Daucus carota (carrot): 108213533
Help
Entry
108213533 CDS
T05350
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108213533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108213533
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108213533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
108213533
NCBI-ProteinID:
XP_017240823
UniProt:
A0A169WAI3
LinkDB
All DBs
Position
3:complement(41114471..41117074)
Genome browser
AA seq
377 aa
AA seq
DB search
MSTSVTSSPDFLQGSEFVDYATSPDNFFSILEALDGELMNTIEMAGQEEGGVRVEVENAT
APRLVSQNSAPCLISNDIDVKAPAEARNDLSSPKSNKRKLSSPAEEGQPKISHITVERNR
RKQINDNLNVLRSLMPSFYVKRGDQASIVGGVADYISELQQVLRSLEAKKQRKVYSDVVM
SPRLISSPRTKATTMSSLPISPRKPPLSPRLISSLPASPRTPQSINNNNCSAFNNHLHRL
LVQQLHPSVNNFLLSPTNTMGSSSASLLLEPSPSSSNCSTSSIIDNDQLVANSKSRVADV
EVKFSGPNVILSTVSPRIPGQALKIISALEHLSLEILSVTLNTTDQNTMIYSFTIKIGIE
CKLSAEELAQQIQQTFY
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagtacttcagtaacgtcttcgcctgattttctccaaggctctgaatttgtcgactat
gccacctcgcctgacaacttcttcagcattcttgaagctttagatggcgagttgatgaat
acgatagaaatggctggtcaagaagaaggcggtgttcgtgtagaggtggagaatgcaact
gcacctagattagtttctcaaaattcagcaccttgcttaattagtaacgacatcgatgtt
aaagcacctgctgaagctcgtaatgacttgagctcaccaaagtccaacaaaaggaagctc
agtagtcctgctgaagaagggcagccaaagatttctcatataacagtggagagaaacaga
aggaagcagataaatgacaatttaaatgtcttgcgttcccttatgccttccttttatgtc
aaaaggggtgatcaagcgtcaatagtaggaggggttgcagattacattagtgagttgcaa
caagtcctacgttcactggaggcgaaaaagcagaggaaagtgtacagtgatgttgtcatg
agcccgaggcttatttcaagtccaagaacaaaagcaaccacaatgtcatccttaccaatc
agtccaagaaaacctcctctaagtccaagactgatttcaagcttaccggctagtccaaga
actcctcaatcaatcaacaataacaactgctctgcttttaacaaccacctgcataggtta
ttagtgcaacaactccatccgtcagttaataattttttattatctccgacaaataccatg
ggatcatcctcggcttcattgctacttgaaccttcaccgtcttcttccaattgctcaact
tcgtctatcattgataacgaccaactggttgccaattccaagtccagggttgctgatgtg
gaggtcaagttctccggtccaaatgtgatattaagcactgtttctccaagaatccctggc
caggccctgaagataatatcagcacttgaacatctctcccttgaaattctcagtgttacc
ctcaacactactgatcaaaataccatgatttattccttcactatcaagattggaattgaa
tgcaaactgagtgcggaggaactggctcaacaaattcagcaaacattctactga
DBGET
integrated database retrieval system
