Dermochelys coriacea (leatherback sea turtle): 119843155
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Entry
119843155 CDS
T09064
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119843155 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcc03000
]
119843155 (PHF1)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119843155 (PHF1)
Transcription factors [BR:
dcc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
119843155 (PHF1)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
119843155 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
Tudor_2
PHD
Prok-RING_1
DUF4537
C1_1
Chromo
PHD_ash2p_like
ASH2L-like_WH
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
119843155
NCBI-ProteinID:
XP_038228025
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All DBs
Position
14:complement(40010426..40020235)
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AA seq
620 aa
AA seq
DB search
MTGQGRGCTKLWRAAERRGKETGVTPGLAAGDIGPFPSRIGHNVMASEQPAQTSRVTRTS
SRLTSGPWKCPAALAPAVAPSRPRFWEGQDVLARWTDGLLYLGTIKKVDASRQVCLVQFE
DNSQFLVLWKDINPAAVPGEEQICCVCYSESVSPENQLVRCEKCGHTYHQECHLPRVLDA
SSDGAGVLGAWMCRQCVFAVATKRGGALKKGPYAKAMLSMKLVLPYQLKALEWDPAHLTN
RQQCYCYCGGPGEWNLKMLQCCSCAQWFHEACTQCLSKPLLYGDRFYVFECCVCTGGPES
VRRLPLRWVDVAHLILYHLSICCKKKYFDFEREILPFASENWDNLLLGELSDTPKRDRYS
QLLSALSSHKDRFISGKEIKKRKGLFGLHIRVPPPAPQCPGDHGGSTAQQPPLTDSSFLS
GQGSSGAGHRRPRRRKVLPEPTDTMELRSSREKWQLDRALTQEVVETPVSASQTYCGYSG
TSSTYNFRRTDARCLESAPIRMFASFHPSANTARTLRSTTASPDPREAPAPESESPEHPP
AHTPLPHANYPAPSTKHQPEPLASPSSSSTLCPGPAPTSSSYFGAMGRLARGEAVRILAR
RVTLDGTVQYLVEWGGGGMF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacagggcagggaagagggtgcacaaagttatggagggcggcagaacggagagggaag
gagacaggagtgaccccaggtctggctgcaggagacattgggcctttcccctcaaggatt
ggtcacaatgtgatggcgagcgagcaacctgctcagacttcccgggtgacacgcacgagc
tcccgcctgacctccggcccctggaaatgtccggctgccctggcccctgctgtggctccc
agccggccccgcttctgggaggggcaggatgtgctggcccgctggaccgatggcctgctc
tatctgggtaccatcaagaaggtggatgcttcacggcaggtttgcctggtgcaatttgag
gacaattcccagttcctggtgctctggaaggacattaaccctgccgctgtgcccggtgag
gagcagatctgctgcgtatgttactcggagtccgtgagcccagagaaccagttggttcgg
tgtgagaaatgtgggcacacctaccaccaggagtgccatctgcccagagtgctggatgca
agcagcgatggggctggggttcttggtgcatggatgtgccggcagtgtgtcttcgctgtg
gccaccaagaggggtggtgcgctcaagaaaggcccctatgcaaaggccatgttgagcatg
aagctggtgctgccctatcagctcaaggctctggagtgggatcctgcacacctgaccaat
cggcagcagtgttactgctactgtggaggccctggagagtggaacctgaagatgttgcag
tgctgcagctgcgcccagtggttccatgaggcatgtacccagtgtctgagcaagccactg
ctttatggagacagattttatgtcttcgagtgctgtgtctgcactgggggtcctgagagc
gtacggagacttcccctgagatgggtggacgtggcccatctcattctctatcaccttagc
atctgctgcaaaaagaaatactttgactttgagcgggagattctgccgtttgccagcgag
aactgggacaacctgctgctgggagagctctcggatacacccaagagggaccggtacagc
caattgctgagtgccctgagtagccacaaagacaggtttatttcagggaaggagatcaaa
aagcggaagggtctctttgggctccacatacgagtgccaccccctgcacctcagtgccct
ggagaccatggtggctccacggctcagcagcccccacttactgacagcagcttcctttca
gggcagggcagcagtggggcagggcaccggaggccacggaggcgcaaggtcctcccggaa
cccacagacaccatggagctgaggagcagcagggagaagtggcagctggacagagccctc
acccaggaggtggtggagaccccagtcagtgctagccagacatactgtggctacagcggc
acctccagcacctacaacttccgccgcactgatgcccgctgcctggagagtgctcccatc
aggatgtttgcctccttccacccatccgccaacactgcccggaccctgaggagcaccact
gccagcccggacccccgtgaagcacctgccccagagagcgagagccctgagcatccccct
gcccacactccgctgccccatgcaaactacccagcccccagcaccaagcaccagccagag
cccctcgcctccccctcctcctccagcactctgtgtccaggccctgcccccaccagcagc
agctactttggagccatggggcgcctggcccgtggggaggctgtccgcatcctggcccgc
agggtcacccttgatggcactgtccagtacctggtggaatggggtggagggggcatgttc
tga
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