KEGG   Daucus carota (carrot): 108217729
Entry
108217729         CDS       T05350                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03013  Nucleocytoplasmic transport
dcr03015  mRNA surveillance pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108217729
  09122 Translation
   03013 Nucleocytoplasmic transport
    108217729
   03015 mRNA surveillance pathway
    108217729
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108217729
   03041 Spliceosome [BR:dcr03041]
    108217729
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108217729
Spliceosome [BR:dcr03041]
 Complex C
  Other components
   EJC/TREX
    108217729
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 108217729
NCBI-ProteinID: XP_017246097
LinkDB
Position
4:7321233..7325819
AA seq 152 aa
MAGVVEEEEEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTP
SVLRECRRIISQSEIMKEDDSSWPEPDRVGRQELEIVMGNEHISFTTSKIGSLMDVQTSK
DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 459 nt   +upstreamnt  +downstreamnt
atggcaggagtggtggaagaagaagaggagttttacttgagatactacgtaggtcacaaa
ggcaagttcggtcacgagtttttggaattcgagttcagacccgatggcaaactcagatat
gcaaacaattccaattacaagaatgacactatgattcgtaaggaggtctttcttacgcct
tctgtgctcagagagtgtcgtcgcatcatttcccagagtgagatcatgaaggaagatgat
agcagttggccagaacctgaccgcgttggtaggcaagaacttgaaattgttatgggtaac
gagcatatctcctttactacatcaaaaattgggtcgctcatggatgttcagaccagtaag
gatcctgaagggcttcgtattttctactatcttgttcaggatctgaagtgctttgtattc
tcactcatttctttacacttcaaaatcaaacctatataa

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