Daucus carota (carrot): 108222030
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Entry
108222030 CDS
T05350
Name
(RefSeq) meiotic recombination protein SPO11-1-like isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108222030
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
108222030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Motif
Other DBs
NCBI-GeneID:
108222030
NCBI-ProteinID:
XP_063934886
LinkDB
All DBs
Position
5:39069820..39075773
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AA seq
427 aa
AA seq
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MEGNNSISRPSDMLIRIKDFTRSIIKGMCKEQSSFVVHIDRFRNYCTDSSGHCCCSSDTA
KGKELITLQRECHVHRLDVLLRVLLIVQQLLQENKHGSKRDIFYMHPSVFREQSVVDRAI
NDICILLQCSRHNLNVVSVGKGLVMGWLRFSEAGRIFDCINSPNSAHPVPVNVEDVKDIM
SVAKYILIVEKESVFQRLSNDQFCKKNQCIVITGRGYPDVPTRRFLRLIIEKLCLPTYCL
VDCDPYGFDILTTYRFGSMQMAFDAKFLRISNIQWIGVFISDVDRFSLPQHCLLPLTNED
KSRTEALLRRCYLEREVPEWRLELELLMQRGVKFEIEALSAHSLSFLSEVYVPSKIKAEP
STQQLGSATQTKRPSTLGAQPLGTKSPSINREHSFTIVRRTFNLPCILQSINFSQSICPS
FIHFFRN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaacaattcaatctcgcgcccatccgatatgttgatcagaatcaaggatttt
actcgatcgataatcaaaggtatgtgtaaggaacaatcttcttttgttgtgcacattgat
cgattcaggaactactgtactgactcttctggtcactgttgctgcagttctgatacggcc
aagggaaaggagcttataacactacaacgtgaatgtcatgttcatcggctggatgtcttg
ctaagagtgctgctgattgttcagcaacttctgcaagaaaacaagcatggctcaaagagg
gatatattctacatgcatccatctgtttttagagaacagtcggtggttgaccgtgcaatc
aatgacatctgcatccttctgcagtgcagtcgccacaatctgaatgtagtgtctgttggg
aaaggattggtgatgggatggctaagattctcagaagctggaaggatatttgattgcatt
aacagtcccaattctgctcatcctgttccggtgaacgttgaagacgtaaaagatatcatg
agtgttgccaaatatatattgattgtggagaaagaatcagtttttcagcgactatccaat
gatcagttctgcaagaaaaaccagtgtattgtcatcacaggaagaggttatccagatgtt
cccacaagaaggtttctgcggctcatcattgaaaagttgtgcctgcctacatattgctta
gtagattgtgatccatatggctttgacatcttgactacatatcgatttggttcaatgcaa
atggcatttgatgcaaaatttctacgtataagcaatatacaatggattggagtatttatt
tctgatgtggatagatttagtcttccgcaacactgtctacttcctttgaccaatgaagac
aagtcgagaactgaagcattgttgcgtagatgttacttggaaagagaagtgccagaatgg
aggttggagctggagttgctgatgcaaagaggagtcaaatttgagattgaagcattgtca
gcacactcactttctttcttgtcagaggtttatgtgccatctaagattaaagctgaaccc
agtacacaacaactcggatctgcaacgcaaacaaaacgaccctccacacttggagcacaa
cctcttggtaccaaatccccttctatcaaccgtgaacactccttcacaatcgtcagacgg
acattcaatctcccgtgcattctccaaagcataaatttcagtcaaagcatttgtccatct
ttcatacactttttccggaattaa
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