Daucus carota (carrot): 108217729
Help
Entry
108217729 CDS
T05350
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
dcr03015
mRNA surveillance pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108217729
09122 Translation
03013 Nucleocytoplasmic transport
108217729
03015 mRNA surveillance pathway
108217729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108217729
03041 Spliceosome [BR:
dcr03041
]
108217729
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108217729
Spliceosome [BR:
dcr03041
]
Complex C
Other components
EJC/TREX
108217729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
108217729
NCBI-ProteinID:
XP_017246097
LinkDB
All DBs
Position
4:7321233..7325819
Genome browser
AA seq
152 aa
AA seq
DB search
MAGVVEEEEEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTP
SVLRECRRIISQSEIMKEDDSSWPEPDRVGRQELEIVMGNEHISFTTSKIGSLMDVQTSK
DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagtggtggaagaagaagaggagttttacttgagatactacgtaggtcacaaa
ggcaagttcggtcacgagtttttggaattcgagttcagacccgatggcaaactcagatat
gcaaacaattccaattacaagaatgacactatgattcgtaaggaggtctttcttacgcct
tctgtgctcagagagtgtcgtcgcatcatttcccagagtgagatcatgaaggaagatgat
agcagttggccagaacctgaccgcgttggtaggcaagaacttgaaattgttatgggtaac
gagcatatctcctttactacatcaaaaattgggtcgctcatggatgttcagaccagtaag
gatcctgaagggcttcgtattttctactatcttgttcaggatctgaagtgctttgtattc
tcactcatttctttacacttcaaaatcaaacctatataa
DBGET
integrated database retrieval system