Daucus carota (carrot): 108209719
Help
Entry
108209719 CDS
T05350
Name
(RefSeq) ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108209719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108209719
Enzymes [BR:
dcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108209719
DNA repair and recombination proteins [BR:
dcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
108209719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecG_dom3_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108209719
NCBI-ProteinID:
XP_017236268
LinkDB
All DBs
Position
2:complement(33084476..33102726)
Genome browser
AA seq
1047 aa
AA seq
DB search
MALTVSFVQSCSVSFSEKCLRSAIIFEAERGYTNALGRKMRFNSFLFSKVSKLCSRSKHK
FAESLLKEVGSYERASITDRSKLLNKVSILMGYSDLNELFENESVPTISGLNQEAAAGDF
SFARKRFPSIILGQSPKVKLYDENTLHERIDHAAGQICKDFSPSAVNAMWVNPDSFYEAW
PSMASIHKLESLSLRGEDNFNLPSSLDSQTVDNNSVSGSSGTGEIWLSQAASLRVEKSSS
SKEETSYTSPLRANSQTSMAEPKLVPEPLVDDAPSGTTLEIQQTALSVNLFLDKPISFIP
KLSKKHSSQLENCGLHTLRKLLHHFPRTYADLHDAQIGIEDGQYFSFVGKVLSSRGVRAS
FNLSFLEVVVGCEIVEINSTSEQFTDEIDYKKKKTVYLHLMKFFRGTRFTFQPFLKSLQA
KHKEGEIVCVSGKVRSMHAKDHYEMREYNMDVIPDGNASNASGTERPYPIYPSKGGVNPN
ILKSIISRVLQVLPGEIDPIPRNITEEFGLVPLRDAYLGIHQPENIDAADLARRRLIFDD
FFYLQLGRLFQMLEGLRTQIEKDKLLDKYRKPELNVVFAEDWCNLTKHFLGALPYSLTRS
QLNAASEIIWDLKRQIPMYRLLQGDVGCGKTVVAFLACMEVIASGFQAAFMVPTELLAVQ
HYEHLLNLLENMGNEHDKPSVALLTGSTPSKQSRLIREGLRAGNISLVIGTHSLIAEKVE
FLALRIAVVDEQHRFGVIQRGRFNSKLYFNSLSSTLAGNDSSASPKGEYMAPHILAMSAT
PIPRTLALALYGDMSLTQITDLPPGRIPIETCIIEGSESGFSKVYQVMLDELEAGGKIYL
VYPVIELSEQLPQLRAASADFETISSKFRDYNCGLLHGKMKSDEKDEALRRFRSGETHIL
LATQVIEIGVDVPDASMMVVMNAERFGMAQLHQLRGRVGRGVRKSKCILVASSVSSLSRL
KVLESSQDGFHLASMDLILRGPGDLLGKKQSGHLPDFPIARLEIDGNILQDAHAAALETL
GMSHDLEKFPELKAELSMRQPLCILGD
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggctctgactgtctcctttgtgcaatcttgtagtgtgtctttcagtgagaaatgtctg
agaagtgctatcatatttgaagctgagagaggctatacgaatgccttgggaaggaaaatg
aggtttaacagtttccttttctctaaggtttcaaaattgtgctctcgatcaaagcataag
tttgcagaaagcttgttaaaggaggtgggaagttatgagcgcgcaagcattacagaccga
tccaagctgctaaataaggtatctatcctgatgggctacagtgatctaaatgagttattt
gagaatgaaagcgtaccgacaatatctggcttgaaccaagaagctgcagctggtgatttt
agttttgcacgtaaacgttttccttctatcatcttaggtcaatctccaaaagtgaagttg
tatgatgagaacaccctacatgaaaggattgaccatgcagcaggtcagatttgtaaggat
ttctccccaagcgctgtcaatgcaatgtgggttaatcctgatagtttctacgaggcatgg
ccttctatggccagcattcataagttagaatctctttccttgagaggagaagataatttt
aacttaccttcatctttggactctcaaaccgtggataataattcagtttcaggtagtagt
ggcacaggtgaaatatggctttctcaagctgccagccttcgtgttgaaaaatcttcttct
tcaaaggaagaaacatcttatacttctcctttgcgtgcgaactcccagacttcgatggct
gaacctaagctagttccagaacccttggttgatgatgctcccagtggaactacacttgaa
attcagcaaactgctttatcagttaacttatttctggacaaacctataagtttcatccct
aaattgagtaagaagcatagcagtcagttggaaaattgtggtttacacacgctgcgaaag
ctgcttcaccatttccctaggacctatgccgatctacatgatgcacaaataggaatagag
gacgggcagtacttcagctttgttggcaaagttttatcctcaagaggagtgagggctagc
tttaacttatcctttcttgaggttgtagtgggctgtgagattgtggagatcaattcaact
tctgaacagttcacagatgaaattgattacaaaaaaaagaaaactgtttacctacatttg
atgaaattcttccgcgggactcgtttcacatttcagccatttctcaaaagtcttcaggct
aagcataaggagggagaaattgtctgtgttagtggtaaggtgaggtctatgcatgccaaa
gaccactatgagatgagggaatacaatatggatgttattccagatggaaatgcctcaaat
gcttctggaacagagagaccatatccaatttatccttcgaaaggtggcgtaaacccgaat
attcttaaaagtataatctcaagggtgctacaggtcttgcctggcgaaattgatcctatt
ccaagaaatatcactgaggaatttggacttgtacccctccgggatgcttatctaggaata
caccagccagagaacatagatgcggctgatttagctcgtaggaggctcatctttgatgac
ttcttttatcttcagttaggacgtctgttccaaatgcttgagggactcagaacacaaata
gagaaggacaaattgcttgataagtacaggaagcctgaattgaatgtggtttttgctgaa
gactggtgcaatcttaccaagcattttttaggggcccttccgtattcacttacacgtagt
caactgaatgcagcttcagaaattatctgggaccttaagcggcagattcccatgtatcgc
cttttacagggtgatgttggttgtgggaaaactgtggtagctttcttggcatgcatggaa
gtcattgcctcaggttttcaggctgcttttatggttcccaccgagttgcttgcggtccag
cactatgagcaccttcttaatttgctagagaatatggggaatgagcatgacaaaccttct
gttgctttattgactgggtcaacaccatcaaaacagtcacggctaattcgtgagggtctg
cgagccggcaacatctcattggtcattggaactcacagtttgattgcagaaaaagtagaa
ttcttagctttacgcattgctgtggtggacgagcaacaccgttttggtgtgattcagaga
ggaaggttcaacagcaagttatattttaactctctgagttcgacactagctggaaatgat
tcaagtgcctcgcccaagggcgagtatatggctcctcatattctcgctatgtcggctacc
ccaattccaaggacacttgctctggccttgtatggtgatatgtccttgacccaaatcact
gatttacctcctggaaggatacctatagagacatgtattattgaaggaagtgaatctggc
ttttcgaaggtctaccaggttatgttggatgaactagaagcaggaggaaaaatatatctg
gtgtatccggtaattgagctctctgaacagcttcctcaacttcgtgcggcttctgctgat
tttgaaactatatctagtaagttcagagattataattgtgggctgctgcatgggaaaatg
aagagtgacgagaaagatgaagcattgagacgttttagatctggtgaaactcatatactg
ctagctacacaagttatcgagatcggtgtggatgttccagatgcatctatgatggttgtt
atgaatgctgaaagatttggaatggctcaattgcaccaacttagaggacgagtaggtcgt
ggagtgcgaaaatcaaaatgtatactagtagcgtcttccgtcagtagcttaagtcggttg
aaggtgcttgagagctcgcaagatggttttcaccttgcaagcatggatcttattcttcgt
ggacctggtgacttacttggtaagaaacagtcaggacaccttccagattttcctattgcc
agactggagatagatgggaatattctacaagatgcacatgccgccgccttggaaacttta
ggcatgtcccatgatttggagaaattccctgagcttaaagcagaacttagcatgagacag
ccgctttgcattcttggtgattaa
DBGET
integrated database retrieval system
