Diaphorina citri (Asian citrus psyllid): 103507842
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Entry
103507842 CDS
T07332
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dci
Diaphorina citri (Asian citrus psyllid)
Pathway
dci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103507842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dci03019
]
103507842
Messenger RNA biogenesis [BR:
dci03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103507842
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103507842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
ARM_Cnot1
DUF3819
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF5891
Motif
Other DBs
NCBI-GeneID:
103507842
NCBI-ProteinID:
XP_026678412
UniProt:
A0A3Q0IQ96
LinkDB
All DBs
Position
Unknown
AA seq
2166 aa
AA seq
DB search
MSSITQPSTDEFGVRDEKVEPETVKVNRTMMKGSFSRLGLQSQGFHPDRFPVDQIYRHWK
HAESQVTLIQHILKNPDIFCFADFPFLSTSVELLKAQPDLDNKEIATWWKDKSGLGQLVS
TTPGSPSRLIPPSQSPAAFQLMPQLGGPVAAQVGHSPSLVSAAGMGNMGNRLGHQTKQAF
DTTSRLGDMSTSTGPFFSESIPVSKEIEDEANSYFQRIYNHPPHPTLSIDEVLEMLKKFQ
DSNIKREKLALFQAQPVLKPLVRTALALFQAQPVLKPLVRTAVERSIHEWISLVVERAVK
IAVNTAEQIVKKDFALDPDEGRMRSAAHHIARNLTAGMAMITCRDQLQQSIKANLKNFMH
LGLGLRFVLDAIRNSCQNETEKSVSQELSEVILTMFSNCARNFMHLGLGLRFVLDAIRKP
HGSKMYYFGIAALDKFKSKMKDYPKYCEHLASIPHFDQFPPHLIEYIEYGKQALEPPNRP
QGSVLPPSLAVGNQLSFKTVSQTNTTTTTTSSITKAANSAIMSSRPSIANATNIDTLLVA
TETDDKIVVPPENMQDKVGFVFNNLSQLNLSTKCDELRNLVTEEFWPWLSQYLVMKRASI
EFNFHVLYSNFLDEIKLPALRNLVTEEFWPWLSQYLVMKRASIEFNFHVLYSNFLDEIKL
PDVTDMVIKETYRNIKVLLRSDKGIANFSDRTLLKNLGHWLGMLTLGRNRPILMVDLDLK
SLVAEAYKKGQQELLYVVPFVAKVMESCSRSKIFKVPNPWTTAILESAFNGVDEMGTIYD
KLISEVEIFLASLVTLVGVQNTLLPSSLHALIEALVALRRTRDAHSAVALIQKDLVPSYY
LKDPDNLKFSELQLAVTHKKPPPQALTQPAVAQHEAQQALGASHSQQSTPIMQATSQPLH
TPSADAADNFRFSSSNSLGLSSNTSWLPLAGGAGANSIPLGGANNSGPGLNADELLAQIN
AQSSGAAAQTMAAQSSTPPLTMQQPPEPRYSYTSVNVANIGNIAPHIVINSQLALFQAQP
VLKPLVRTAVERSIHEWISLVVERAVKIAVNTAEQIVKKDFALDPDEGRMRSAAHHIARN
LTAGMAMITCRDQLQQSIKANLKHLFTTAITNATPQQKELMDQTVTICAGDNMELACAFI
QKTAIEKALPDIDKHLAGEYERRKHARSEQRRYCDSQVLTYQAERMPEQIRLKVGGVTPQ
QMAVYEEFARNIPGFQPLSERDAALFLPKPEPPPPGPPVVPASLMQQATQQNQLSAFNGV
DEMGTIYDKLISEVEIFLASLVTLVGVQNTLLPSSLHALIEALVALRRTRDAHSAVALIQ
KVIENLLDGHTHIPNDPELTLRYKDLHLRIVKALQDLRAFGVQWTNKQITRCLIECREEY
RYNLEAVDTLISLQKVIENLLDGHTHIPNDPELTLRYKDLHLRIVKALQDLRAFGVQWTN
KQITRCLIECREEYRYNLEAVDTLIRAQLIHLPQYDLALAHSMENGLNYVAVAFCMQLLQ
HYLVEERGTAGVTESDMLNTLEVLIRIASHHRQPPEGLTALIDMLRANHHDQPMLVERAP
GAQTLNSGLPNFSLNAATGPAVHIHSGILQVRGIRDLDDPPGLFEKTEYLLREWVTIYHS
PAGVKDPNKAFTLFVHQMNCHGILKSDELITRFFRFATSLVVGVSPTPTRSKMFQTLDAY
AKLIALLVKHSGSGEHANSNTKINLLNKVLGIISGVLITDQEARQHEFHQLPYHRIFIML
FLELNVPDPVLEAINFQVLSAYCSVLHILRPSKQPGFAYAWLEIVAHRTFIGRMLVITPH
QKVSMLNCVYITFQGWPLYAQLLIDIFKFLAPFLRNVELSKPNLTFYKGVLRVLLVLLHD
FPEFLCDYHYQFCDVIPANCIQMRNLILSAFPGNMRLPDPFTPNLKVDTLADINQAPRMH
ADFASLIQPATFKKDLDAYLKTRSPVTFLAEVRAAVQVSHEPGSRYNTELMNAIVLYVGT
QAILSIRAKSLSPNNKTIAHSAHMDIFLNFAVDLDTEGRYLFLNAIANQLRYPNSHTHYF
SCLLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPVYKFWDHEFVH
CAPEIEKLFESVARSCMVQKHTSHTPTEHDLNSDMKMMSQPQPQQSVMNPQQQQQQQQQS
ASFPLA
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtattactcagccaagtactgatgaattcggtgtcagagatgagaaagtagag
ccagaaactgtgaaagtcaatcgaactatgatgaaaggcagcttctccagacttggtctt
caatcgcaaggatttcatcctgaccggttccccgtggatcagatctatcggcactggaaa
catgccgagtctcaggtcaccctcattcagcacatactcaagaaccccgacatcttctgc
tttgctgacttcccgtttctgtcgaccagtgtggagctgcttaaagctcagcctgacttg
gacaacaaggagattgcaacttggtggaaagacaaaagcggtctaggccagctcgtctct
acaactcccggctctccatcccgtctcataccgccctctcagagtccggcggccttccaa
cttatgccgcaactaggcggccctgtggcggcccaagtaggtcattcaccttccctggta
tcggcggccggtatgggcaacatgggcaaccgactcggtcatcagaccaaacaggcgttt
gataccaccagtcgactcggagacatgagcaccagcactggtccatttttctccgagtcc
ataccagtgtcgaaggagatagaggacgaggctaacagctacttccaacggatctacaat
caccctcctcatccgacactgtccatagacgaagttctggaaatgctcaagaagttccag
gactccaacatcaaacgagaaaagcttgcgctcttccaagcgcaacccgtactcaagccc
ctggtgcgcaccgcacttgcgctcttccaagcgcaacccgtactcaagcctctggtgcgc
accgcagtcgagcgctccattcacgaatggatctccctggtggtcgaacgcgcagtcaag
attgcggtcaacacggccgaacaaatagtgaagaaggactttgcgctggatccagatgag
gggcgcatgcgctcagctgcgcaccacattgcgcgcaacttgacggcgggcatggctatg
atcacgtgccgggaccagctacagcagagcatcaaggcgaaccttaagaactttatgcat
ctgggtctgggcctccggtttgttctggacgccattcggaactcctgccagaatgagact
gaaaagtcggtgtctcaggagctgagcgaggtgatcctcacaatgttctccaactgcgct
cggaactttatgcatctgggtctgggcctccggtttgttctggacgccattcggaagccg
cacggctccaagatgtactacttcggtattgccgcccttgacaagttcaagtccaagatg
aaagactaccccaagtattgcgaacatctggccagtatacctcactttgaccagttccca
ccacatcttatagagtatatcgagtatggaaagcaagccctggagccccccaatcgccca
caggggagtgttctgccacccagcctggcggtgggtaaccagctgagcttcaagacggta
tcgcagaccaacaccaccactacaaccacgagctccatcaccaaggctgccaacagcgct
atcatgtcctctcgtccgtctatcgctaacgccacaaacatagacacactgcttgtggcc
acggagactgatgacaagatagtggtgccacctgaaaacatgcaagacaaagtgggcttc
gtattcaacaacctgagtcaactcaacttgtccactaagtgtgatgagctgcgtaatcta
gtgactgaagagttctggccgtggctgtcccaatatttggtcatgaagcgagccagtatt
gagttcaactttcacgttctctactcgaacttcttggatgagatcaaacttcccgcgctg
cgtaatctagtgactgaagagttctggccgtggctctcccaatatttggtcatgaagcga
gccagtattgagttcaactttcacgttctctactcgaacttcttggatgagatcaaactt
cccgacgtcactgatatggtcataaaggaaacctatagaaatatcaaggtactgctccgc
agtgacaaggggatcgccaacttctcggaccgcaccctcctcaagaacctgggtcactgg
cttggaatgctcactctgggccgcaaccgacccatcctcatggtagatctggatctgaag
tctctggtggccgaagcgtacaagaagggacagcaggagctactctacgtggtcccattt
gtagccaaggttatggagtcttgctcacgaagcaagatattcaaagtacctaatccatgg
accacagccatacttgagagcgctttcaatggagtggacgaaatgggtaccatctacgac
aagctcatctcagaagtagagatcttcctcgcctctctggtcaccttagtgggagtacag
aacactctactgcctagctctctacacgccctcattgaagctttggtagcactgcgcaga
acacgcgatgcgcactctgccgtggctctaatacagaaggatctagtgccgtcctactat
ctgaaagatccggacaatctgaaattctccgagctacagctagccgtaacgcacaagaaa
ccaccgccccaagcgttaacccagcccgccgtagctcaacacgaggcgcaacaggcactg
ggcgcctcgcacagtcaacagtccacgcctatcatgcaggccacctctcagcctctgcat
acacctagcgcggacgcagccgacaacttccgattctcctcgagtaacagtctcggcttg
agcagcaacacgtcctggttgcccctggctggtggggccggggctaactctatccccctg
ggcggggccaacaactccggccctggtttgaacgccgatgaactcctggctcagattaac
gcgcagagctcgggagccgcggcccaaacaatggcggcccagtcgtctacgccgccgctg
actatgcaacaaccgcccgagcctcgctactcctatacgagcgtcaatgtggccaacatt
ggcaacattgcgccccatattgtgattaactcacagcttgcgctcttccaagcgcaaccc
gtactcaagcccctggtgcgcaccgcagtcgagcgctccattcacgaatggatctccctg
gtggtcgaacgcgcagtcaagattgcggtcaacacggccgaacaaatagtgaagaaggac
tttgcgctggatccagatgaggggcgcatgcgctcagctgcgcaccacattgcgcgcaac
ttgacggcgggcatggctatgatcacgtgccgggaccagctacagcagagcatcaaggcg
aaccttaagcatttgtttactactgctattacgaacgccacccctcagcagaaggagctg
atggatcagaccgtcaccatctgcgccggagacaacatggaactggcgtgtgcgttcata
cagaagacagctatcgagaaggcactgcccgatatagacaaacatctggctggggagtat
gagagacgcaaacatgcacgatccgaacagaggcgctattgtgactcacaggtcctgacc
taccaagccgagcgtatgccggaacagattcgtctgaaggtaggcggcgtgaccccgcaa
caaatggccgtgtatgaggagtttgcccgcaacattcccggcttccagcccctctccgag
cgcgatgcggccctattcctgcccaagccggagcccccgccgccaggcccgcccgtggtc
ccggccagtcttatgcagcaggccacccagcagaaccagctgagcgctttcaacggagtg
gacgaaatgggtaccatctacgacaagctcatctcagaagtagagatcttcctcgcctct
ctggtcaccttagtgggagtacagaacactctactgcctagctctctacacgccctcatt
gaagctttggtagcactgcgcagaacacgcgatgcgcactctgccgtggctctaatacag
aaggtaattgaaaacctcctggacggccacacgcacatccccaacgaccccgaactgacc
ctccgctacaaggatctccatttgagaatagtgaaggcgctacaagacctgagagcgttc
ggtgtacaatggacaaacaagcagatcacacgatgcttgatcgaatgtcgggaagagtac
aggtacaacttggaagctgtggacactctgatcagcctccagaaagtaattgaaaacctc
ctggacggccacacgcacatccccaatgatcccgaactgaccctccgctacaaggatctc
catttgagaatagtgaaggcgctacaagacctgagagcgttcggtgtacaatggacaaac
aagcagatcacacgatgcttgatcgaatgtcgggaagagtacaggtacaacttggaagct
gtggacactctgatcagggcacaactcattcatctaccccagtatgatctagcactagcg
cactctatggagaatggactgaactacgtggctgtagcgttctgtatgcagctactgcag
cattatctggtagaggaaagaggaactgctggagtgacggaatccgacatgttaaacact
ctggaggtgcttattcgaattgcatcccatcatagacagccacctgagggtttgaccgcc
ctgattgacatgctgcgcgccaaccatcacgaccagcccatgctagtagagcgcgcaccc
ggggctcaaaccctgaactctggactaccgaacttctctctgaatgccgccactggtcct
gctgtacatatacactcgggtattctacaagtgagaggcattcgtgatttggatgatcct
cctggcctgtttgagaagactgaatacttgctcagagaatgggtcaccatatatcactcc
ccggccggcgtcaaagatcccaacaaggcgttcaccctgtttgtacatcagatgaactgc
cacggtattctcaagtcagacgagctgattactcgcttcttccggttcgctacctcgctg
gtcgtaggcgtctcacctacaccgacccggtccaagatgttccaaacattggacgcctac
gctaagctgatagcgctgctggtcaaacactcgggctccggggagcatgccaatagtaac
acgaagatcaatctgctcaataaggtcctgggcattatatccggtgtgctgatcacagac
caggaagctcgtcagcatgaattccatcagctcccctaccacaggatcttcatcatgctg
ttcctggaactaaacgtccctgatcctgtactcgaagctatcaacttccaggtattgtca
gcgtattgcagtgtactacatatcttgagaccatccaagcagcctggtttcgcctacgcc
tggctggagattgtcgcacatcgtacgttcattggacgaatgttggtcatcaccccacac
cagaaggtaagtatgttaaattgtgtttatatcactttccagggctggcctttgtacgca
caactcctgattgacatcttcaaattcctggctccgttcctgcgtaatgtggagctatcc
aaacctaatttgaccttctacaagggtgtccttcgagtacttctggtactgctgcatgac
ttccctgagttcctctgtgattatcattaccagttctgtgacgtcatacctgccaattgt
attcagatgcgcaacctgatcctgtcggcattcccgggtaacatgcgtctacctgaccct
ttcactccgaacctgaaggtggacactctggccgatatcaatcaggcacctcgcatgcat
gctgactttgcttcgcttattcagcccgccaccttcaagaaggacctggacgcctatctg
aagacgcggtcacccgtcacattcctggccgaggtcagagcagctgtacaagtgtcccac
gagcccggctctcgctacaatacggaactcatgaacgccatagttctctatgtgggaacc
caggctatactgagcatccgagccaagtccctgtcccccaataacaagacaatagcacac
tccgctcatatggacatcttcctgaactttgccgtggatctggataccgaaggtcgctat
ctattcctgaacgctatcgccaatcagcttcgttatcccaactctcacactcactacttc
agctgtctgctactgtacttgtttgccgaggctaatacagaggctatccaggaacaaatc
actagggtccttctggagcgactcatcgtgaaccgacctcacccatggggcctcctgatc
accttcatcgagcttatcaagaaccctgtatacaagttctgggatcacgagtttgtgcac
tgcgcccccgaaatcgaaaaattattcgagtcggtagccagatcttgcatggtacagaag
cacacctcacatacccccaccgaacatgaccttaactctgacatgaagatgatgtcgcag
ccccaaccccagcaatccgtaatgaatccccagcagcagcaacaacaacagcaacagagt
gcctcattcccactcgcctag
DBGET
integrated database retrieval system
