Daucus carota (carrot): 108203830
Help
Entry
108203830 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108203830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108203830
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108203830
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
HECT type E3
108203830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
108203830
NCBI-ProteinID:
XP_017228515
LinkDB
All DBs
Position
1:complement(30182406..30203735)
Genome browser
AA seq
1031 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSSKERDRQKLLEQTRLERNKRLRLRQQNTAATNIQKCFRGRK
VVEAERSKVREQFFSVYGRHLQNVDRSCFGPNSNFLRQFLFFFNAKNATDYSALVEVCRL
LRQFVQNSGDIYVLFGGTDYLFEDESVSYRVKRFAYACIQAVYENRNQLKDQLIMAPSGS
STSTTLLLESLVMLIEPQVSWSCKIVAFLLQRNVYYQIREIIFTAKKSTSFQGPAAKDSS
LEHVLVLIMSHMGQKPCICATDVRWTFISQILTIPFLWQLFPYLKKIFTTNDLSQQYIHH
MTIFAKGPDKVLPVDMSAEFPGYACLLGNLLEAAALAFARPDCSFDLAMDFTVVATSFLE
ELAPFYTLNTKSKEADDDEMAIDEKTNDKVLNVDLERQISNAIDPRFLLQLTNVLFKGFS
HANGSYKERPSNKEVAAVTAACSFLHVTFNILPLERIMTVLAYRTEIIPVLWNFMKRCHE
NQNWSSFSEHSAYLPGDAPGWLLPLAVFCPIYKHMLMIVDNEEFYDQEKPLSLKDIRCLI
VILRQALWQLLWLNPSMPASSAKSATNTNSLRSRPVEFIQHRVSIAASELLSQLQDWNNR
RQFTPPSDFQADGVNEHFNSQAMVEGSRAYDVLKRAPFLVPFTSRVKIFTSQLAAAKETS
DSHAVFTRNRFRIRRDHILEDAFSQLSSLSEEDLKAAIRVTFVNEFGVEEAGIDGGGIFK
DFMENITRAAFDAQYGLFKETTDHLLYPNPGSAMVHEQHLQFFHFLGTLLAKAMFEGILV
DIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEGDISELELYFVIVNNEYGEQ
TVEDLLPGGKNLRVTNENVITFIHLVANHRLNYQIRQQSSHFFRGFQQLIPKDWIDIFNE
HELQLMISGSVDGFDLDNLRSHTNYAGGYHQDHYVIDMFWEVLKSFSMENQRKFLKFVTG
CSRGPLLGFKYLEPLFCIQRAGGEASEEALDRLPTSATCMNLLKLPPYKSKAQMEQKLLY
SINAEAGFDLS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcagcggcgatccgtcgactcgtaagcgagtcgatttaggcggtcggagttcg
aaagaaagggataggcagaagcttctggaacaaactaggttagagaggaataagcggttg
cgattgcgccaacaaaacactgcagctactaacatccagaaatgcttcagaggaagaaaa
gtggtggaagcagaacgttcgaaagtccgagaacagtttttcagtgtatatgggaggcac
ttacaaaatgtcgacaggtcttgctttgggcccaattcgaattttcttcgtcaatttctc
tttttcttcaatgccaaaaatgctactgattattctgctcttgtggaagtatgccggctg
cttagacagtttgttcaaaatagcggagatatttatgtcctctttggaggtacagactat
ttgttcgaagatgaatctgtgagttacagggtgaagcgatttgcctatgcttgtatccaa
gcagtttatgagaataggaatcagttgaaggatcaactcattatggcaccttcaggatcc
agtacatcaacaaccctcttactagagtcattagttatgctgattgaaccccaagtttct
tggtcttgtaagattgttgcctttctcttgcagaggaatgtatattatcaaataagggag
attatttttacggcaaagaaaagcacaagttttcaaggtcctgctgccaaagactcgtca
ttggagcatgttcttgtgctcattatgtctcatatggggcaaaaaccatgtatatgtgca
acggatgtacgatggacgttcatatcccagatcctaacaattccattcctatggcaactt
tttccataccttaagaagatttttacaacaaatgatctgagtcaacaatatatccatcat
atgacaatttttgcaaaaggtcctgataaagttctaccagttgacatgtctgctgaattt
cctggttatgcatgcttacttgggaacttattggaagcagctgcacttgctttcgctcgg
cccgactgctcttttgatttggctatggattttacggttgttgcgacatcttttttggag
gaactcgctcccttttacactttaaatacaaaaagtaaagaagcggatgatgatgaaatg
gctattgatgagaaaactaacgacaaagttttgaatgtggatctagaacgacaaatttca
aatgccatagatcctcgttttcttttacagctgacaaatgttttgttcaaaggattttca
cacgccaatggttcatacaaagaaaggcccagtaataaagaagtggctgctgttactgct
gcctgttccttcttgcacgtgactttcaatattctaccccttgagcgcatcatgactgta
ttagcttatagaactgaaataatacctgttctctggaacttcatgaagcgatgccatgaa
aatcaaaattggtcatccttctcagagcattctgcatatttgccaggagatgcacctgga
tggctattgccgttggcagttttttgtcctatatacaagcacatgcttatgattgttgat
aatgaggagttttatgaccaagagaaaccactatcgctaaaggatattagatgcttgatt
gttatcctgagacaggctttatggcagctgttgtggttaaatccttcaatgcctgcaagc
tcagcaaagtctgccaccaatacaaattcattaaggagccggcctgtagaatttatacaa
cacagggttagtattgcagcttctgagcttctgtcccagttgcaagattggaataataga
cggcaatttacaccccctagtgacttccaggctgacggggtcaatgagcacttcaattct
caggccatggttgaaggtagtagagcatatgatgtgctgaaacgagctccattcttggtc
ccttttacaagcagagtgaaaatctttacttcacagctagctgcagcaaaagaaactagt
gattctcatgccgtttttactagaaaccgtttcagaataagacgagaccatatattggaa
gatgcttttagtcagttgagctcattatcagaagaagatcttaaagcagcgattcgagtt
accttcgttaacgaatttggtgttgaagaggctggtattgatggcggtggtatttttaaa
gattttatggagaacatcactcgagcagctttcgacgcacagtacgggctttttaaggaa
acaactgatcacttactctatccgaatcctggatcagcaatggtacatgaacagcatctc
cagtttttccactttcttggaactcttcttgcgaaggcgatgtttgagggtattcttgtg
gatataccctttgcaacatttttcttgagcaagttaaagcagaagtacaactatctgaat
gacttgccttccttggatcctgaattatatcgtcacctcatcttcttaaagcattatgag
ggcgatatatctgagttggaattgtactttgttattgtaaataatgaatacggggagcaa
acagtagaagatctgctacctggagggaagaacttgcgtgttaccaatgaaaatgtcatc
acatttattcatcttgtagcgaatcatcgattgaactaccagatacggcagcaaagttct
catttctttaggggtttccagcaactcattccgaaagattggattgatatatttaacgag
catgaacttcagctgatgatatcaggatcagtagatggctttgatcttgataatcttcgg
tctcatacaaattatgcgggtggttatcatcaagatcactatgtcattgatatgttctgg
gaagttctaaaaagtttttccatggaaaaccagaggaagtttttgaagttcgtgacaggt
tgctctagaggacctttacttggatttaaatatctggaacccttgttctgtatacaaaga
gctggtggtgaggcatctgaagaagcccttgatcggttgccaacatctgctacttgtatg
aatctcttaaagctccccccatataaaagcaaggcacagatggagcagaaattattgtat
tctataaatgctgaggctggtttcgatttgagctga
DBGET
integrated database retrieval system
