Dermochelys coriacea (leatherback sea turtle): 119863439
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Entry
119863439 CDS
T09064
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcc04040
]
119863439
Ion channels [BR:
dcc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119863439
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
Lustrin_cystein
SieB
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
119863439
NCBI-ProteinID:
XP_038277852
LinkDB
All DBs
Position
11:complement(37423402..37657883)
Genome browser
AA seq
1990 aa
AA seq
DB search
MAQALLVPPGPDSFFYFTRESLAAIEQRITEEKANRLKQDHKDDDVKEENGPKPNSDLEA
GKTLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNRGKAIFRFSATPALYILSPFHPL
RKAAIKILVHSLFSILIMCTILTNCVFMTLSKPPDWAKNVEYTFTGIYTFESLIKILARG
FCIDGFTFLRDPWNWLDFIVIAFAYLTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLLWPLNVSSSETRFAPFFIN
DTLFDWKAYIEKKDHFYSLDGQKDALLCGNSSDAGQCPEGYTCIKAGRNPNYGYTSFDTF
SWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEE
QNQATLEEAKQKETEFQQMLEQLKKQQEEAQAIAEAAAELRDFSGEDRICGLSESSSQTS
KLSSKSAKERRNRRKKRRQRELSGGEDKLDDEKLPKSDSEGSIRRKGFRFSLEGNRLTYE
KRFASSHQSLLSIRDSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFEENDSRRG
SLFVPLRHERHNSNISQGSRSSRRLPVNGKMHSTVDCNGVVSLVGVQTSLLSPTGQLLPE
VIIDKPTTDDNSTTSGLEIKKRRSSSYKISVDLLEDPTIRHRAMSIASILTNTMEELEES
RQKCPPCWYKFANTFLIWDCWAPWLKVKHIVSLIVMDPFVDLAITICIVLNTMFMAMEYY
PMTKQFHSVLSVGNLVFTGIFTAEMVLKLIAMDPYYYFQVGWNIFDGFIVTLSLVELFLS
NVDGLSVLRSFRLLRIFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ
LFGKSYKEYVCKISNKCVLPRWHMQDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLI
VFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNETNNLQIAVARIQRGIDYVKRKA
RECAQKIFVKGQKDVVEIKSISQLNNKEDNYTTNHTVAEMNRNLDNRKDENGATGIVGNR
DYASFIHNPNLTVTVPIAIGESDFEHLNTEEFSSESELEESKEKLNIYSSSEGSTIDITS
LGEEKADVDSEEALEPKACFTEGCVRKFKFCQVSLEDKRGKIWWNLRKTCYKIVEHNWFE
TFIVFMILLSSGALAFEDIYIEKRKIIKTMLEYADKVFTYIFILEMVLKWVAYGFQTYFT
NAWCWLDFLIVDVSLISLTANALGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALL
GAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFFSCVNTTTGNSFSRELIENKSDCEALMK
SSRDVLWKNVKVNFDNVGAGYLSLLQVATFKGWMDIMFAAVDSINIDQQPKYEESLYMYL
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPANKFQGLVFDIVTKQAFDISIMILICLNMVTMMIETDDQNDEMKRILYWINVVFI
VLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLDKVIEEYFVSPTLFRVVRLA
RIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGI
DDMFNFETFGNSMICLFQITTSAGWDGLLSPILNSGEPDCEPNKPHPGSSVKGDCGNPSV
GIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKYDPDATQ
FIEYSKLFDFAASLDPPLLIAKPNTLQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESDE
MDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSATVIQRAYRHYLLRQTVKKVSFM
YCKDKHGLPIKEDMTLDKLSENSAAEKTDRTPSTTSPPSYDSVTKPDKNKYEKDNSEKED
KSKDARESKK
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagcactgctggtaccaccgggacctgacagcttcttctacttcactagagag
tctcttgcagctattgaacaacgtatcactgaagaaaaggctaatcgtctcaaacaagac
cataaagatgatgatgtcaaggaagaaaatggtccaaagccaaatagtgacttggaagca
ggaaagacactcccatttatttatggtgacatacctccgggaatggtgtctgaacccttg
gaggacctggacccatattacatcaataaaaagacttttatagtattgaatagagggaag
gcaatcttccgattcagtgccacacctgccttgtacattttatctcctttccatcctctt
agaaaagcagctatcaagattttggttcattcattattcagcatacttattatgtgcact
attctaactaactgtgtatttatgacattgagtaaacctccagattgggcaaagaatgta
gagtacacttttactggaatttatacatttgaatctcttataaaaattcttgcaagaggc
ttctgtatagatggttttacttttcttcgagacccctggaactggcttgattttattgtt
attgcatttgcatatctgacagagtttgtggacctgggcaatgtctcagcattgagaaca
ttcagagttctccgagcattgaaaacaatatcagtcattccaggcttgaagactatcgtg
ggagccctcattcagtctgtgaagaagctctcggatgtaatgatcctgactgtgttttgt
ctgagtgtatttgcactaatagggctgcagctgttcatgggcaatttgaggaataaatgt
ttgctgtggcccttaaatgtatcttcttctgaaactcgatttgctccattcttcattaat
gacacattgtttgactggaaggcgtacattgagaagaaagatcatttttatagtttagat
ggacaaaaagatgccctgctttgtggtaatagctccgatgcaggtcaatgtccagaagga
tatacatgtataaaagctggtagaaaccccaactatggctacacgagttttgacacgttc
agctgggcattcttgtcactgtttcgactgatgactcaggattactgggaaaacctttat
caactgactctacgtgctgctggcaaaacatacatgatattttttgttctggtgattttc
ctgggttctttctatctgattaatttgatcctggctgttgttgccatggcctatgaagaa
cagaatcaagcaaccctagaagaagcaaagcagaaggagacagaatttcagcagatgctt
gaacagctgaaaaagcaacaagaagaagctcaggcaatagcagaagcggctgctgagtta
agagatttcagtggcgaagataggatttgtgggctttcagagagttcttcacaaacatca
aagttgagctcaaagagtgctaaagaaaggagaaacagaaggaagaaaagaaggcagaga
gagctttctggaggagaggacaagttggatgatgaaaagcttcccaaatccgattcagaa
ggcagtatcagaaggaaaggtttccgtttctctttggaagggaatagactgacatatgaa
aagcgtttcgcttcctcccaccagtctttgctgagcattcgtgactccctgttttcccca
agacgcaacagcagaacgagtcttttcagcttcagaggtcgagcaaaggatgtaggatca
gaaaatgactttgctgatgatgaacacagcacttttgaagaaaatgatagcagaagaggt
tctctttttgtgccactcagacatgaacggcacaatagtaacattagtcaaggcagcagg
tcatcaaggaggcttccagtgaacgggaagatgcacagtactgtggactgcaatggtgtg
gtttccttggttggtgtacaaacatcactcttgtcacctactggacagcttctgccagag
gtgataatagataaaccaactactgatgacaatagcaccacttcaggattagaaataaag
aagaggaggtcaagttcttataaaatatcagtggatttgctggaagatccaactataagg
cacagagcaatgagtatagccagcatactcacaaacacaatggaagaacttgaagaatcc
aggcaaaaatgcccaccatgctggtataaatttgccaacactttcttgatctgggactgt
tgggctccttggttaaaagtaaaacatattgttagtttgattgtgatggatccatttgtt
gatcttgctattaccatctgcattgttttaaacacgatgtttatggccatggaatattat
ccaatgactaaacagttccacagtgtgctttcagttggaaacctggtttttaccgggatc
ttcacagcagaaatggttctcaagttaattgccatggatccttattattatttccaagta
ggctggaatatttttgatgggtttattgttacccttagtttggtggagctttttctttca
aatgtggatggactatccgttctccgatcattcagattgttgcgaattttcaagttggca
aaatcttggcccacactaaataaactgataaagattattggtaactcagtgggggctttg
ggaaatttgaccttggtgctggccatcattgtcttcatttttgctgtggttggtatgcag
ctgttcggtaaaagctacaaggaatatgtctgcaagatctccaataagtgtgtacttcca
cgctggcacatgcaagacttcttccactctttcttgattgtattccgagtgttgtgtgga
gaatggatagaaactatgtgggactgtatggaggttgccggccaagccatgtgccttatc
gttttcatgatggtcatggtgattggaaatctagtggtactgaacctgtttttggccttg
ctgctgagctcatttagttcagacaaccttgctgctacagatgacgataatgaaacaaac
aatctgcagatagctgtggcaaggattcagaggggaatagattatgtgaaaagaaaagca
cgtgaatgtgcccaaaaaatctttgtgaaaggacagaaagatgtagttgaaataaagtca
atcagtcagctaaacaacaaggaagacaactacactaccaaccatactgtagctgaaatg
aatagaaatctggataatcgcaaagatgagaatggagccacaggtattgtaggcaaccgt
gattatgcatcattcatacacaacccaaaccttactgtgaccgtaccaattgctattggg
gaatcggattttgaacatttaaatacagaagagtttagcagtgagtcagagctggaggaa
agcaaagagaaattaaatatttacagttcatctgaaggtagtacaattgatataacttcc
cttggagaagaaaaagcagatgttgactctgaagaagcactagaaccaaaggcctgtttt
acagaaggctgtgtacgaaagttcaaattctgtcaagtcagcctagaagataagagagga
aaaatctggtggaatcttcgaaaaacctgctataagatagtagaacacaactggtttgaa
accttcattgtcttcatgattctcctcagcagtggtgctctggcttttgaagatatatat
attgaaaaacgtaagattatcaagaccatgctagaatatgctgataaggtcttcacttac
atcttcattctggaaatggtgctaaaatgggtcgcctatggttttcaaacctatttcacc
aatgcctggtgctggctggacttcctgattgttgatgtttctttgattagcttaacagct
aatgctttgggatactctgaacttggtccaattaaatcacttcgaacgctacgagctttg
agacctttgagagccttgtcacgatttgaaggaatgagggtggttgtgaatgccctttta
ggagcaataccatctattatgaacgtacttctggtttgtcttatattctggctaattttc
agcataatgggagtaaatttgtttgctggcaagttcttctcctgtgttaacaccacaact
ggtaactctttttcaagagaattgattgagaataaaagcgattgtgaggctcttatgaaa
agcagtagagacgtcctgtggaaaaatgtgaaagtaaactttgataatgttggagctggc
tatctttctctgcttcaagtagctacatttaaaggatggatggatatcatgtttgcagct
gttgattccataaatatagaccagcagcccaagtatgaagaaagcctgtatatgtatctt
tactttgtcatctttatcatctttgggtcattcttcactttgaaccttttcattggtgtc
atcatagataacttcaaccaacaaaaaaagaagcttggaggtcaagacatcttcatgaca
gaagaacagaagaaatattacaatgcaatgaaaaagctgggatccaagaaaccacaaaaa
cctatacctaggccagcaaacaaattccaaggtttggtgtttgatattgtaacaaaacaa
gcatttgatatcagcatcatgattcttatctgccttaacatggtcacaatgatgatagaa
actgatgaccagaatgatgagatgaaacgtattttatactggattaacgtggtctttatt
gtccttttcactggagaatgtgtcctcaaactaatttcactccgttattactacttcacc
ataggctggaacatttttgattttgtggttgtcattctctccatagtaggtatgtttcta
gacaaggtgattgaagagtattttgtgtcccccaccttgttcagagttgtccgactcgcc
agaataggtcgaatcctgcgtctcattaagggagctaaagggattcgcactctgcttttt
gctttgatgatgtctcttcctgctttgtttaacattggtctcctgcttttcctggtcatg
tttatctatgctatatttggaatgtccaactttgcttatgttaagaaggaagctgggatt
gatgacatgttcaactttgaaacttttggcaacagcatgatctgcctatttcaaattacc
acgtctgctggttgggatggtttgctgtcaccaattcttaacagtggagaaccggactgt
gagcctaataaacctcacccaggaagctctgttaaaggagactgtggtaacccttcagtt
gggattttcttttttgtcagttatattatcatctcatttctagttgtagtaaacatgtat
attgctgttattttggagaacttcagtgttgctacagaagaaagtgccgagcccttgagt
gaggatgactttgagatgttctatgaggtttgggaaaagtatgatccagatgcaacccag
tttatagaatacagtaaactgtttgattttgcagcctctttggatcctcctcttcttata
gcaaaaccaaacacacttcagctcattgcaatggatctgcccatggtaagtggtgacaga
attcactgccttgacatcttgtttgcttttacaaagcgtgttttgggggaaagtgatgag
atggatgcacttagaatacaaatggaagatcgttttatggcggccaatccttctaaagtc
tcctatgaaccaattacaaccacattaaaaagaaaacaagaggaagtgtctgctactgtt
attcagcgagcttacagacattaccttttaaggcaaacggtaaaaaaagtttcatttatg
tattgcaaagataagcatggtctgcctatcaaagaagatatgactctggataagctaagt
gaaaactcggctgcagaaaaaacagataggaccccctccacaacctctccaccttcctac
gatagtgtaacaaagccagacaaaaacaaatatgaaaaagacaactcagaaaaagaagac
aaaagtaaggacgccagggaaagtaaaaagtaa
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