Diaphorina citri (Asian citrus psyllid): 113469805
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Entry
113469805 CDS
T07332
Name
(RefSeq) uncharacterized protein LOC113469805
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dci
Diaphorina citri (Asian citrus psyllid)
Pathway
dci03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113469805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dci03400
]
113469805
Enzymes [BR:
dci01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
113469805
DNA repair and recombination proteins [BR:
dci03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
113469805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_IV
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
113469805
NCBI-ProteinID:
XP_026683528
UniProt:
A0A3Q0J994
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
GVEGELQQMLTKMSALEQKWLIRILLKSPHMGLGGSHILDAFHPDASDLYDVCHNLEKVC
SMLHNPSTRLHEIEVVLFEPFRPMLSQRLDIQAIETDLRARDFYYVEPKFDGERFQLHYE
DGKFKYFSRGQSRPHAKPRFLEELVDLSQKMSPHWNRTRVGQLPDRIEWTREKPDLWIAP
EHSYVLQVKATEVVRSDAFKVQYCLRFPRIQAVRYDKTPGDCLTVEEFHGIRTRGQGKLC
YESISMGSTLSSLGKPTRSPRKRKEATLGTEYTSVGYNYYRYCSRLQYKQLGVHVYRSQV
LPALNKAIDDREEGIVVKEPDALYKPNSRKDGWYKIKPEYTEGAMVELDMLIIGGYYGKG
SQRGIVSQFLLGLLDKYNDGEPNSKGSRFVSAGKVGIGLSMEELVDLSQKMSPHWNRTRV
GQLPDRIEWTREKPDLWIAPEHSYVLQPNSKGPRFVSAGKVGIGLSMEELVDLSQKMSPH
WNRTRVGQLPDRIEWTREKPDLWIAPEHSYVLQCNILEPLFVCLSVRLSLCLPIYRTDTW
CCVVTEERNIRVRHIVSGGNYNVVRAGWLERCVARKTLLEWTPDEVLCLVGDALIEMNNK
YDPYGDSYTEPLSVERLASLLNRIDQAPILTPREVEELENELYVSANKHPVSTNRNGVSA
NRSNESTNSSVLSANSNTSASSHGVSSNRDGVSASRKGVSANITSVPTNSSTVSTNKSAM
STNSNTLSVNIEGVFSNSSTISTNKISVSANKDPMSANRSTVSANKGAVFRGCLAYFTVS
SRLSRVRFRFYGGIICDALSDRVTHVVVGRESELREMKEMLGRVGEGGRRGEEMGRALGG
TGGGYREGERFEEERGGGRREGGERREEEKRGERGVGEGTREVGFVDEKWIEKCIRSGTK
LACTYVLCLVGDALIEMNNKYDPYGDSYTEPLSVERLASLLNRIDQAPILTPREVEELEN
ELYVSANCVLCLVGDALIEMNNKYDPYGDSYTEPLSVERLASLLNRIDQAPILTPREVEE
LENELYVSANKHPVSTNRNGVSANRSNESTNSSVLSANSNTSASSHGVSFNRDGVSANRE
GVSANITSVATNSSTVSTNKSAMFTNSNTLSVNIEGVSSNSSTVSANKGAVFRGCLAYFT
VSSRLSRVRFRFYGGIICDALSDRVTHVVVGRESELIDCPLTDKFSVSANKDPMSANRST
VSANKGAVFRGCLAYFTVSSRLSRVRFRFNGGIICDALSDRVTHVVVGRESEVREMEMLG
RVGEGARRGEEMGRALGGTGGGFREGERFEEERGGGERREEEKRGERGVGEGTREVGFVD
EKWIEKCIRSGTKLACTYS
NT seq
4022 nt
NT seq
+upstream
nt +downstream
nt
ggggcgtggaaggtgaacttcagcaaatgttaaccaagatgtctgctttggaacagaagt
ggctgattcggattctactgaagagtcctcacatgggacttggtggatctcatatactgg
acgcatttcatccggatgctagtgatctatatgatgtgtgccataacttggagaaggtgt
gttccatgttgcataaccccagtactcgtctacatgaaatagaagtagtactatttgaac
catttcgccccatgctgtctcaacgtctcgacattcaagctatcgagacagatctacgag
cacgagacttttattatgtcgagccaaagtttgatggcgagagatttcagctgcactacg
aggacgggaagttcaagtacttttcacgcggacaaagtagaccccatgcgaagccaagat
tcctggaggaactggtggacctgtcacagaaaatgtccccccactggaatcgaacccggg
tcggtcaactaccagaccggatagagtggacaagagagaaaccagacttgtggatagcgc
cggaacattcctatgtattacaggtgaaagccaccgaggtagtgcgcagtgacgcgttca
aagtacaatactgtctccggttccctcggattcaagcggtgcgatatgacaagacaccgg
gggactgtctcacggttgaagagttccatgggattcgaacccggggtcagggtaaactgt
gctatgagagtatatccatgggcagtactctgagctcactgggcaaaccgactagatccc
ctaggaaacgtaaggaggctaccctgggcacagaatacacatcagtaggctacaactatt
atcgctactgcagtaggctacaatataaacagttgggtgttcatgtctacagatctcaag
tgttgccagcattgaacaaagctattgatgacagagaagaaggaatagtagtcaaggaac
cggatgctttgtataagcccaactctaggaaagatggctggtacaagattaaacctgagt
acactgaaggagctatggtagagttagacatgcttatcataggaggatattatggcaagg
gatcacagcgcggtatagttagtcaattcctgttgggactactggacaaatacaatgatg
gagagccgaattccaaaggttcccgcttcgtttcggccggtaaagtgggtatcggtctct
ccatggaggaactggtggacctgtcacagaaaatgtccccccactggaatcgaacccggg
tcggtcaactaccagaccggatagagtggactagagagaaaccagacctgtggatagcac
cggaacattcctatgtattacagccgaattccaaaggtccccgtttcgtttcggccggta
aagtaggtatcggtctctccatggaggaactggtggacctgtcacagaaaatgtcccccc
actggaatcgaacccgggtcggtcaactaccagaccggatagagtggactcgagagaaac
cagacctgtggatagcgccggaacattcctatgtattacagtgtaatatactagagcctt
tgtttgtttgtctgtctgtccgtctctcattatgtctacctatctatcgcacagacacgt
ggtgttgtgtggtgactgaggagcggaatatacgcgtgcggcacatagtgagtggcggca
attataatgtggtgcgggccggatggctggaacggtgtgtggcgaggaaaaccctgctgg
aatggacaccggatgaggtgctgtgtctggtaggcgacgcattaatagaaatgaacaaca
agtacgacccatacggtgatagctatacggaacctctctctgtcgagcgcctagcatctc
tactaaaccggatagaccaagcacccatcctcactccgcgcgaagtggaagaactggaga
acgaactgtatgtgtccgccaataagcatccagtgtccaccaataggaatggagtttccg
ctaataggagcaatgagtccactaatagtagtgtattgtccgccaatagtaacacatccg
ccagtagtcatggagtgtcctctaacagggatggagtttccgccagtaggaaaggagtgt
ccgccaatattacctcagtacccaccaatagtagcacagtatccaccaataagagtgcca
tgtccaccaatagtaacacattatctgtcaatatcgaaggagttttcagcaatagtagca
caatatccaccaataagatctctgtatccgccaataaggatccaatgtccgccaatagaa
gtacagtatccgccaataagggcgcagtgttccgcgggtgtctagcgtacttcaccgtga
gttctagactgtcccgggttcgattccggttctatggcggaattatttgtgatgcgttga
gtgatagggtgacgcatgtggtggtggggagagagagtgagttgagagagatgaaggaga
tgttgggaagagtgggagaaggaggaaggagaggagaagaaatgggaagagcattgggag
gaactggaggaggatatagggaaggagaaagatttgaggaagaacgaggaggaggaagaa
gagagggaggagaaagaagagaagaagaaaaaaggggggaaagaggagttggagaaggaa
ctagagaggtggggtttgtggatgagaagtggatagagaaatgtatacgaagtggaacaa
aattggcgtgtacgtatgtactctgtctggtaggcgacgcattaatagaaatgaacaaca
agtacgacccatacggtgatagctatacggaaccactctctgtcgagcgcctagcatctc
tactaaaccggatagaccaagcacccatcctcactccgcgcgaagtggaagaactggaga
acgaactgtatgtgtccgccaactgtgtgctgtgtctggtaggcgacgcattaatagaaa
tgaacaacaagtacgacccatacggtgatagctatacggaacctctctctgtcgagcgcc
tagcatctctactaaaccggatagaccaagcacccatcctcactccgcgcgaagtggaag
aactggagaacgaactgtatgtgtccgccaataagcatccagtgtccaccaataggaatg
gagtttccgctaataggagcaatgagtccactaatagtagtgtattgtctgccaatagta
acacatccgccagtagtcatggagtgtcctttaacagggatggagtttccgccaataggg
aaggagtatccgccaatattacctcagtagccaccaatagtagcacagtatccaccaata
agagtgccatgttcaccaatagtaacacattatctgtcaatatcgaaggagtttccagca
atagtagcacagtatccgccaataagggcgcagtgttccgcggatgtctagcgtacttca
ccgtgagctctagactgtcccgggttcgattccggttctatggcggaattatttgtgatg
cgttgagtgatagggtgacgcatgtggtggtggggagagagagtgagttaatagactgcc
ccttgactgataaattttctgtatccgccaataaggatccaatgtccgccaatagaagca
cagtatccgccaataagggcgcagtgttccgcgggtgtctggcgtatttcaccgtgagct
ctagactgtcccgggttcgattccggttcaatggcggaattatttgtgatgcgttgagtg
atagggtgacgcatgtggtggtggggagagagagtgaggtgagagagatggagatgttgg
gaagagtgggagaaggagcaaggagaggagaagaaatgggaagagcattgggaggaactg
gaggaggatttagggaaggagaaagatttgaggaagaacgaggaggaggagaaagaagag
aagaagaaaaaaggggggaaagaggagttggagaaggaactagagaggtggggtttgtgg
atgagaagtggatagagaaatgtatacgaagtgggacaaaattggcgtgtacgtattcct
ga
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