Daucus carota (carrot): 108198690
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Entry
108198690 CDS
T05350
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00531
Glycosaminoglycan degradation
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108198690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dcr00536
]
108198690
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
108198690
Glycosaminoglycan binding proteins [BR:
dcr00536
]
Heparan sulfate / Heparin
Enzymes
108198690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
108198690
NCBI-ProteinID:
XP_017221961
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All DBs
Position
1:complement(48722050..48725164)
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AA seq
520 aa
AA seq
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MGSCMKAFALFVFLSLAGLSLSERVQVKVRSVTSIAETDNNYICATMDYGPSTMCNYGQC
PWRKVGILELDLKNKILANAIKAFNPLRLRVGGSLEDQTVYKVGLVTKCPHFKHNMNVRR
FGMSNGCINMERWDQLNHFFNETGAKVTFGLNALRGKKLENKNSTLWVGNWNKLNAQEFM
KYTISKGYKIDSYELGNELSASGVFARVNAGQYGKDMIILSNLVKKLYANFSDQPKIIGP
GGFYDKEWFNEFLRVSGPGIVDGLTHHIYNLGAGDDPKLIKRVQDPFYLDEIAQTFKDIS
ESIKRYGPWSGAWVGESGGAYHSGGRNVSDTFADGFWYLDQLGMASTFDHKVYCRQVLIG
GNYGLLNTTTFAPNPDYYGALLWHRLMGPRVLQASHDGSPYLRSYAHCSKDSERGDITVL
LINLSNSTTFVVNTVNDLNLYPSEHTESFPPREEYHLTPEGGNIQSQVVLLNDTPLKLTK
TMEIPNLNPALVSPLEPIKVAPHSFVFAVLRGFGAPACSS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatgcatgaaggcttttgcattatttgttttcttgtcattggctggtttatct
ctgagcgagagagttcaggtaaaagtaaggagtgttacatctattgcagaaactgataat
aattatatttgtgcgacgatggattatgggccttctaccatgtgcaactatgggcagtgt
ccatggcgtaaagttggcatccttgagttggatttgaagaacaagattcttgctaatgcc
atcaaggcgtttaaccccttgaggctaagagttggagggtcattggaagatcagacggtt
tacaaagttggattggtcaccaaatgtcctcacttcaaacacaacatgaatgtcagacgt
tttggaatgtccaacggctgcatcaacatggaaagatgggatcagctcaaccacttcttc
aacgaaactggggctaaagtgacattcggtctgaatgctcttcgcgggaagaaattagag
aacaagaacagcacactttgggtaggtaactggaacaaactaaatgcccaggagttcatg
aagtacaccatctccaaaggttacaagattgattcgtatgaacttggaaatgagctatct
gcatctggggtttttgcaagggttaatgctggacaatatggaaaagacatgattattctt
agcaatcttgtcaaaaagctgtatgccaatttttccgatcagccaaaaattataggtcct
ggtggcttctacgataaggaatggttcaatgaattccttcgggtttcaggaccaggaatt
gttgatggtttaacccaccatatctataatcttggtgcaggcgatgatccaaaacttata
aaaagagttcaagaccccttttacctggacgaaatagcacaaacattcaaagatatttca
gaatcaattaagcgatatgggccatggagtggtgcatgggttggagaatctgggggtgct
taccatagcggtggcagaaatgtttctgatacttttgctgatggattttggtatttggat
cagctgggcatggcctccacttttgatcataaagtttactgcagacaagttttgattgga
ggaaactatggtcttcttaatacaacaacatttgcccctaaccctgattactatggcgcg
ctgttgtggcatcgcctcatgggacctagagttctccaagccagtcatgatggatctcct
tatttgcgttcatacgcgcattgttccaaagattctgaaagaggtgacataacggtgctt
ctgataaatttgtcaaactctaccacttttgtagtgaatactgtgaatgatctaaatctt
tacccaagtgaacataccgagagcttcccaccaagagaagagtaccatctgacaccagaa
ggcggcaacattcaaagccaagtagttctattgaatgatacaccattgaagctgacaaag
acgatggagatcccaaatctaaatccagctttggtgtctccactcgaacctatcaaagtt
gctcctcattcttttgtctttgcagtcctaagaggttttggtgctcctgcttgttcttcg
taa
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