KEGG   Daucus carota (carrot): 108214359
Entry
108214359         CDS       T05350                                 
Name
(RefSeq) chaperone protein ClpB1
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:dcr03110]
    108214359
Chaperones and folding catalysts [BR:dcr03110]
 Heat shock proteins
  HSP100
   108214359
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small Clp_N AAA_5 AAA_16 AAA_22 Sigma54_activat AAA_14 nSTAND3 bpMoxR IstB_IS21 AAA_7 AAA_18 ATPase_2 RuvB_N TniB AAA_28 TsaE NACHT NBD_SMAX1 DUF815 T2SSE RNA_helicase Mg_chelatase Zeta_toxin AAA_25 DNA_pol3_delta2 ResIII AAA_19 DUF2987 DUF87 DASH_Spc19 MoCoBD_1 MPS2
Other DBs
NCBI-GeneID: 108214359
NCBI-ProteinID: XP_017241803
LinkDB
Position
3:complement(15241618..15245549)
AA seq 911 aa
MDPGKFTHKTNEALSGAHELAMNAGHVQFTPLHIAVSLISDPNGIFRQAVANAGGSEEAA
NSVERVLNQALKKIPSQSPAPDQIPASTSLIKVIRRAQSAQKSRGDTHLAVDQLILGLLE
DSQVADLFKEAGVSAAKIKAEVEKLRGKEGKKVESATGDTNFQALKTYGRDLVEQAGKLD
PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLSDVRLI
ALDMGALVAGAKYRGEFEERLKSVLKEVEDADGKVILFIDEIHLVLGAGRAEGSMDAANL
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVLDTINILRGLKERYE
GHHGVRIQDRALVNAAQLSSRYITGRHLPDKAIDLIDEACANVRVQLDSQPEEIDNLERK
RMQLEIELHALEKEKDKVSKARVGEVKKELDDLRDKLQPLMMKYKKEKERIDEIRRLKQK
REELNFAAQEAERRSDLARVADLRYGALMEVESALARLEGNTDENVMLTETVGPEQIAEV
VSRWTGIPVTRLGQNEKDRLIGLADRLHGRVVGQDQAVSAVAEAVLRSRAGLARAQQPTG
SFLFLGPTGVGKTELAKALAEQLFDDDKLLIRIDMSEYMEQHSVARLIGAPPGYVGHEEG
GQLTEAVRRRPYSVVLFDEIEKAHGSVFNTLLQVLDDGRLTDGQGRTVDFTNTVIILTSN
LGAEYLLSGLMGKCTMADARNMVMQEVKRNFKPELLNRLDEIVVFDPLSHDQLRKVARLQ
LKDVASRLAEMGVALGVSESALDVILAESYDPVYGARPIRRWLEKKVVTELSKMLVKAEI
DENSTVYIDADLTGKELSYRVEKNGGLVNAVTGQKSDILIQIPNGPRNEAAQAVKKMRIE
EIEDDDEMDQE
NT seq 2736 nt   +upstreamnt  +downstreamnt
atggatcctggaaaatttacacacaaaacaaatgaagctctgtctggggctcacgagctt
gcgatgaatgcgggccatgtgcaattcactccgcttcatattgcagtgtctctgatctct
gatcctaatggcatttttcgacaagctgtagctaatgctggtggtagtgaggaggcagcg
aattctgttgaaagggttctcaatcaggctctgaaaaagattccctctcagtcacctgca
ccggaccaaattcctgcaagtacttctttgatcaaggttattaggcgagcacaatcagct
cagaagtcgcgaggggatactcatttggcggttgatcagttgattttgggccttttggag
gattctcaggtggctgatctttttaaagaagctggggttagtgcggcgaaaattaaggca
gaggttgagaagcttcgcggaaaggaagggaagaaggtggagagtgctactggggatact
aattttcaggcgctgaagacgtatggacgagaccttgtggagcaagcagggaagcttgat
ccggttattggaagggatgaggagattcggagagttgtaaggattctttcgaggaggact
aagaataatcctgtcctaattggggagcccggagtgggcaaaactgctgttgttgagggt
ttagctcagaggattgttaggggagatgttccgagtaatctttctgatgtgaggctaatt
gcgttggacatgggggctttagttgctggggccaaatatagaggagagtttgaagaaagg
ctgaaatctgtgttgaaagaagttgaagatgctgatgggaaagtgatcctattcattgat
gagattcaccttgttctaggtgctggtcgggcagaagggtcgatggatgcagcgaatttg
ttcaagccaatgcttgcgagagggcagctgcgatgcattggggctacaactttggaggaa
tacaggaaatatgtggaaaaagatgctgcctttgagaggcgtttccaacaagtctatgta
gcagaacctagtgtacttgacacgattaacatcctccggggcctgaaggagaggtatgaa
ggacatcatggtgttcgaattcaggacagagctcttgttaatgcagcacagttgtcaagc
cgatacataactgggagacatttgcctgacaaggcaattgatctaattgatgaagcttgt
gcaaatgtaagggtgcagcttgatagtcagcccgaagaaatagataatctggagaggaag
agaatgcagttagaaattgagcttcatgcccttgagaaagagaaggacaaagttagcaaa
gctcgggttggagaagtgaaaaaggagcttgatgatctacgtgataagcttcagccacta
atgatgaaatacaaaaaggagaaagagaggattgatgagattcgcagactcaagcaaaag
agagaggagctaaattttgcagctcaagaagctgaaaggaggagtgatttggctagggtt
gcagatctgagatacggagcacttatggaagtggagagtgcattagcaaggcttgaaggg
aatacagatgaaaacgtaatgctcacagaaactgttggtccagagcaaattgcagaagtt
gtgagtcggtggactggtattcctgttacaaggctaggacagaatgagaaagacaggttg
attggtcttgctgataggctccacggaagggtggtgggccaagatcaagctgttagtgct
gttgcagaagctgttcttaggtccagggcaggactggcaagggcacagcagccaaccggt
tcattcctcttcttgggtccgactggtgttgggaagacggagcttgctaaggctctcgca
gaacaactctttgacgatgataaacttttgatcaggattgatatgtcagagtatatggag
cagcactcggttgctcgattaattggagctccaccaggctatgttgggcatgaggaaggt
gggcaacttactgaagctgtgaggaggcggccttatagtgttgtactctttgatgaaata
gagaaagctcatggtagtgtttttaatacattacttcaagtattggatgatgggaggtta
acggatggccagggccgcactgtggacttcaccaacactgtgatcatattgacttcgaat
cttggtgctgaatatctcttgtctggattgatgggcaagtgtacaatggctgatgctcgt
aatatggtcatgcaagaagtgaaaagaaactttaagccggagctactaaataggcttgat
gagattgtggtttttgatccactttctcatgatcaactaagaaaggttgctaggcttcag
ttaaaggatgttgctagtcgcctggcggagatgggtgttgctttaggtgtttctgaatca
gcactagatgtcatactcgcagagagttatgatccggtttatggagctaggccgattagg
agatggctagagaagaaagtggtgaccgagttatcaaaaatgcttgtgaaggcggagata
gatgagaactccaccgtgtacatcgatgctgatctaaccggaaaagagctgagctataga
gtggagaagaatggcgggcttgtgaatgccgtcaccggacagaagtccgacatactaatc
caaattcccaatggacctcggaatgaagctgcacaggcagtaaagaagatgagaatcgag
gaaatagaagacgatgatgagatggatcaagagtag

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