Dermochelys coriacea (leatherback sea turtle): 119841382
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Entry
119841382 CDS
T09064
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119841382 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119841382 (CNOT1)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119841382 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119841382 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
119841382
NCBI-ProteinID:
XP_038224687
LinkDB
All DBs
Position
12:complement(4516324..4615161)
Genome browser
AA seq
2384 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTEGIPLQSISAPGSGIWSDGKDKSDGTQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQLRDSKGLQIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINSSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SLGGSAVPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTAFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTPTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLL
VATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRV
SIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWL
GMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWT
MAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAP
KKDVKQPEELPPITATTASTTPATNTTCTASVPPQPQYSYHDINVYSLGGLAPHITLNPT
IPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRV
AAHHMMRNLTAGMAMITCREPLMMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDN
CELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRL
KVGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTEL
EQHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADAD
LLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVTM
QQYDLHLAQSMENGLNYMAVAFAMQLVRILLVDERSVAHVTEADLFHTIETLMRINAHSR
GNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREW
VNLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYR
AQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVG
VLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAP
GFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILY
KGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKV
DMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNI
QLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIAN
QLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKN
PAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcagtttctgatccaggagtgtgcgtcg
ctgattacaaagccaaactttatctcgacgctgtcctacgccattgacaatccattgcac
tatcagaagagtctaaagccttcaccccatttatttgcccagctgagtaaagttatcaaa
ttaagcaaagttcaagaggtgatttttggtcttgctttactgaactccttcagctcagat
ctacgaggttttgctgcccagttcatcaaacagaaacttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcacctcctcctgtcccatctcctttttgggcagaagggagcctttggggttggacag
gaacagattgacgctttcctgaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacatcctaatggataggatcctg
cctgattctggagggatagccaaaacaatgatggagagctctctggcagacttcatgcaa
gaagtaggctacggcttttgtacaagtgttgaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgccagggttttgggaatgatggctcgaact
cattcggggttgacggagggtattccattacaatctatttcggctcctggcagtgggatc
tggagtgatgggaaagataaaagtgatggaacgcaagcccatacctggaatgtggaggtc
ttgattgatgttcttaaagagctgaatcctagtttgaacttcaaggaagtaacctatgaa
ctggaccaccctgggtttcaacttcgtgacagcaagggtctgcagattgtggtgtatggt
atccaaagagggctaggcatggaagtcttcccagttgatctcatttacagaccttggaaa
catgctgagggccagctctccttcatccagcattcccttataaacccggagatcttctgt
tttgctgactacccctgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcctggatttgattgagtctctgttgcggttg
gcagaagtggggcagtatgagcaagttaagcagctcttcagtttccctatcaagcactgc
ccagatatgttggtattggccttattacagatcaacagttcctggcataccttgcgccat
gaactcatctctacacttatgccaatttttcttggtaaccatcccaactctgccatcatt
ttgcactatgcgtggcatggacagggccagtctccttcaatacgccaacttatcatgcat
gcaatggctgaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
ctcgatgttgcccaagacttgaaggctttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgtatgaccttctta
aagagacgatgcccatctattttggggggccttgccccagagaaagaccagcccaaaagt
gctcagcttcctccagaaacactggcaactatgttggcctgcctacaagcttgtgctggg
agtgtttctcaggagctgtcagagaccatcctcactatggtagccaattgcagtaatgtc
atgaacaaggctagacagccaccacctggagtcatgccaaagggacgtccaccaagtgct
agcagcttggatgccatctctcctgtacagattgacccgcttgctgggatggcatctctt
agtttaggtggttcagctgttccacatacccagagtatgcaaggcttccctccaaatttg
ggttctgctttcagtacacctcagtcaccagcaaaagcatttcctcccctttctacccaa
aatcagacaactgctttcagtggcattggaggactctcttcacaacttccagtaggtggt
cttactacgggtagcctaactggtatagggactggggcccttggcctccctgcagtgaac
aacgatccattcgtgcaaaggaaactgagtacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggcaaatcagcacttt
agtaaagaaatagatgatgaggcaaacagctactttcagcgcatttataatcatccacca
caccccaccatgtctgtagatgaggtattagaaatgctacagaggtttaaggactccaac
attaagcgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggagtaccgt
tttttcccccaatacccagacaaagagctgcacataacagcctgcctctttggtgggata
atagaaaaaggactggttacttacatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttccctcatcacctacaggagtacattgaatatgggcagcaatcccgagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggctcaggttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctccaccacccccaccactgtggcaaaaaccatcacaatcacacgaccaactggt
gtcagcttcaaaaaggatgtgccgccctccattaatacgaccaacatagataccttgcta
gtggcaacggatcagactgagagaattgtggagcccccagaaaatgttcaggaaaaaatt
gctttcatcttcaataatctgtctcaatcaaatatgacacagaaggttgaggagctgaag
gaaactgtgaaagaagagttcatgccttgggtttcacagtatcttgtgatgaaaagagtc
agtattgagccaaattttcacagcctgtattcaaatttccttgacactcttaagaatcca
gagtttaacaagatggtcctgaatgaaacctacagaaatatcaaggtgctactgacatca
gataaagctgcagccaacttctctgaccgttcccttctgaagaaccttggccattggttg
ggaatgatcacactggctaaaaataaacccatcttgcacacggatttggatgtgaaatca
ttacttctggaggcttatgttaaggggcaacaggagttgctttatgtagtgccatttgtt
gccaaagtcttagaatctagtgtcaggagtgtggttttcaggcctccaaacccctggacg
atggcaatcatgaacgttttagctgagctgcatcaagaacatgacttaaaactaaatctg
aaatttgagattgaggtgctctgcaagaaccttgcactagacatcaatgagctgaaacct
ggaaacctcctgaaagacaaggatcggttgaaaaatttggatgaacagctatctgctcca
aagaaggatgtaaaacagccggaggagctaccaccgatcaccgcaaccactgcttctaca
accccagctactaacaccacttgtacagcgtccgttcctccacaacctcagtacagttac
catgacatcaacgtctactctctgggagggctggctccgcacattactctaaatccaact
attccactgttccaggcccacccacagctaaagcagtgcgtgcgtcaagctatagagcgt
gcagtgcaagagcttgtccatccagtggtagatcggtccattaagattgccatgactacc
tgtgaacagatagtcaggaaggactttgcactggattcagaggagtcacgcatgcgtgta
gcagcacaccacatgatgcggaacctgactgctggtatggccatgattacctgcagggaa
cctctgatgatgagcattgctaccaacttgaagaacagtttcgctactgcgctgcgggca
gcatccccacagcagagggagatgatggagcaggcagctgcacagttagctcaggataac
tgtgaattagcatgctgcttcattcagaagacagctgtggaaaaggcaggccctgaaatg
gacaaaaggctggcaactgaatttgagctcagaaagcatgctagacaagaaggtcgtcgg
tactgtgatcctgttgtattaacttaccaggctgaacggatgccagagcagatcagattg
aaggttggtggtgtggacccaaaacagctggctgtttatgaagagtttgcacgcaatgtc
cccggcttcttgcctaccaatgatttaacccagcccacaggattcttggctcagcctatg
aagcaagcttgggctacagatgatgtagcacagatctatgataaatgtatgacagaactg
gaacaacacctgcaatccataccacataccctggccatgaacccacaagctcaagcctta
cgcagcctgttggaggctgtagtagtagctcgtaactcccgtgatgcgatagctgcgctt
ggactgctccagaaggctgttgagggcttactagatgccaccagtggtgcggatgctgac
ctcctgctccgctaccgtgagtgtcacctacttgtactaaaagctctgcaggatggccgt
gcgtatgggtctccatggtgtaacaagcagatcaccagatgcttgattgaatgccgggat
gagtataagtacaacgtagaagctgtggagctgctaatccgcaatcaccttgttaccatg
cagcagtacgatcttcacttggcacagtcaatggagaatggcttgaactacatggcagtg
gcatttgccatgcagttggtgaggatcttgttggtggatgagaggagtgtagcccatgta
acagaggcagatctgttccacaccattgagactctgatgaggattaatgctcactccaga
ggaaatgctccagaaggattaccccagttgatggaagtggtccgatccaactatgaagca
atgattgaccgtgctcatggaggccctaacttcatgatgcattctgggatctcccaagcc
tccgagtatgatgatccaccaggcctgagggagaaggcagagtatttactgagggaatgg
gtgaatctctaccattcagctgcagctggccgtgacagtaccaaagctttctctgcgttt
gttggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaaaacggat
gatctgataactcggttctttcgtctttgcactgaaatgtgcgttgaaatcagctatcgt
gctcaggctgagcagcagcacaatcctgctgccaatcccaccatgatcagagccaagtgc
taccacaacctggatgcctttgtgcggcttattgcactgctagtgaagcactctggggag
gcaaccaacactgtcacaaagatcaacctactgaacaaggttcttggtatagtggtggga
gttctcctccaggaccatgatgttcggcagagtgaatttcagcagcttccttaccaccgc
attttcatcatgttgctgttagaattaaatgctcctgaacatgtgttggagaccatcaac
ttccagacccttacagccttctgtaacacatttcacatcctgaggcctacaaaagctcca
ggttttgtttatgcctggctggaactgatctcccatcggatatttattgcgagaatgctg
gcacatacaccacagcagaagggttggcctatgtatgcccagctgctaattgatctcttc
aagtacttggctcctttccttagaaatgtggaactcactaaacctatgcaaattctctac
aagggcactctgcgtgtgttgctggtcttattgcatgatttcccagaattcctttgtgac
taccactatgggttctgtgatgtgatcccaccaaactgtatccaactaaggaatctgatc
ctgagtgccttcccacgtaacatgaggcttccagatcctttcactcccaacctaaaagtg
gacatgttaagcgagattaatattgcaccacggatactcaccaactttactggagtgatg
ccccctcagttcaaaaaagatttggattcctatctcaaaactcgctctcctgtcactttc
ctgtctgacttgcgcagcaatctacaggtatcaaatgaacctggcaatcgctacaacatc
cagctgattaatgcactagtgctctatgtaggcactcaggctattgcacatattcacaac
aaaggcagcacaccctctatgagcactatcacccattcagctcacatggacatcttccag
aacttggctgtggacctggacacagaaggtcggtacctcttcttgaatgcaatcgccaat
cagctgcggtacccaaacagccatacgcactatttcagttgtaccatgctttacctattt
gcagaagccaatactgaggctatccaggaacagatcactagggtactgttggaacgactg
attgtaaataggcctcacccatggggtctcctcattaccttcattgagctgataaaaaat
ccagcgtttaaattctggaaccatgagtttgttcactgtgctccagaaattgagaagttg
tttcagtcagttgcacagtgctgcatggggcagaagcaggcacagcaagtgatggaaggg
actggtgccagttag
DBGET
integrated database retrieval system
