Daucus carota (carrot): 108214359
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Entry
108214359 CDS
T05350
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108214359
Chaperones and folding catalysts [BR:
dcr03110
]
Heat shock proteins
HSP100
108214359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_14
nSTAND3
bpMoxR
IstB_IS21
AAA_7
AAA_18
ATPase_2
RuvB_N
TniB
AAA_28
TsaE
NACHT
NBD_SMAX1
DUF815
T2SSE
RNA_helicase
Mg_chelatase
Zeta_toxin
AAA_25
DNA_pol3_delta2
ResIII
AAA_19
DUF2987
DUF87
DASH_Spc19
MoCoBD_1
MPS2
Motif
Other DBs
NCBI-GeneID:
108214359
NCBI-ProteinID:
XP_017241803
LinkDB
All DBs
Position
3:complement(15241618..15245549)
Genome browser
AA seq
911 aa
AA seq
DB search
MDPGKFTHKTNEALSGAHELAMNAGHVQFTPLHIAVSLISDPNGIFRQAVANAGGSEEAA
NSVERVLNQALKKIPSQSPAPDQIPASTSLIKVIRRAQSAQKSRGDTHLAVDQLILGLLE
DSQVADLFKEAGVSAAKIKAEVEKLRGKEGKKVESATGDTNFQALKTYGRDLVEQAGKLD
PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLSDVRLI
ALDMGALVAGAKYRGEFEERLKSVLKEVEDADGKVILFIDEIHLVLGAGRAEGSMDAANL
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVLDTINILRGLKERYE
GHHGVRIQDRALVNAAQLSSRYITGRHLPDKAIDLIDEACANVRVQLDSQPEEIDNLERK
RMQLEIELHALEKEKDKVSKARVGEVKKELDDLRDKLQPLMMKYKKEKERIDEIRRLKQK
REELNFAAQEAERRSDLARVADLRYGALMEVESALARLEGNTDENVMLTETVGPEQIAEV
VSRWTGIPVTRLGQNEKDRLIGLADRLHGRVVGQDQAVSAVAEAVLRSRAGLARAQQPTG
SFLFLGPTGVGKTELAKALAEQLFDDDKLLIRIDMSEYMEQHSVARLIGAPPGYVGHEEG
GQLTEAVRRRPYSVVLFDEIEKAHGSVFNTLLQVLDDGRLTDGQGRTVDFTNTVIILTSN
LGAEYLLSGLMGKCTMADARNMVMQEVKRNFKPELLNRLDEIVVFDPLSHDQLRKVARLQ
LKDVASRLAEMGVALGVSESALDVILAESYDPVYGARPIRRWLEKKVVTELSKMLVKAEI
DENSTVYIDADLTGKELSYRVEKNGGLVNAVTGQKSDILIQIPNGPRNEAAQAVKKMRIE
EIEDDDEMDQE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggaaaatttacacacaaaacaaatgaagctctgtctggggctcacgagctt
gcgatgaatgcgggccatgtgcaattcactccgcttcatattgcagtgtctctgatctct
gatcctaatggcatttttcgacaagctgtagctaatgctggtggtagtgaggaggcagcg
aattctgttgaaagggttctcaatcaggctctgaaaaagattccctctcagtcacctgca
ccggaccaaattcctgcaagtacttctttgatcaaggttattaggcgagcacaatcagct
cagaagtcgcgaggggatactcatttggcggttgatcagttgattttgggccttttggag
gattctcaggtggctgatctttttaaagaagctggggttagtgcggcgaaaattaaggca
gaggttgagaagcttcgcggaaaggaagggaagaaggtggagagtgctactggggatact
aattttcaggcgctgaagacgtatggacgagaccttgtggagcaagcagggaagcttgat
ccggttattggaagggatgaggagattcggagagttgtaaggattctttcgaggaggact
aagaataatcctgtcctaattggggagcccggagtgggcaaaactgctgttgttgagggt
ttagctcagaggattgttaggggagatgttccgagtaatctttctgatgtgaggctaatt
gcgttggacatgggggctttagttgctggggccaaatatagaggagagtttgaagaaagg
ctgaaatctgtgttgaaagaagttgaagatgctgatgggaaagtgatcctattcattgat
gagattcaccttgttctaggtgctggtcgggcagaagggtcgatggatgcagcgaatttg
ttcaagccaatgcttgcgagagggcagctgcgatgcattggggctacaactttggaggaa
tacaggaaatatgtggaaaaagatgctgcctttgagaggcgtttccaacaagtctatgta
gcagaacctagtgtacttgacacgattaacatcctccggggcctgaaggagaggtatgaa
ggacatcatggtgttcgaattcaggacagagctcttgttaatgcagcacagttgtcaagc
cgatacataactgggagacatttgcctgacaaggcaattgatctaattgatgaagcttgt
gcaaatgtaagggtgcagcttgatagtcagcccgaagaaatagataatctggagaggaag
agaatgcagttagaaattgagcttcatgcccttgagaaagagaaggacaaagttagcaaa
gctcgggttggagaagtgaaaaaggagcttgatgatctacgtgataagcttcagccacta
atgatgaaatacaaaaaggagaaagagaggattgatgagattcgcagactcaagcaaaag
agagaggagctaaattttgcagctcaagaagctgaaaggaggagtgatttggctagggtt
gcagatctgagatacggagcacttatggaagtggagagtgcattagcaaggcttgaaggg
aatacagatgaaaacgtaatgctcacagaaactgttggtccagagcaaattgcagaagtt
gtgagtcggtggactggtattcctgttacaaggctaggacagaatgagaaagacaggttg
attggtcttgctgataggctccacggaagggtggtgggccaagatcaagctgttagtgct
gttgcagaagctgttcttaggtccagggcaggactggcaagggcacagcagccaaccggt
tcattcctcttcttgggtccgactggtgttgggaagacggagcttgctaaggctctcgca
gaacaactctttgacgatgataaacttttgatcaggattgatatgtcagagtatatggag
cagcactcggttgctcgattaattggagctccaccaggctatgttgggcatgaggaaggt
gggcaacttactgaagctgtgaggaggcggccttatagtgttgtactctttgatgaaata
gagaaagctcatggtagtgtttttaatacattacttcaagtattggatgatgggaggtta
acggatggccagggccgcactgtggacttcaccaacactgtgatcatattgacttcgaat
cttggtgctgaatatctcttgtctggattgatgggcaagtgtacaatggctgatgctcgt
aatatggtcatgcaagaagtgaaaagaaactttaagccggagctactaaataggcttgat
gagattgtggtttttgatccactttctcatgatcaactaagaaaggttgctaggcttcag
ttaaaggatgttgctagtcgcctggcggagatgggtgttgctttaggtgtttctgaatca
gcactagatgtcatactcgcagagagttatgatccggtttatggagctaggccgattagg
agatggctagagaagaaagtggtgaccgagttatcaaaaatgcttgtgaaggcggagata
gatgagaactccaccgtgtacatcgatgctgatctaaccggaaaagagctgagctataga
gtggagaagaatggcgggcttgtgaatgccgtcaccggacagaagtccgacatactaatc
caaattcccaatggacctcggaatgaagctgcacaggcagtaaagaagatgagaatcgag
gaaatagaagacgatgatgagatggatcaagagtag
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