaag
cgggccaagcgcaaaacctccggccaactctcgttcatgggcatggtggaagagaacacc
tgcaaccttacggggctgggcatcgaggacgacgaggccgcgctgccggaattcggggat
gacgagaaatgccgcatggagaaggaggctttcggattcttcctcatcggccatccgttg
cagcctttccgccaggagatcaggcggctcggctatccgtccctggcgcagtgcgcggac
ctgacggagaagtcgccggtgcaggtgcctgtcctggtcacgtcgatgaagaccatcaac
accaagaagggcgatcgtatggccttttgcggcatcgaggacctgagcggttcgggcgag
gccattgttttttcggagccgtacgtgacctaccgcgagctcttgacctgcgaggagccg
ctgctcatgaccggcgtggtggccaagcgcgagatgaacggcgaggagagcgaggacggg
cccaaaaagtccaagattctggccgagtccttcaagctgctctcggaggtggtcgggtcg
ggcacggagccggtggtcctttttgtgcgcgccaacggaaaggaccctgactggatcggg
ctgggggagatcgtcaagcggtatccgggacaggccccggtgcaggtcgatcttgctcgc
ggggaatacgtgtgccgactgcagttcgggccggacttcatggttgcgccgtgcccggat
ttctggcgggattttgaacagtggcgacagatctga
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